Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO13G030 Micromonas commoda HOM05D006499 ORTHO05D007874 1.3e-122 443.0 214 100.0
MCO09G426 Micromonas commoda HOM05D006499 ORTHO05D007874 1.7e-53 213.4 214 48.6
Cre10.g448500 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 7.5e-49 198.0 207 45.9
MCO09G247 Micromonas commoda HOM05D006499 ORTHO05D007874 1.9e-15 87.0 179 33.0
CBR_g58794 Chara braunii HOM05D013626 ORTHO05D007874 2.1e-14 83.6 149 34.9
ATR0618G206 Amborella trichopoda HOM05D006499 ORTHO05D007874 7.8e-14 81.6 177 28.2
SMO116G0488 Selaginella moellendorffii HOM05D006499 ORTHO05D007874 1.3e-13 80.9 178 32.6
Cre17.g706800 Chlamydomonas reinhardtii HOM05D006499 ORTHO05D007874 3.3e-12 76.3 181 29.8
HPP92_005057 Vanilla planifolia HOM05D006499 ORTHO05D007874 5.6e-12 75.5 177 28.8
AagrBONN_evm.TU.Sc2ySwM_344.3677 Anthoceros agrestis HOM05D006499 ORTHO05D007874 9.6e-12 74.7 200 28.0
DCAR_026894 Daucus carota HOM05D006499 ORTHO05D007874 1.6e-11 73.9 177 27.7
Pp3s30_567 Physcomitrium patens HOM05D006499 ORTHO05D007874 1.6e-11 73.9 170 28.2
Pp3s30_680 Physcomitrium patens HOM05D006499 ORTHO05D007874 1.6e-11 73.9 174 27.0
arahy.Tifrunner.gnm1.ann1.17ZCGM Arachis hypogaea HOM05D005658 ORTHO05D006989 2.4e-10 70.1 181 31.5
TAR622G1217 Trochodendron aralioides HOM05D006499 ORTHO05D007874 3.1e-10 69.7 178 28.1
Rhsim12G0201100 Rhododendron simsii HOM05D005658 ORTHO05D006989 5.2e-10 68.9 182 30.2
Lsat_1_v5_gn_8_80081 Lactuca sativa HOM05D006499 ORTHO05D007874 6.9e-10 68.6 177 27.1
arahy.Tifrunner.gnm1.ann1.5XEL3K Arachis hypogaea HOM05D005658 ORTHO05D006989 8.9e-10 68.2 181 29.8
Migut.H01291 Erythranthe guttata HOM05D006499 ORTHO05D007874 8.9e-10 68.2 175 27.4
CARHR091380 Cardamine hirsuta HOM05D005658 ORTHO05D006989 1.5e-09 67.4 174 29.3
Manes.04G130900 Manihot esculenta HOM05D005658 ORTHO05D006989 2.0e-09 67.0 173 31.2
vmacro16973 Vaccinium macrocarpon HOM05D005658 ORTHO05D006989 2.6e-09 66.6 187 30.5
Zm00001eb076800 Zea mays HOM05D006499 ORTHO05D007874 2.6e-09 66.6 179 29.6
Ca_20421_v3 Cicer arietinum L. HOM05D005658 ORTHO05D006989 3.4e-09 66.2 181 29.3
Lalb_Chr04g0262841 Lupinus albus HOM05D005658 ORTHO05D006989 3.4e-09 66.2 187 30.5
MBI06_g20294_MAGBIO Magnolia biondii HOM05D006499 ORTHO05D007874 3.4e-09 66.2 180 29.4
unitig_578.g16567 Utricularia gibba HOM05D006499 ORTHO05D007874 3.4e-09 66.2 160 27.5
Cpa.g.sc92.93 Carica papaya HOM05D006499 ORTHO05D007874 5.8e-09 65.5 177 28.2
CiPaw.01G234800 Carya illinoinensis HOM05D005658 ORTHO05D006989 5.8e-09 65.5 174 29.3
CsaV3_5G006120 Cucumis sativus L. HOM05D000045 ORTHO05D007874 7.6e-09 65.1 176 26.7
