Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G429 Micromonas commoda HOM05D006311 ORTHO05D007732 1.7e-109 399.4 217 100.0
CBR_g30935 Chara braunii HOM05D006311 ORTHO05D007732 4.2e-39 165.6 137 62.0
Pp3c14_19090 Physcomitrium patens HOM05D006311 ORTHO05D007732 5.5e-39 165.2 181 54.7
TWI31G0202 Tripterygium wilfordii HOM05D006311 ORTHO05D007732 2.1e-38 163.3 130 66.2
Gohir.A09G097700 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.7e-38 162.9 133 62.4
Gorai.006G114200 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.7e-38 162.9 133 62.4
Mapoly0006s0182 Marchantia polymorpha HOM05D006311 ORTHO05D007732 4.6e-38 162.2 131 66.4
Potri.009G161800 Populus trichocarpa HOM05D006311 ORTHO05D007732 4.6e-38 162.2 131 64.9
MD11G1172600 Malus domestica HOM05D006311 ORTHO05D007732 6.0e-38 161.8 133 63.9
Medtr4g052010 Medicago truncatula HOM05D006311 ORTHO05D007732 1.0e-37 161.0 122 67.2
Duzib150G1639 Durio zibethinus HOM05D006311 ORTHO05D007732 1.3e-37 160.6 134 60.4
Sabra09G0126500 Salix brachista HOM05D006311 ORTHO05D007732 1.3e-37 160.6 125 66.4
TPR.G4615 Trifolium pratense HOM05D006311 ORTHO05D007732 1.3e-37 160.6 128 65.6
Gohir.D09G097500 Gossypium hirsutum HOM05D006311 ORTHO05D007732 1.8e-37 160.2 133 61.7
MBI17_g18935_MAGBIO Magnolia biondii HOM05D006311 ORTHO05D007732 1.8e-37 160.2 134 61.2
CiPaw.13G131700 Carya illinoinensis HOM05D006311 ORTHO05D007732 3.0e-37 159.5 131 62.6
Sc21g0006890 Simmondsia chinensis HOM05D006311 ORTHO05D007732 3.0e-37 159.5 137 60.6
CANSAT54G0913 Cannabis sativa HOM05D006311 ORTHO05D007732 3.9e-37 159.1 139 61.2
COL.COLO4_22654 Corchorus olitorius HOM05D006311 ORTHO05D007732 3.9e-37 159.1 125 65.6
Eucgr.J00538 Eucalyptus grandis HOM05D006311 ORTHO05D007732 3.9e-37 159.1 184 50.5
Aqoxy4G02682 Aquilegia oxysepala HOM05D006311 ORTHO05D007732 5.1e-37 158.7 121 66.9
ClCG02G022370 Citrullus lanatus HOM05D006311 ORTHO05D007732 5.1e-37 158.7 138 60.1
Lj3g0006801 Lotus japonicus HOM05D006311 ORTHO05D007732 5.1e-37 158.7 134 63.4
vmacro14327 Vaccinium macrocarpon HOM05D006311 ORTHO05D007732 5.1e-37 158.7 132 63.6
Cfa009969 Carpinus fangiana HOM05D006311 ORTHO05D007732 6.7e-37 158.3 130 62.3
Hund20941 Selenicereus undatus HOM05D006311 ORTHO05D007732 8.7e-37 157.9 130 63.8
VMungo1127G2206 Vigna mungo HOM05D006311 ORTHO05D007732 8.7e-37 157.9 130 63.1
CSS0008256 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.1e-36 157.5 130 64.6
CSS0012591 Camellia sinensis var. sinensis HOM05D006311 ORTHO05D007732 1.1e-36 157.5 130 64.6
ECA238G1364 Erigeron canadensis HOM05D006311 ORTHO05D007732 1.1e-36 157.5 132 58.3
Peaxi162Scf00224g00818 Petunia axillaris HOM05D006311 ORTHO05D007732 1.1e-36 157.5 137 61.3
CAN.G745.31 Capsicum annuum HOM05D006311 ORTHO05D007732 1.5e-36 157.1 139 60.4
