Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G445 Micromonas commoda HOM05D007044 ORTHO05D008981 0.0e+00 1493.4 775 100.0
GSVIVG01000252001 Vitis vinifera HOM05D007044 ORTHO05D008981 5.5e-33 147.1 606 26.4
SGA_v2.0_scaffold13G06483 Striga asiatica HOM05D007044 ORTHO05D008981 1.6e-32 145.6 642 25.4
Sp5g05990 Schrenkiella parvula HOM05D007044 ORTHO05D008981 2.3e-31 141.7 554 27.1
AL5G37940 Arabidopsis lyrata HOM05D007044 ORTHO05D008981 5.1e-31 140.6 579 26.4
PGR119G1191 Punica granatum HOM05D007044 ORTHO05D008981 2.0e-30 138.7 616 26.1
AT3G56570 Arabidopsis thaliana HOM05D007044 ORTHO05D008981 2.5e-30 138.3 623 26.8
A09p49450 Brassica napus HOM05D007044 ORTHO05D008981 2.5e-30 138.3 586 25.9
BraA09t40398Z Brassica rapa HOM05D007044 ORTHO05D008981 2.5e-30 138.3 586 25.9
C08p31830 Brassica napus HOM05D007044 ORTHO05D008981 3.3e-30 137.9 588 26.2
Ciclev10027575m.g Citrus clementina HOM05D007044 ORTHO05D008981 7.4e-30 136.7 403 28.5
EL10Ac4g09721 Beta vulgaris HOM05D007044 ORTHO05D008981 4.8e-29 134.0 623 27.1
Cfa020928 Carpinus fangiana HOM05D007044 ORTHO05D008981 6.3e-29 133.7 608 26.2
Carub.0005s2331 Capsella rubella HOM05D007044 ORTHO05D008981 1.1e-28 132.9 636 24.2
Haze_19360 Corylus avellana HOM05D007044 ORTHO05D008981 1.8e-28 132.1 404 29.5
Ca_09906_v3 Cicer arietinum L. HOM05D007044 ORTHO05D008981 2.4e-28 131.7 600 25.2
Os01g0879500 Oryza sativa ssp. japonica HOM05D007044 ORTHO05D008981 2.4e-28 131.7 393 27.7
TWI75G1760 Tripterygium wilfordii HOM05D007044 ORTHO05D008981 2.4e-28 131.7 404 28.2
AUR62000601 Chenopodium quinoa HOM05D007044 ORTHO05D008981 4.1e-28 131.0 405 28.9
Lj5g0011072 Lotus japonicus HOM05D007044 ORTHO05D008981 6.9e-28 130.2 597 24.3
CSS0017775 Camellia sinensis var. sinensis HOM05D007044 ORTHO05D008981 9.1e-28 129.8 480 26.0
ClCG04G002800 Citrullus lanatus HOM05D007044 ORTHO05D008981 1.2e-27 129.4 604 25.8
Ah.02g118170 Amaranthus hybridus HOM05D007044 ORTHO05D008981 1.5e-27 129.0 394 29.9
Migut.F00913 Erythranthe guttata HOM05D007044 ORTHO05D008981 1.5e-27 129.0 600 28.0
Sed0003346 Sechium edule HOM05D007044 ORTHO05D008981 2.6e-27 128.3 594 25.8
Lj7A490G62 Lonicera japonica HOM05D007044 ORTHO05D008981 3.4e-27 127.9 607 24.5
THA.LOC104827319 Tarenaya hassleriana HOM05D007044 ORTHO05D008981 3.4e-27 127.9 358 29.3
BcaC07g40141 Brassica carinata HOM05D007044 ORTHO05D008981 5.9e-27 127.1 590 25.6
Gohir.A05G375000 Gossypium hirsutum HOM05D007044 ORTHO05D008981 5.9e-27 127.1 401 27.7
BcaC07g39965 Brassica carinata HOM05D007044 ORTHO05D008981 1.0e-26 126.3 588 25.2
BolC8t50802H Brassica oleracea HOM05D007044 ORTHO05D008981 1.0e-26 126.3 588 25.2
MELO3C024642.2 Cucumis melo HOM05D007044 ORTHO05D008981 2.2e-26 125.2 592 25.8
Gorai.012G045900 Gossypium raimondii HOM05D007044 ORTHO05D008981 8.5e-26 123.2 585 25.0
Gohir.D04G040700 Gossypium hirsutum HOM05D007044 ORTHO05D008981 1.1e-25 122.9 374 28.6
AUR62006952 Chenopodium quinoa HOM05D007044 ORTHO05D008981 1.4e-25 122.5 527 25.6
TPR.G16624 Trifolium pratense HOM05D007044 ORTHO05D008981 1.4e-25 122.5 397 26.7
Medtr1g077040 Medicago truncatula HOM05D007044 ORTHO05D008981 2.5e-25 121.7 394 26.6