Sp2g23920 Schrenkiella parvula HOM05D006499 ORTHO05D007874 7.6e-09 65.1 179 27.4
Actinidia13714 Actinidia chinensis HOM05D006499 ORTHO05D007874 9.9e-09 64.7 173 28.9
Glyma.07G018600 Glycine max HOM05D005658 ORTHO05D006989 9.9e-09 64.7 182 30.8
Lj5g0010105 Lotus japonicus HOM05D005658 ORTHO05D006989 9.9e-09 64.7 178 30.3
Os04g0525800 Oryza sativa ssp. japonica HOM05D006499 ORTHO05D007874 9.9e-09 64.7 179 27.9
Psat7g255000 Pisum sativum HOM05D005658 ORTHO05D006989 9.9e-09 64.7 186 30.1
Sp3g14560 Schrenkiella parvula HOM05D005658 ORTHO05D006989 9.9e-09 64.7 174 29.3
Solyc01g007920.2 Solanum lycopersicum HOM05D006499 ORTHO05D007874 9.9e-09 64.7 175 29.1
Cfa021425 Carpinus fangiana HOM05D006499 ORTHO05D007874 1.7e-08 63.9 213 27.2
ClCG02G014040 Citrullus lanatus HOM05D006499 ORTHO05D007874 1.7e-08 63.9 176 27.3
Lj5g0006747 Lotus japonicus HOM05D005658 ORTHO05D006989 1.7e-08 63.9 178 30.9
Manes.15G079500 Manihot esculenta HOM05D006499 ORTHO05D007874 1.7e-08 63.9 204 26.0
Os02g0276400 Oryza sativa ssp. japonica HOM05D005658 ORTHO05D006989 1.7e-08 63.9 179 29.1
Sed0001124 Sechium edule HOM05D006499 ORTHO05D007874 1.7e-08 63.9 176 29.0
Sed0023183 Sechium edule HOM05D005658 ORTHO05D006989 1.7e-08 63.9 171 29.8
Sopen01g003460 Solanum pennellii HOM05D006499 ORTHO05D007874 1.7e-08 63.9 175 28.6
BraA02t09053Z Brassica rapa HOM05D006499 ORTHO05D007874 2.2e-08 63.5 179 25.7
Nn4g24968 Nelumbo nucifera HOM05D006499 ORTHO05D007874 2.2e-08 63.5 175 27.4
Phvul.010G147700 Phaseolus vulgaris HOM05D005658 ORTHO05D006989 2.2e-08 63.5 181 29.3
Potri.003G051700 Populus trichocarpa HOM05D005658 ORTHO05D006989 2.2e-08 63.5 174 31.0
Rhsim05G0006600 Rhododendron simsii HOM05D006499 ORTHO05D007874 2.2e-08 63.5 161 28.0
HPP92_003927 Vanilla planifolia HOM05D005658 ORTHO05D006989 2.2e-08 63.5 173 28.3
Mapoly0052s0007 Marchantia polymorpha HOM05D005658 ORTHO05D006989 2.9e-08 63.2 184 28.8
TPR.G38603 Trifolium pratense HOM05D005658 ORTHO05D006989 2.9e-08 63.2 182 30.8
MSTRG.12232 Avicennia marina HOM05D006499 ORTHO05D007874 3.8e-08 62.8 175 28.6
COL.COLO4_33044 Corchorus olitorius HOM05D006499 ORTHO05D007874 3.8e-08 62.8 174 27.6
Prupe.1G348500 Prunus persica HOM05D006499 ORTHO05D007874 3.8e-08 62.8 176 26.7
BcaB07g29862 Brassica carinata HOM05D006499 ORTHO05D007874 4.9e-08 62.4 179 26.8
CSS0031663 Camellia sinensis var. sinensis HOM05D005658 ORTHO05D006989 4.9e-08 62.4 176 29.5
CANSAT56G4082 Cannabis sativa HOM05D005658 ORTHO05D006989 4.9e-08 62.4 174 28.2
CiPaw.06G061000 Carya illinoinensis HOM05D006499 ORTHO05D007874 4.9e-08 62.4 177 26.6
Thhalv10005281m.g Eutrema salsugineum HOM05D006499 ORTHO05D007874 4.9e-08 62.4 179 26.3
