Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G078 Micromonas commoda HOM05D007297 ORTHO05D009352 9.8e-211 736.5 358 100.0
THA.LOC104804081 Tarenaya hassleriana HOM05D007297 ORTHO05D009352 4.8e-24 116.3 316 31.0
Zm00001eb002190 Zea mays HOM05D007297 ORTHO05D009352 1.8e-23 114.4 248 35.9
Ah.01g017630 Amaranthus hybridus HOM05D007297 ORTHO05D009352 1.7e-21 107.8 287 29.6
Os03g0128800 Oryza sativa ssp. japonica HOM05D007297 ORTHO05D009352 1.7e-21 107.8 333 30.0
BraA06t23859Z Brassica rapa HOM05D007027 ORTHO05D008765 3.8e-21 106.7 333 27.9
Pp3c17_19510 Physcomitrium patens HOM05D007297 ORTHO05D009352 6.5e-21 105.9 310 28.7
A06p06480 Brassica napus HOM05D007027 ORTHO05D008765 1.1e-20 105.1 332 27.1
EL10Ac9g21544 Beta vulgaris HOM05D007297 ORTHO05D009352 1.9e-20 104.4 311 26.7
SGA_v2.0_scaffold98G29306 Striga asiatica HOM05D007297 ORTHO05D009352 3.2e-20 103.6 284 29.6
GSVIVG01023865001 Vitis vinifera HOM05D007297 ORTHO05D009352 7.2e-20 102.4 300 27.7
unitig_26.g9984 Utricularia gibba HOM05D007297 ORTHO05D009352 9.4e-20 102.1 271 28.4
Sopen10g027070 Solanum pennellii HOM05D007297 ORTHO05D009352 1.2e-19 101.7 322 29.8
MSTRG.27611 Avicennia marina HOM05D007297 ORTHO05D009352 2.1e-19 100.9 278 29.5
PGSC0003DMG400016829 Solanum tuberosum HOM05D007297 ORTHO05D009352 2.1e-19 100.9 322 30.1
Psat6g204280 Pisum sativum HOM05D007297 ORTHO05D009352 2.7e-19 100.5 281 27.8
Gohir.D01G012700 Gossypium hirsutum HOM05D007297 ORTHO05D009352 4.6e-19 99.8 313 28.4
C05p07890 Brassica napus HOM05D007027 ORTHO05D008765 6.1e-19 99.4 311 25.7
BolC5t29540H Brassica oleracea HOM05D007027 ORTHO05D008765 6.1e-19 99.4 311 25.7
Gorai.002G014500 Gossypium raimondii HOM05D007297 ORTHO05D009352 6.1e-19 99.4 313 28.4
CBR_g49409 Chara braunii HOM05D001007 ORTHO05D008005 1.0e-18 98.6 227 31.3
Solyc10g074580.2 Solanum lycopersicum HOM05D007297 ORTHO05D009352 1.0e-18 98.6 322 29.2
AagrBONN_evm.TU.Sc2ySwM_117.3353 Anthoceros agrestis HOM05D007297 ORTHO05D009352 1.4e-18 98.2 307 29.0
CANSAT25G3874 Cannabis sativa HOM05D007297 ORTHO05D009352 1.4e-18 98.2 268 29.5
Thecc.02G146900 Theobroma cacao HOM05D007297 ORTHO05D009352 1.4e-18 98.2 316 27.8
SalBow5G0092 Salvia bowleyana HOM05D007297 ORTHO05D009352 3.0e-18 97.1 347 27.4
Nn5g31034 Nelumbo nucifera HOM05D007297 ORTHO05D009352 3.9e-18 96.7 304 26.6
Nitab4.5_0001700g0150 Nicotiana tabacum HOM05D007297 ORTHO05D009352 3.9e-18 96.7 281 29.5
Ca_10853_v3 Cicer arietinum L. HOM05D007297 ORTHO05D009352 5.1e-18 96.3 277 26.7
Ciclev10028691m.g Citrus clementina HOM05D007297 ORTHO05D009352 5.1e-18 96.3 341 26.4
Mapoly0005s0259 Marchantia polymorpha HOM05D007297 ORTHO05D009352 8.8e-18 95.5 334 29.9
Potri.004G207400 Populus trichocarpa HOM05D007297 ORTHO05D009352 8.8e-18 95.5 299 27.4
Eucgr.H04994 Eucalyptus grandis HOM05D007297 ORTHO05D009352 1.1e-17 95.1 299 29.8