Psat6g111960 Pisum sativum HOM05D007044 ORTHO05D008981 2.5e-25 121.7 401 27.2
vmacro05323 Vaccinium macrocarpon HOM05D007044 ORTHO05D008981 2.5e-25 121.7 638 25.4
VMungo0720G2193 Vigna mungo HOM05D007044 ORTHO05D008981 4.2e-25 120.9 611 25.0
Actinidia19938 Actinidia chinensis HOM05D007044 ORTHO05D008981 7.2e-25 120.2 575 23.3
Duzib147G1221 Durio zibethinus HOM05D007044 ORTHO05D008981 7.2e-25 120.2 613 25.1
Aa31LG10G11390 Aethionema arabicum HOM05D007044 ORTHO05D008981 9.4e-25 119.8 604 25.5
Manes.13G154300 Manihot esculenta HOM05D007044 ORTHO05D008981 9.4e-25 119.8 582 25.6
SMO169G0173 Selaginella moellendorffii HOM05D007044 ORTHO05D008981 1.2e-24 119.4 405 27.4
Aqoxy6G00095 Aquilegia oxysepala HOM05D007044 ORTHO05D008981 1.6e-24 119.0 354 28.5
PSO782G5479 Papaver somniferum HOM05D007044 ORTHO05D008981 1.6e-24 119.0 391 26.6
SalBow6G1252 Salvia bowleyana HOM05D007044 ORTHO05D008981 1.6e-24 119.0 647 25.5
arahy.Tifrunner.gnm1.ann1.H6ML7T Arachis hypogaea HOM05D007044 ORTHO05D008981 2.1e-24 118.6 402 27.1
PSO170G6074 Papaver somniferum HOM05D007044 ORTHO05D008981 2.1e-24 118.6 397 28.7
Zm00001eb366280 Zea mays HOM05D007044 ORTHO05D008981 2.7e-24 118.2 358 26.8
Lalb_Chr06g0168751 Lupinus albus HOM05D007044 ORTHO05D008981 4.7e-24 117.5 401 26.9
Hma1.2p1_0050F.1_g029110 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 7.9e-24 116.7 575 25.9
Lsat_1_v5_gn_2_40340 Lactuca sativa HOM05D007044 ORTHO05D008981 7.9e-24 116.7 361 26.9
TAR381G1118 Trochodendron aralioides HOM05D007044 ORTHO05D008981 7.9e-24 116.7 597 24.1
FAN26G2478 Fragaria x ananassa HOM05D007044 ORTHO05D008981 1.0e-23 116.3 400 27.8
MCO15G559 Micromonas commoda HOM05D007044 ORTHO05D008981 1.0e-23 116.3 397 28.2
unitig_61.g26193 Utricularia gibba HOM05D007044 ORTHO05D008981 2.3e-23 115.2 418 28.0
HPP92_022004 Vanilla planifolia HOM05D007044 ORTHO05D008981 2.3e-23 115.2 590 23.9
FAN23G2791 Fragaria x ananassa HOM05D007044 ORTHO05D008981 3.0e-23 114.8 596 25.2
arahy.Tifrunner.gnm1.ann1.B8MN22 Arachis hypogaea HOM05D007044 ORTHO05D008981 5.1e-23 114.0 404 27.5
Sabra04G0082400 Salix brachista HOM05D007044 ORTHO05D008981 8.8e-23 113.2 369 26.8
Prupe.4G288100 Prunus persica HOM05D007044 ORTHO05D008981 1.1e-22 112.8 388 25.8
Dinv05984 Davidia involucrata HOM05D007044 ORTHO05D008981 1.5e-22 112.5 399 26.8
FAN19G0897 Fragaria x ananassa HOM05D007044 ORTHO05D008981 4.4e-22 110.9 399 26.6
Thecc.01G145800 Theobroma cacao HOM05D007044 ORTHO05D008981 5.7e-22 110.5 604 23.7
HanXRQChr10g0285851 Helianthus annuus HOM05D007044 ORTHO05D008981 9.7e-22 109.8 322 27.3
FvH4_1g25860 Fragaria vesca HOM05D007044 ORTHO05D008981 1.7e-21 109.0 399 26.3
ATR1136G039 Amborella trichopoda HOM05D007044 ORTHO05D008981 3.7e-21 107.8 406 26.6
MD00G1030500 Malus domestica HOM05D007044 ORTHO05D008981 3.7e-21 107.8 412 25.2
Oeu063700.1 Olea europaea HOM05D007044 ORTHO05D008981 3.7e-21 107.8 250 30.0
SEGI_35790 Sequoiadendron giganteum HOM05D007044 ORTHO05D008981 3.7e-21 107.8 400 26.2
Glyma.20G214500 Glycine max HOM05D007044 ORTHO05D008981 4.8e-21 107.5 401 26.2
MBI03_g18677_MAGBIO Magnolia biondii HOM05D007044 ORTHO05D008981 1.1e-20 106.3 578 26.1
Phvul.007G114400 Phaseolus vulgaris HOM05D007044 ORTHO05D008981 2.4e-20 105.1 601 25.0