Peaxi162Scf00021g01915 Petunia axillaris HOM05D006499 ORTHO05D007874 4.9e-08 62.4 177 30.5
Pp3c12_9010 Physcomitrium patens HOM05D006499 ORTHO05D007874 4.9e-08 62.4 163 25.8
VMungo0331G1814 Vigna mungo HOM05D005658 ORTHO05D006989 4.9e-08 62.4 178 29.2
arahy.Tifrunner.gnm1.ann1.U0P7JC Arachis hypogaea HOM05D000717 ORTHO05D000555 6.4e-08 62.0 178 30.3
A02p41090 Brassica napus HOM05D006499 ORTHO05D007874 6.4e-08 62.0 179 25.1
QL05p021437 Quercus lobata HOM05D005658 ORTHO05D006989 6.4e-08 62.0 171 29.8
PGSC0003DMG400016411 Solanum tuberosum HOM05D006499 ORTHO05D007874 8.4e-08 61.6 160 28.8
Oeu012342.1 Olea europaea HOM05D006499 ORTHO05D007874 1.1e-07 61.2 175 29.1
SGA_v2.0_scaffold49G18416 Striga asiatica HOM05D006499 ORTHO05D007874 1.1e-07 61.2 175 28.6
MELO3C011747.2 Cucumis melo HOM05D000045 ORTHO05D007874 1.9e-07 60.5 176 26.1
vmacro04318 Vaccinium macrocarpon HOM05D006499 ORTHO05D007874 1.9e-07 60.5 161 26.7
Nitab4.5_0000069g0350 Nicotiana tabacum HOM05D006499 ORTHO05D007874 2.4e-07 60.1 175 27.4
Pp3c13_4590 Physcomitrium patens HOM05D005658 ORTHO05D006989 2.4e-07 60.1 171 28.1
Sc06g0006830 Simmondsia chinensis HOM05D006499 ORTHO05D007874 2.4e-07 60.1 161 28.0
THA.LOC104800852 Tarenaya hassleriana HOM05D006499 ORTHO05D007874 2.4e-07 60.1 180 27.2
unitig_746.g26661 Utricularia gibba HOM05D005658 ORTHO05D006989 2.4e-07 60.1 180 28.3
AL3G28880 Arabidopsis lyrata HOM05D005658 ORTHO05D006989 3.2e-07 59.7 172 29.1
C02p60950 Brassica napus HOM05D006499 ORTHO05D007874 3.2e-07 59.7 179 24.6
BolC2t12145H Brassica oleracea HOM05D006499 ORTHO05D007874 3.2e-07 59.7 179 24.6
Duzib132G0016 Durio zibethinus HOM05D006499 ORTHO05D007874 3.2e-07 59.7 177 26.0
Eucgr.J02954 Eucalyptus grandis HOM05D005658 ORTHO05D006989 3.2e-07 59.7 171 30.4
Thhalv10021560m.g Eutrema salsugineum HOM05D005658 ORTHO05D006989 3.2e-07 59.7 174 27.6
QL03p017736 Quercus lobata HOM05D006499 ORTHO05D007874 3.2e-07 59.7 176 26.7
RcHm_v2.0_Chr2g0139251 Rosa chinensis HOM05D005658 ORTHO05D006989 3.2e-07 59.7 171 26.9
Prupe.3G064800 Prunus persica HOM05D005658 ORTHO05D006989 4.2e-07 59.3 171 29.2
RcHm_v2.0_Chr4g0446811 Rosa chinensis HOM05D006499 ORTHO05D007874 4.2e-07 59.3 179 27.4
AT5G23230 Arabidopsis thaliana HOM05D006499 ORTHO05D007874 5.4e-07 58.9 179 26.8
BcaC03g18032 Brassica carinata HOM05D006499 ORTHO05D007874 5.4e-07 58.9 179 24.6
Carub.0006s2100 Capsella rubella HOM05D006499 ORTHO05D007874 5.4e-07 58.9 179 25.7
FAN07G1092 Fragaria x ananassa HOM05D006499 ORTHO05D007874 5.4e-07 58.9 179 25.7
MD09G1208600 Malus domestica HOM05D005658 ORTHO05D006989 5.4e-07 58.9 171 28.1