Cpa.g.sc195.39 Carica papaya HOM05D006311 ORTHO05D007732 1.5e-36 157.1 131 64.1
Ciclev10029330m.g Citrus clementina HOM05D006311 ORTHO05D007732 1.5e-36 157.1 130 62.3
Lalb_Chr01g0004961 Lupinus albus HOM05D006311 ORTHO05D007732 1.5e-36 157.1 136 61.0
RcHm_v2.0_Chr5g0047271 Rosa chinensis HOM05D006311 ORTHO05D007732 1.5e-36 157.1 129 62.8
DCAR_010317 Daucus carota HOM05D006311 ORTHO05D007732 1.9e-36 156.8 162 53.7
Nn2g14263 Nelumbo nucifera HOM05D006311 ORTHO05D007732 1.9e-36 156.8 130 61.5
Thecc.09G276000 Theobroma cacao HOM05D006311 ORTHO05D007732 1.9e-36 156.8 133 60.9
SalBow6G1677 Salvia bowleyana HOM05D006311 ORTHO05D007732 2.5e-36 156.4 158 55.1
SEGI_25108 Sequoiadendron giganteum HOM05D006311 ORTHO05D007732 2.5e-36 156.4 136 62.5
AUR62001536 Chenopodium quinoa HOM05D006311 ORTHO05D007732 3.3e-36 156.0 134 59.7
Glyma.11G180200 Glycine max HOM05D006311 ORTHO05D007732 3.3e-36 156.0 130 61.5
Psat7g187040 Pisum sativum HOM05D006311 ORTHO05D007732 3.3e-36 156.0 127 63.0
Atru.chr3.3143 Acer truncatum HOM05D006311 ORTHO05D007732 4.3e-36 155.6 131 61.1
CsaV3_6G038500 Cucumis sativus L. HOM05D006311 ORTHO05D007732 4.3e-36 155.6 134 59.0
FvH4_3g25980 Fragaria vesca HOM05D006311 ORTHO05D007732 4.3e-36 155.6 135 60.0
FAN11G0814 Fragaria x ananassa HOM05D006311 ORTHO05D007732 4.3e-36 155.6 135 60.0
QL01p011364 Quercus lobata HOM05D006311 ORTHO05D007732 4.3e-36 155.6 137 59.9
FAN25G1023 Fragaria x ananassa HOM05D006311 ORTHO05D007732 5.6e-36 155.2 135 60.0
Glyma.12G093300 Glycine max HOM05D006311 ORTHO05D007732 5.6e-36 155.2 129 61.2
QL01p011627 Quercus lobata HOM05D006311 ORTHO05D007732 5.6e-36 155.2 131 62.6
FAN16G2986 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.4e-36 154.8 129 62.8
FAN21G2836 Fragaria x ananassa HOM05D006311 ORTHO05D007732 7.4e-36 154.8 129 62.8
Manes.11G165200 Manihot esculenta HOM05D006311 ORTHO05D007732 7.4e-36 154.8 131 61.1
Sed0028181 Sechium edule HOM05D006311 ORTHO05D007732 7.4e-36 154.8 133 61.7
THA.LOC104826442 Tarenaya hassleriana HOM05D006311 ORTHO05D007732 7.4e-36 154.8 132 59.8
Migut.D02415 Erythranthe guttata HOM05D006311 ORTHO05D007732 1.3e-35 154.1 173 51.4
Nitab4.5_0000893g0010 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.3e-35 154.1 133 60.2
GSVIVG01036060001 Vitis vinifera HOM05D006311 ORTHO05D007732 1.3e-35 154.1 137 58.4
Cc01_g08620 Coffea canephora HOM05D006311 ORTHO05D007732 1.6e-35 153.7 174 52.3
Nitab4.5_0001135g0160 Nicotiana tabacum HOM05D006311 ORTHO05D007732 1.6e-35 153.7 130 61.5
MSTRG.21022 Avicennia marina HOM05D006311 ORTHO05D007732 2.1e-35 153.3 136 59.6
Carub.0004s0790 Capsella rubella HOM05D006311 ORTHO05D007732 2.1e-35 153.3 141 57.4
CARHR119830 Cardamine hirsuta HOM05D006311 ORTHO05D007732 2.1e-35 153.3 131 61.8