Pp3c8_4410 Physcomitrium patens HOM05D007044 ORTHO05D008981 1.2e-19 102.8 604 24.3
Nitab4.5_0001785g0040 Nicotiana tabacum HOM05D007044 ORTHO05D008981 2.6e-19 101.7 604 24.0
Mapoly0010s0148 Marchantia polymorpha HOM05D007044 ORTHO05D008981 1.7e-18 99.0 250 31.2
Thhalv10006013m.g Eutrema salsugineum HOM05D007044 ORTHO05D008981 6.5e-18 97.1 426 25.8
CAN.G10.5 Capsicum annuum HOM05D007044 ORTHO05D008981 1.5e-17 95.9 558 22.4
RcHm_v2.0_Chr3g0485001 Rosa chinensis HOM05D007044 ORTHO05D008981 5.5e-17 94.0 252 30.2
QL10p037666 Quercus lobata HOM05D007044 ORTHO05D008981 3.6e-16 91.3 243 29.6
Cpa.g.sc138.45 Carica papaya HOM05D007044 ORTHO05D008981 4.7e-16 90.9 238 30.7
Hund07191 Selenicereus undatus HOM05D007044 ORTHO05D008981 8.0e-16 90.1 409 27.9
CARHR166680 Cardamine hirsuta HOM05D007044 ORTHO05D008981 1.8e-15 89.0 376 25.3
MCO07G433 Micromonas commoda HOM05D007044 ORTHO05D008981 2.0e-14 85.5 418 25.6
Cre07.g346418 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 9.7e-14 83.2 277 29.6
PGSC0003DMG400004247 Solanum tuberosum HOM05D007044 ORTHO05D008981 9.7e-14 83.2 204 29.4
ECA240G2444 Erigeron canadensis HOM05D007044 ORTHO05D008981 2.2e-13 82.0 205 30.7
Hma1.2p1_0050F.1_g029120 Hydrangea macrophylla HOM05D007044 ORTHO05D008981 2.8e-13 81.6 401 26.4
Nn3g20178 Nelumbo nucifera HOM05D007044 ORTHO05D008981 4.8e-13 80.9 199 31.7
Rhsim10G0120300 Rhododendron simsii HOM05D007044 ORTHO05D008981 1.1e-12 79.7 429 24.7
Sc16g0009910 Simmondsia chinensis HOM05D007044 ORTHO05D008981 2.4e-12 78.6 203 31.0
Potri.004G135700 Populus trichocarpa HOM05D007044 ORTHO05D008981 5.3e-12 77.4 398 28.1
CDE06G2742 Ceratophyllum demersum HOM05D007044 ORTHO05D008981 2.0e-11 75.5 203 29.1
Atru.chr3.1445 Acer truncatum HOM05D007044 ORTHO05D008981 2.7e-11 75.1 201 27.9
AagrBONN_evm.TU.Sc2ySwM_368.1798 Anthoceros agrestis HOM05D007044 ORTHO05D008981 3.5e-11 74.7 392 26.5
CiPaw.15G185700 Carya illinoinensis HOM05D007044 ORTHO05D008981 1.0e-10 73.2 294 28.6
CsaV3_4G029950 Cucumis sativus L. HOM05D007044 ORTHO05D008981 1.7e-10 72.4 392 24.7
Mapoly0152s0006 Marchantia polymorpha HOM05D004224 ORTHO05D001113 2.7e-08 65.1 176 30.7
Cre03.g164650 Chlamydomonas reinhardtii HOM05D007044 ORTHO05D008981 3.6e-08 64.7 281 27.0
Cfa023385 Carpinus fangiana HOM05D005456 ORTHO05D028567 4.0e-07 61.2 137 31.4
Mapoly0016s0035 Marchantia polymorpha HOM05D005656 ORTHO05D006437 6.8e-07 60.5 198 24.7
AagrBONN_evm.TU.Sc2ySwM_228.2225 Anthoceros agrestis HOM05D001316 ORTHO05D001113 8.8e-07 60.1 158 30.4
FAN28G0850 Fragaria x ananassa HOM05D007044 ORTHO05D008981 8.8e-07 60.1 163 30.1
PRCOL_00000792 Prasinoderma coloniale HOM05D004224 ORTHO05D028567 2.0e-06 58.9 250 26.4
CDE06G0802 Ceratophyllum demersum HOM05D003697 ORTHO05D005452 2.6e-06 58.5 99 34.3
Lj1g0000530 Lotus japonicus HOM05D006557 ORTHO05D008177 2.6e-06 58.5 136 30.1
Pp3c24_9610 Physcomitrium patens HOM05D004224 ORTHO05D001113 2.6e-06 58.5 135 31.1
Cfa001561 Carpinus fangiana HOM05D005234 ORTHO05D006583 3.4e-06 58.2 256 23.0
Pp3c22_6390 Physcomitrium patens HOM05D004224 ORTHO05D006437 3.4e-06 58.2 201 24.4


User provided reference genes

Program Settings