Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G207 Micromonas commoda HOM05D002451 ORTHO05D005601 0.0e+00 2253.8 1314 100.0
SEGI_26537 Sequoiadendron giganteum HOM05D002451 ORTHO05D005601 1.3e-31 143.3 326 32.8
vmacro18852 Vaccinium macrocarpon HOM05D002451 ORTHO05D005601 7.4e-30 137.5 357 30.0
Actinidia32098 Actinidia chinensis HOM05D002451 ORTHO05D005601 1.1e-28 133.7 357 28.9
EL10Ac9g21204 Beta vulgaris HOM05D002451 ORTHO05D005601 1.1e-28 133.7 376 29.8
PGR102G3176 Punica granatum HOM05D002451 ORTHO05D005601 2.4e-28 132.5 349 30.1
Lsat_1_v5_gn_4_97440 Lactuca sativa HOM05D002451 ORTHO05D005601 5.3e-28 131.3 347 29.1
ATR0705G185 Amborella trichopoda HOM05D002451 ORTHO05D005601 4.5e-27 128.3 363 27.3
Aqoxy7G01406 Aquilegia oxysepala HOM05D002451 ORTHO05D005601 5.8e-27 127.9 356 28.7
Cfa003647 Carpinus fangiana HOM05D002451 ORTHO05D005601 1.0e-26 127.1 359 28.1
Manes.11G033500 Manihot esculenta HOM05D002451 ORTHO05D005601 1.0e-26 127.1 347 28.0
CiPaw.01G231400 Carya illinoinensis HOM05D002451 ORTHO05D005601 1.7e-26 126.3 334 29.0
HanXRQChr09g0276251 Helianthus annuus HOM05D002451 ORTHO05D005601 2.2e-26 125.9 351 29.1
Nn8g39071 Nelumbo nucifera HOM05D002451 ORTHO05D005601 2.2e-26 125.9 352 28.1
CsaV3_7G035270 Cucumis sativus L. HOM05D002451 ORTHO05D005601 3.8e-26 125.2 357 27.2
Gorai.010G230600 Gossypium raimondii HOM05D002451 ORTHO05D005601 4.9e-26 124.8 348 29.0
Gohir.D06G197800 Gossypium hirsutum HOM05D002451 ORTHO05D005601 6.5e-26 124.4 324 29.9
Pp3c9_4950 Physcomitrium patens HOM05D002451 ORTHO05D005601 1.9e-25 122.9 1276 22.7
MSTRG.11027 Avicennia marina HOM05D002451 ORTHO05D005601 3.2e-25 122.1 354 28.5
Os07g0177100 Oryza sativa ssp. japonica HOM05D002451 ORTHO05D005601 3.2e-25 122.1 395 28.6
Gohir.A06G189400 Gossypium hirsutum HOM05D002451 ORTHO05D005601 4.2e-25 121.7 350 29.1
Lalb_Chr14g0373021 Lupinus albus HOM05D002451 ORTHO05D005601 4.2e-25 121.7 347 27.7
HPP92_007690 Vanilla planifolia HOM05D002451 ORTHO05D005601 7.1e-25 120.9 396 28.0
Nitab4.5_0006467g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 1.6e-24 119.8 352 28.1
Nitab4.5_0006902g0020 Nicotiana tabacum HOM05D002451 ORTHO05D005601 2.7e-24 119.0 352 27.8
TAR636G2911 Trochodendron aralioides HOM05D002451 ORTHO05D005601 2.7e-24 119.0 350 28.3
arahy.Tifrunner.gnm1.ann1.65X03I Arachis hypogaea HOM05D002451 ORTHO05D005601 6.0e-24 117.9 347 26.5
Lj1g0009957 Lotus japonicus HOM05D002451 ORTHO05D005601 6.0e-24 117.9 348 27.0
TWI12G0408 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 6.0e-24 117.9 348 28.4
Ca_01165_v3 Cicer arietinum L. HOM05D002451 ORTHO05D005601 1.0e-23 117.1 357 26.3
Atru.chr1.3524 Acer truncatum HOM05D002451 ORTHO05D005601 1.8e-23 116.3 348 27.3