Gohir.A01G011500 Gossypium hirsutum HOM05D007297 ORTHO05D009352 1.1e-17 95.1 313 28.1
PGR042G0917 Punica granatum HOM05D007297 ORTHO05D009352 1.1e-17 95.1 306 27.8
SalBow5G1065 Salvia bowleyana HOM05D007297 ORTHO05D009352 1.1e-17 95.1 281 29.5
Aqoxy5G00964 Aquilegia oxysepala HOM05D007297 ORTHO05D009352 2.0e-17 94.4 340 27.6
Duzib132G0252 Durio zibethinus HOM05D007297 ORTHO05D009352 2.0e-17 94.4 380 25.3
Thhalv10025549m.g Eutrema salsugineum HOM05D007297 ORTHO05D009352 3.3e-17 93.6 329 28.6
Manes.15G114700 Manihot esculenta HOM05D007297 ORTHO05D009352 3.3e-17 93.6 290 29.3
CARHR294010 Cardamine hirsuta HOM05D007297 ORTHO05D009352 7.4e-17 92.4 295 29.5
CiPaw.05G093700 Carya illinoinensis HOM05D007297 ORTHO05D009352 7.4e-17 92.4 276 26.8
Medtr1g102880 Medicago truncatula HOM05D007297 ORTHO05D009352 7.4e-17 92.4 276 26.4
AUR62010181 Chenopodium quinoa HOM05D007297 ORTHO05D009352 9.7e-17 92.0 274 27.7
DCAR_006267 Daucus carota HOM05D007297 ORTHO05D009352 9.7e-17 92.0 274 28.1
Migut.N01363 Erythranthe guttata HOM05D007297 ORTHO05D009352 9.7e-17 92.0 344 26.7
Sp7g37510 Schrenkiella parvula HOM05D007297 ORTHO05D009352 9.7e-17 92.0 271 27.7
arahy.Tifrunner.gnm1.ann1.F5MDAV Arachis hypogaea HOM05D007297 ORTHO05D009352 1.7e-16 91.3 257 28.4
AUR62013182 Chenopodium quinoa HOM05D007297 ORTHO05D009352 1.7e-16 91.3 274 28.1
Cre12.g554600 Chlamydomonas reinhardtii HOM05D007297 ORTHO05D009352 1.7e-16 91.3 319 28.2
RcHm_v2.0_Chr6g0281021 Rosa chinensis HOM05D007297 ORTHO05D009352 1.7e-16 91.3 273 27.1
Carub.0007s0016 Capsella rubella HOM05D007297 ORTHO05D009352 2.2e-16 90.9 324 26.2
Hund06358 Selenicereus undatus HOM05D007297 ORTHO05D009352 2.8e-16 90.5 268 27.6
PSO170G5512 Papaver somniferum HOM05D007297 ORTHO05D009352 3.7e-16 90.1 328 26.2
TWI79G0145 Tripterygium wilfordii HOM05D007297 ORTHO05D009352 3.7e-16 90.1 331 26.6
Lj5g0024553 Lotus japonicus HOM05D007297 ORTHO05D009352 4.8e-16 89.7 315 25.4
AT4G38225 Arabidopsis thaliana HOM05D007297 ORTHO05D009352 6.3e-16 89.4 326 27.0
Peaxi162Scf00374g00734 Petunia axillaris HOM05D007297 ORTHO05D009352 6.3e-16 89.4 343 26.2
arahy.Tifrunner.gnm1.ann1.114EL0 Arachis hypogaea HOM05D007297 ORTHO05D009352 8.2e-16 89.0 274 27.7
AL7G10130 Arabidopsis lyrata HOM05D002051 ORTHO05D002041 1.1e-15 88.6 328 27.1
Oeu032716.1 Olea europaea HOM05D007297 ORTHO05D009352 1.4e-15 88.2 266 27.8
QL11p056524 Quercus lobata HOM05D007297 ORTHO05D009352 1.4e-15 88.2 269 26.4
MD10G1142400 Malus domestica HOM05D007297 ORTHO05D009352 1.8e-15 87.8 270 26.7
CSS0008013 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 4.1e-15 86.7 275 26.2
COL.COLO4_33139 Corchorus olitorius HOM05D007297 ORTHO05D009352 4.1e-15 86.7 258 28.3
CsaV3_7G002000 Cucumis sativus L. HOM05D007297 ORTHO05D009352 4.1e-15 86.7 279 27.2
ClCG02G003330 Citrullus lanatus HOM05D007297 ORTHO05D009352 5.3e-15 86.3 270 27.8
