Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 3.6e-308 1060.8 573 100.0
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 1.1e-54 218.8 598 34.3
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 4.5e-48 196.8 484 35.3
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 6.0e-37 159.8 498 30.5
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 4.3e-35 153.7 504 29.6
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 2.9e-31 141.0 499 27.3
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 6.5e-31 139.8 495 27.3
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 2.1e-29 134.8 515 27.2
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 1.0e-28 132.5 495 27.5
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 3.9e-28 130.6 498 27.9
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 3.9e-28 130.6 495 26.5
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 8.8e-28 129.4 495 27.1
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 8.8e-28 129.4 501 25.9
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 1.5e-27 128.6 500 27.2
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 1.5e-27 128.6 515 26.2
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 2.5e-27 127.9 497 27.0
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 3.3e-27 127.5 496 26.6
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 5.7e-27 126.7 496 26.2
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.3e-26 125.6 500 25.4
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 1.3e-26 125.6 498 27.7
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 1.3e-26 125.6 497 25.8
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 1.7e-26 125.2 499 26.9
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 2.8e-26 124.4 510 26.5
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 2.8e-26 124.4 518 25.9
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 3.7e-26 124.0 497 27.4
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 4.8e-26 123.6 497 27.0
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 4.8e-26 123.6 515 26.6
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 8.2e-26 122.9 496 25.6
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 1.1e-25 122.5 514 24.3
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 1.1e-25 122.5 495 25.5
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 1.4e-25 122.1 500 27.2
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 1.8e-25 121.7 498 26.9
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 1.8e-25 121.7 498 27.1
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 2.4e-25 121.3 496 27.4
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.4e-25 121.3 498 27.1
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 2.4e-25 121.3 498 25.9
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 2.4e-25 121.3 493 25.6
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 3.1e-25 120.9 512 25.4
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 5.3e-25 120.2 554 26.4
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 1.2e-24 119.0 495 25.5
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 2.6e-24 117.9 498 26.3
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 3.4e-24 117.5 499 25.7
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 5.9e-24 116.7 497 27.0
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 5.9e-24 116.7 494 27.3
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 5.9e-24 116.7 497 27.2
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 5.9e-24 116.7 496 26.4
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 7.7e-24 116.3 498 26.7
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 7.7e-24 116.3 510 28.4
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 7.7e-24 116.3 495 26.5
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 1.0e-23 115.9 496 27.6
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 1.7e-23 115.2 496 25.4
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 8.5e-23 112.8 494 25.3
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 8.5e-23 112.8 498 26.5
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 1.1e-22 112.5 497 26.6
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 1.4e-22 112.1 499 26.7
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 3.2e-22 110.9 498 26.7
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 3.2e-22 110.9 495 25.9
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 3.2e-22 110.9 501 26.1
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 3.2e-22 110.9 476 27.3
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 4.2e-22 110.5 513 26.1
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 4.2e-22 110.5 534 25.8
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 4.2e-22 110.5 496 24.2
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 5.5e-22 110.2 495 25.9
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 5.5e-22 110.2 496 26.0
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 5.5e-22 110.2 495 26.9
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 7.2e-22 109.8 493 25.8
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 7.2e-22 109.8 505 26.9
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 7.2e-22 109.8 499 26.5
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.2e-21 109.0 519 25.8
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 1.2e-21 109.0 497 26.2
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 1.6e-21 108.6 499 26.9
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 6.1e-21 106.7 496 25.6
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 1.4e-20 105.5 500 26.2
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.4e-20 105.5 496 25.2
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 2.3e-20 104.8 499 27.5
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 3.9e-20 104.0 436 25.9
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 3.9e-20 104.0 450 26.9
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 5.1e-20 103.6 457 25.6
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 6.7e-20 103.2 500 25.6
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 6.7e-20 103.2 500 25.6
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 6.7e-20 103.2 494 24.1
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 8.8e-20 102.8 498 26.5
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 8.8e-20 102.8 496 24.2
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 8.8e-20 102.8 500 25.2
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 1.5e-19 102.1 494 24.7
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 2.6e-19 101.3 386 29.0
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 2.8e-18 97.8 496 25.0
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 2.8e-18 97.8 495 24.2
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 1.1e-17 95.9 516 26.0
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.4e-17 95.5 498 25.1
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 5.3e-17 93.6 498 24.5
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 7.0e-17 93.2 518 25.7
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.3e-15 89.0 427 24.8
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 2.9e-15 87.8 465 26.5
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 2.5e-14 84.7 472 23.1
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 3.6e-13 80.9 217 30.9
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 7.4e-11 73.2 102 34.3
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 2.2e-10 71.6 432 25.2
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 8.2e-10 69.7 310 26.1
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 5.9e-08 63.5 256 26.6
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.3e-07 62.4 258 29.1
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 1.3e-07 62.4 256 27.3
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 2.9e-07 61.2 90 38.9
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 1.1e-06 59.3 186 30.6
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 9.4e-06 56.2 190 29.5


User provided reference genes

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