Phvul.005G166100 Phaseolus vulgaris HOM05D002451 ORTHO05D005601 1.8e-23 116.3 351 25.9
SMO111G0185 Selaginella moellendorffii HOM05D002451 ORTHO05D005601 1.8e-23 116.3 343 28.3
Cc04_g02550 Coffea canephora HOM05D002451 ORTHO05D005601 5.1e-23 114.8 351 26.2
PSO063G3373 Papaver somniferum HOM05D002451 ORTHO05D005601 6.7e-23 114.4 350 28.0
Zm00001eb301230 Zea mays HOM05D002451 ORTHO05D005601 1.5e-22 113.2 363 26.7
FAN09G4229 Fragaria x ananassa HOM05D002451 ORTHO05D005601 1.9e-22 112.8 324 27.5
RcHm_v2.0_Chr2g0140541 Rosa chinensis HOM05D002451 ORTHO05D005601 1.9e-22 112.8 348 27.3
FvH4_6g32400 Fragaria vesca HOM05D002451 ORTHO05D005601 2.5e-22 112.5 348 27.0
FAN14G4820 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.5e-22 112.5 348 27.0
Oeu017119.1 Olea europaea HOM05D002451 ORTHO05D005601 2.5e-22 112.5 374 26.7
TPR.G6596 Trifolium pratense HOM05D002451 ORTHO05D005601 2.5e-22 112.5 320 26.9
Glyma.15G019600 Glycine max HOM05D002451 ORTHO05D005601 3.3e-22 112.1 347 26.8
FAN02G1073 Fragaria x ananassa HOM05D002451 ORTHO05D005601 2.2e-21 109.4 348 26.7
Haze_15848 Corylus avellana HOM05D002451 ORTHO05D005601 2.8e-21 109.0 280 28.2
Glyma.13G354600 Glycine max HOM05D002451 ORTHO05D005601 6.9e-20 104.4 348 27.3
Medtr2g100870 Medicago truncatula HOM05D002451 ORTHO05D005601 1.5e-19 103.2 350 24.6
Medtr5g085950 Medicago truncatula HOM05D002451 ORTHO05D005601 1.5e-19 103.2 323 25.4
MELO3C024437.2 Cucumis melo HOM05D002451 ORTHO05D005601 5.9e-19 101.3 318 25.5
QL05p020031 Quercus lobata HOM05D002451 ORTHO05D005601 2.2e-18 99.4 257 28.0
Ah.01g022090 Amaranthus hybridus HOM05D002451 ORTHO05D005601 4.2e-17 95.1 224 32.1
CDE05G2530 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 4.2e-17 95.1 272 30.5
COL.COLO4_30513 Corchorus olitorius HOM05D002451 ORTHO05D005601 1.2e-16 93.6 1232 21.8
Thecc.06G100100 Theobroma cacao HOM05D002451 ORTHO05D005601 1.2e-16 93.6 1268 22.1
GSVIVG01016980001 Vitis vinifera HOM05D002451 ORTHO05D005601 1.6e-16 93.2 1283 21.6
AUR62031915 Chenopodium quinoa HOM05D002451 ORTHO05D005601 6.1e-16 91.3 1280 22.6
Lj9C513G3 Lonicera japonica HOM05D002451 ORTHO05D005601 6.1e-16 91.3 1252 21.8
Ciclev10024743m.g Citrus clementina HOM05D002451 ORTHO05D005601 1.0e-15 90.5 1265 20.8
Mapoly0036s0119 Marchantia polymorpha HOM05D002451 ORTHO05D005601 2.3e-15 89.4 1298 22.0
ClCG09G000220 Citrullus lanatus HOM05D002451 ORTHO05D005601 3.0e-15 89.0 270 27.0
ECA232G2699 Erigeron canadensis HOM05D002451 ORTHO05D005601 1.1e-14 87.0 1252 21.3
AUR62022206 Chenopodium quinoa HOM05D002451 ORTHO05D005601 2.5e-14 85.9 1271 22.0
Sp2g18530 Schrenkiella parvula HOM05D002451 ORTHO05D005601 2.5e-14 85.9 1277 22.5