MELO3C015706.2 Cucumis melo HOM05D007297 ORTHO05D009352 5.3e-15 86.3 279 26.9
HanXRQChr16g0515151 Helianthus annuus HOM05D007297 ORTHO05D009352 5.3e-15 86.3 325 28.3
TAR381G0094 Trochodendron aralioides HOM05D007297 ORTHO05D009352 6.9e-15 85.9 274 27.7
Cc09_g10870 Coffea canephora HOM05D007297 ORTHO05D009352 9.1e-15 85.5 304 26.6
Sed0028195 Sechium edule HOM05D007297 ORTHO05D009352 1.2e-14 85.1 272 26.5
Sc18g0005810 Simmondsia chinensis HOM05D007297 ORTHO05D009352 1.2e-14 85.1 272 27.9
Phvul.007G061600 Phaseolus vulgaris HOM05D007297 ORTHO05D009352 1.5e-14 84.7 271 25.8
vmacro23445 Vaccinium macrocarpon HOM05D007297 ORTHO05D009352 1.5e-14 84.7 277 26.0
Glyma.10G244200 Glycine max HOM05D007297 ORTHO05D009352 2.6e-14 84.0 278 24.1
ATR0807G066 Amborella trichopoda HOM05D007297 ORTHO05D009352 3.4e-14 83.6 277 26.7
FAN15G2550 Fragaria x ananassa HOM05D007297 ORTHO05D009352 4.5e-14 83.2 298 25.5
Rhsim05G0044900 Rhododendron simsii HOM05D007297 ORTHO05D009352 4.5e-14 83.2 248 29.8
FvH4_2g16900 Fragaria vesca HOM05D007297 ORTHO05D009352 5.9e-14 82.8 303 25.4
CDE05G3233 Ceratophyllum demersum HOM05D007297 ORTHO05D009352 7.7e-14 82.4 226 29.2
Dinv14179 Davidia involucrata HOM05D007297 ORTHO05D009352 7.7e-14 82.4 323 26.0
FAN27G2312 Fragaria x ananassa HOM05D007297 ORTHO05D009352 1.3e-13 81.6 328 24.7
Cfa010687 Carpinus fangiana HOM05D007297 ORTHO05D009352 1.7e-13 81.3 319 25.7
Cpa.g.sc60.2 Carica papaya HOM05D007297 ORTHO05D009352 2.2e-13 80.9 182 30.8
MBI05_g18176_MAGBIO Magnolia biondii HOM05D007297 ORTHO05D009352 2.2e-13 80.9 274 25.9
Aa31LG6G16890 Aethionema arabicum HOM05D007297 ORTHO05D009352 2.9e-13 80.5 258 28.7
Prupe.8G180900 Prunus persica HOM05D007297 ORTHO05D009352 2.9e-13 80.5 275 26.5
VMungo0720G0116 Vigna mungo HOM05D007297 ORTHO05D009352 2.9e-13 80.5 269 26.0
Lsat_1_v5_gn_8_120880 Lactuca sativa HOM05D007297 ORTHO05D009352 3.8e-13 80.1 309 26.5
MD05G1140800 Malus domestica HOM05D007297 ORTHO05D009352 6.5e-13 79.3 361 25.5
Actinidia32005 Actinidia chinensis HOM05D007297 ORTHO05D009352 1.1e-12 78.6 316 25.6
SMO356G0187 Selaginella moellendorffii HOM05D007297 ORTHO05D009352 3.2e-12 77.0 194 29.4
ECA233G4247 Erigeron canadensis HOM05D007297 ORTHO05D009352 9.4e-12 75.5 316 24.7
MD11G1100600 Malus domestica HOM05D007297 ORTHO05D009352 2.7e-11 73.9 99 40.4
MD05G1140400 Malus domestica HOM05D007297 ORTHO05D009352 3.6e-11 73.6 259 25.9
Pp3c2_4700 Physcomitrium patens HOM05D007297 ORTHO05D009352 3.9e-10 70.1 271 25.1
HPP92_012647 Vanilla planifolia HOM05D007297 ORTHO05D009352 2.8e-08 63.9 276 25.0
CSS0007337 Camellia sinensis var. sinensis HOM05D007297 ORTHO05D009352 7.0e-07 59.3 252 25.4
Lj9A408T85 Lonicera japonica HOM05D007297 ORTHO05D009352 4.5e-06 56.6 227 25.1


User provided reference genes

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