Sabra03G0027300 Salix brachista HOM05D005658 ORTHO05D006989 5.4e-07 58.9 173 29.5
arahy.Tifrunner.gnm1.ann1.BULB93 Arachis hypogaea HOM05D006499 ORTHO05D007874 7.1e-07 58.5 178 29.2
AUR62032973 Chenopodium quinoa HOM05D006499 ORTHO05D007874 7.1e-07 58.5 186 26.9
Cc02_g20760 Coffea canephora HOM05D006499 ORTHO05D007874 7.1e-07 58.5 176 26.1
BcaC09g48588 Brassica carinata HOM05D005658 ORTHO05D006989 9.3e-07 58.2 174 29.3
AUR62017708 Chenopodium quinoa HOM05D006499 ORTHO05D007874 9.3e-07 58.2 155 27.1
QL03p017519 Quercus lobata HOM05D006499 ORTHO05D007874 9.3e-07 58.2 176 26.1
SMO147G0229 Selaginella moellendorffii HOM05D005658 ORTHO05D006989 9.3e-07 58.2 178 28.1
CSS0024171 Camellia sinensis var. sinensis HOM05D006499 ORTHO05D007874 1.2e-06 57.8 81 37.0
MD16G1003500 Malus domestica HOM05D006499 ORTHO05D007874 1.2e-06 57.8 180 26.7
Oeu029646.1 Olea europaea HOM05D005658 ORTHO05D006989 1.2e-06 57.8 178 28.7
GSVIVG01017054001 Vitis vinifera HOM05D005658 ORTHO05D006989 1.2e-06 57.8 171 28.7
Lalb_Chr04g0258971 Lupinus albus HOM05D006499 ORTHO05D007874 1.6e-06 57.4 178 25.8
ECA236G1709 Erigeron canadensis HOM05D006499 ORTHO05D007874 2.1e-06 57.0 177 22.6
Aqoxy3G00285 Aquilegia oxysepala HOM05D006499 ORTHO05D007874 2.7e-06 56.6 177 23.2
CARHR190310 Cardamine hirsuta HOM05D006499 ORTHO05D007874 2.7e-06 56.6 179 27.4
Nitab4.5_0004301g0030 Nicotiana tabacum HOM05D006499 ORTHO05D007874 2.7e-06 56.6 175 28.0
Thecc.02G158700 Theobroma cacao HOM05D006499 ORTHO05D007874 2.7e-06 56.6 177 25.4
CBR_g58795 Chara braunii HOM05D006499 ORTHO05D007874 3.5e-06 56.2 100 34.0
Cre16.g674650 Chlamydomonas reinhardtii HOM05D005658 ORTHO05D006989 3.5e-06 56.2 182 26.4
Haze_11761 Corylus avellana HOM05D006499 ORTHO05D007874 3.5e-06 56.2 177 26.0
AagrBONN_evm.TU.Sc2ySwM_369.407 Anthoceros agrestis HOM05D002948 ORTHO05D003577 4.6e-06 55.8 172 28.5
Lj6P712T24 Lonicera japonica HOM05D006499 ORTHO05D007874 4.6e-06 55.8 142 26.8
Ciclev10032745m.g Citrus clementina HOM05D006499 ORTHO05D007874 6.0e-06 55.5 178 26.4
FAN02G2498 Fragaria x ananassa HOM05D005658 ORTHO05D006989 6.0e-06 55.5 171 26.9
FAN14G0081 Fragaria x ananassa HOM05D005658 ORTHO05D006989 6.0e-06 55.5 171 28.1
Sed0000814 Sechium edule HOM05D005658 ORTHO05D006989 6.0e-06 55.5 174 27.6
A05p33310 Brassica napus HOM05D005658 ORTHO05D006989 7.8e-06 55.1 175 29.1
CDE08G1506 Ceratophyllum demersum HOM05D005658 ORTHO05D006989 7.8e-06 55.1 172 29.1
FvH4_6g31890 Fragaria vesca HOM05D005658 ORTHO05D006989 7.8e-06 55.1 171 28.1


User provided reference genes

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