Rhsim01G0202100 Rhododendron simsii HOM05D006311 ORTHO05D007732 2.1e-35 153.3 131 62.6
TAR623G0571 Trochodendron aralioides HOM05D006311 ORTHO05D007732 2.1e-35 153.3 130 60.8
AUR62020246 Chenopodium quinoa HOM05D006311 ORTHO05D007732 2.8e-35 152.9 134 58.2
Ca_19458_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.8e-35 152.9 124 65.3
Ca_29924_v3 Cicer arietinum L. HOM05D006311 ORTHO05D007732 2.8e-35 152.9 124 65.3
MELO3C014513.2 Cucumis melo HOM05D006311 ORTHO05D007732 2.8e-35 152.9 134 58.2
Dinv05953 Davidia involucrata HOM05D006311 ORTHO05D007732 2.8e-35 152.9 130 60.0
PGR119G0707 Punica granatum HOM05D006311 ORTHO05D007732 2.8e-35 152.9 132 61.4
HPP92_023073 Vanilla planifolia HOM05D006311 ORTHO05D007732 2.8e-35 152.9 141 56.7
AL4G21210 Arabidopsis lyrata HOM05D006311 ORTHO05D007732 3.7e-35 152.5 135 60.0
Oeu048845.1 Olea europaea HOM05D006311 ORTHO05D007732 3.7e-35 152.5 131 61.8
PGSC0003DMG400019619 Solanum tuberosum HOM05D006311 ORTHO05D007732 3.7e-35 152.5 158 53.2
AT2G27290 Arabidopsis thaliana HOM05D006311 ORTHO05D007732 6.2e-35 151.8 137 58.4
HanXRQChr14g0433141 Helianthus annuus HOM05D006311 ORTHO05D007732 6.2e-35 151.8 129 59.7
Lalb_Chr03g0028331 Lupinus albus HOM05D006311 ORTHO05D007732 6.2e-35 151.8 139 57.6
Solyc11g068790.2 Solanum lycopersicum HOM05D006311 ORTHO05D007732 6.2e-35 151.8 138 60.1
arahy.Tifrunner.gnm1.ann1.INBK63 Arachis hypogaea HOM05D006311 ORTHO05D007732 8.1e-35 151.4 133 58.6
Actinidia07269 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.1e-34 151.0 130 60.0
arahy.Tifrunner.gnm1.ann1.HB0RZJ Arachis hypogaea HOM05D006311 ORTHO05D007732 1.1e-34 151.0 133 58.6
MSTRG.18783 Avicennia marina HOM05D006311 ORTHO05D007732 1.1e-34 151.0 137 59.9
Phvul.011G097600 Phaseolus vulgaris HOM05D006311 ORTHO05D007732 1.1e-34 151.0 134 61.2
PSO384G4643 Papaver somniferum HOM05D006311 ORTHO05D007732 1.4e-34 150.6 122 61.5
Sopen11g027510 Solanum pennellii HOM05D006311 ORTHO05D007732 1.4e-34 150.6 130 60.0
Lsat_1_v5_gn_2_35940 Lactuca sativa HOM05D006311 ORTHO05D007732 1.8e-34 150.2 132 57.6
PSO339G0926 Papaver somniferum HOM05D006311 ORTHO05D007732 2.4e-34 149.8 124 60.5
Aa31LG5G8700 Aethionema arabicum HOM05D006311 ORTHO05D007732 3.1e-34 149.4 130 60.0
EL10Ac7g16320 Beta vulgaris HOM05D006311 ORTHO05D007732 3.1e-34 149.4 134 57.5
C04p56680 Brassica napus HOM05D006311 ORTHO05D007732 3.1e-34 149.4 135 61.5
BolC4t27200H Brassica oleracea HOM05D006311 ORTHO05D007732 3.1e-34 149.4 135 61.5
Os04g0416000 Oryza sativa ssp. japonica HOM05D006311 ORTHO05D007732 3.1e-34 149.4 131 60.3
BolC4t27194H Brassica oleracea HOM05D006311 ORTHO05D007732 4.0e-34 149.1 140 59.3
BcaB06g28142 Brassica carinata HOM05D006311 ORTHO05D007732 6.9e-34 148.3 135 60.7
Sp4g10100 Schrenkiella parvula HOM05D006311 ORTHO05D007732 9.0e-34 147.9 140 55.7
ATR0772G022 Amborella trichopoda HOM05D006311 ORTHO05D007732 1.5e-33 147.1 127 59.1
A04p20870 Brassica napus HOM05D006311 ORTHO05D007732 2.0e-33 146.7 136 57.4
SMO146G0331 Selaginella moellendorffii HOM05D006311 ORTHO05D007732 2.6e-33 146.4 127 63.0
BcaB06g28139 Brassica carinata HOM05D006311 ORTHO05D007732 3.4e-33 146.0 139 56.1
Thhalv10002100m.g Eutrema salsugineum HOM05D006311 ORTHO05D007732 3.4e-33 146.0 130 60.8
unitig_0.g1470 Utricularia gibba HOM05D006311 ORTHO05D007732 3.4e-33 146.0 130 58.5
SGA_v2.0_scaffold7G03983 Striga asiatica HOM05D006311 ORTHO05D007732 1.0e-32 144.4 125 60.8
BcaB01g03062 Brassica carinata HOM05D006311 ORTHO05D007732 1.3e-32 144.1 136 58.1
BcaB01g03063 Brassica carinata HOM05D006311 ORTHO05D007732 1.3e-32 144.1 136 58.1
BraA04t17659Z Brassica rapa HOM05D001305 ORTHO05D007732 1.7e-32 143.7 137 56.2
Cre12.g485850 Chlamydomonas reinhardtii HOM05D006311 ORTHO05D007732 2.9e-32 142.9 128 60.9
CDE02G3359 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 6.5e-32 141.7 119 60.5
AagrBONN_evm.TU.Sc2ySwM_117.22 Anthoceros agrestis HOM05D006311 ORTHO05D007732 1.9e-31 140.2 180 47.2
PRCOL_00001321 Prasinoderma coloniale HOM05D006311 ORTHO05D007732 4.2e-31 139.0 133 60.2
Haze_23330 Corylus avellana HOM05D006311 ORTHO05D007732 3.0e-29 132.9 118 61.9
Lj1A261G25 Lonicera japonica HOM05D006311 ORTHO05D007732 5.1e-29 132.1 115 62.6
Prupe.6G139600 Prunus persica HOM05D006311 ORTHO05D007732 1.9e-28 130.2 135 52.6
SGA_v2.0_scaffold114G31957 Striga asiatica HOM05D006311 ORTHO05D007732 1.8e-26 123.6 116 57.8
MD03G1152600 Malus domestica HOM05D006311 ORTHO05D007732 1.2e-25 120.9 103 58.3
Gohir.A07G112050 Gossypium hirsutum HOM05D006311 ORTHO05D007732 2.3e-21 106.7 90 60.0
Gohir.D07G115550 Gossypium hirsutum HOM05D006311 ORTHO05D007732 6.7e-21 105.1 88 59.1
Gorai.001G123800 Gossypium raimondii HOM05D006311 ORTHO05D007732 2.5e-20 103.2 88 58.0
BcaC02g08253 Brassica carinata HOM05D006311 ORTHO05D007732 8.5e-16 88.2 136 41.9
Zm00001eb422070 Zea mays HOM05D006311 ORTHO05D007732 1.2e-14 84.3 97 53.6
Oeu009055.1 Olea europaea HOM05D000182 ORTHO05D000112 1.6e-14 84.0 92 53.3
BcaC02g08251 Brassica carinata HOM05D006311 ORTHO05D007732 3.6e-14 82.8 91 53.8
BraA04t17657Z Brassica rapa HOM05D006311 ORTHO05D007732 5.7e-12 75.5 83 51.8
CDE08G1250 Ceratophyllum demersum HOM05D006311 ORTHO05D007732 2.2e-11 73.6 56 58.9
A04p20840 Brassica napus HOM05D006311 ORTHO05D007732 6.3e-11 72.0 75 54.7
Actinidia24237 Actinidia chinensis HOM05D006311 ORTHO05D007732 1.7e-08 63.9 99 43.4
Mapoly0036s0025 Marchantia polymorpha HOM05D006047 ORTHO05D007353 1.1e-07 61.2 105 40.0


User provided reference genes

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