Thhalv10003552m.g Eutrema salsugineum HOM05D002451 ORTHO05D005601 7.4e-14 84.3 1270 22.8
CAN.G1143.14 Capsicum annuum HOM05D002451 ORTHO05D005601 1.3e-13 83.6 231 29.9
Aa31LG11G5130 Aethionema arabicum HOM05D002451 ORTHO05D005601 3.7e-13 82.0 346 29.5
CSS0036196 Camellia sinensis var. sinensis HOM05D002451 ORTHO05D005601 3.7e-13 82.0 285 27.7
A02p37220 Brassica napus HOM05D002451 ORTHO05D005601 6.3e-13 81.3 1284 21.5
Psat5g295800 Pisum sativum HOM05D002451 ORTHO05D005601 6.3e-13 81.3 224 31.2
Aa31LG11G5160 Aethionema arabicum HOM05D002451 ORTHO05D005601 8.2e-13 80.9 1278 22.5
Carub.0008s0769 Capsella rubella HOM05D002451 ORTHO05D005601 1.4e-12 80.1 1258 21.9
Duzib192G0210 Durio zibethinus HOM05D002451 ORTHO05D005601 1.4e-12 80.1 1260 21.7
unitig_88.g27601 Utricularia gibba HOM05D002451 ORTHO05D005601 1.8e-12 79.7 183 33.3
Sc10g0007590 Simmondsia chinensis HOM05D002451 ORTHO05D005601 2.0e-11 76.3 1300 21.4
Peaxi162Scf00038g01032 Petunia axillaris HOM05D002451 ORTHO05D005601 2.6e-11 75.9 157 28.0
THA.LOC104809828 Tarenaya hassleriana HOM05D002451 ORTHO05D005601 3.4e-11 75.5 1287 22.3
Cre13.g605050 Chlamydomonas reinhardtii HOM05D002451 ORTHO05D005601 1.0e-10 73.9 508 38.4
Sed0021872 Sechium edule HOM05D002451 ORTHO05D005601 2.9e-10 72.4 1294 20.8
SGA_v2.0_scaffold66G22528 Striga asiatica HOM05D002451 ORTHO05D005601 5.0e-10 71.6 280 28.9
Aa31sc1931G10 Aethionema arabicum HOM05D002451 ORTHO05D005601 8.5e-10 70.9 170 29.4
Dinv37977 Davidia involucrata HOM05D002451 ORTHO05D005601 8.5e-10 70.9 1296 20.1
CDE05G1834 Ceratophyllum demersum HOM05D002451 ORTHO05D005601 1.4e-09 70.1 287 30.0
ClCG09G000210 Citrullus lanatus HOM05D002451 ORTHO05D005601 1.9e-09 69.7 225 29.3
QL05p020001 Quercus lobata HOM05D002451 ORTHO05D005601 1.9e-09 69.7 199 31.2
TWI75G1452 Tripterygium wilfordii HOM05D002451 ORTHO05D005601 2.5e-09 69.3 329 26.7
CARHR259290 Cardamine hirsuta HOM05D002451 ORTHO05D005601 3.2e-09 68.9 1265 22.2
Rhsim08G0227600 Rhododendron simsii HOM05D002451 ORTHO05D005601 3.2e-09 68.9 1256 21.4
Sabra03G0029300 Salix brachista HOM05D002451 ORTHO05D005601 4.2e-09 68.6 318 26.1
Solyc03g121030.2 Solanum lycopersicum HOM05D002451 ORTHO05D005601 4.2e-09 68.6 1272 20.8
DCAR_023080 Daucus carota HOM05D002451 ORTHO05D005601 5.5e-09 68.2 281 25.6
Sopen03g039860 Solanum pennellii HOM05D002451 ORTHO05D005601 7.2e-09 67.8 1270 20.9
Potri.003G048800 Populus trichocarpa HOM05D002451 ORTHO05D005601 9.4e-09 67.4 1299 20.1
Migut.I00897 Erythranthe guttata HOM05D002451 ORTHO05D005601 1.6e-08 66.6 1262 20.3
MD09G1202800 Malus domestica HOM05D002451 ORTHO05D005601 2.7e-08 65.9 1294 20.6
Prupe.3G059000 Prunus persica HOM05D002451 ORTHO05D005601 2.7e-08 65.9 1274 21.3
MBI04_g20307_MAGBIO Magnolia biondii HOM05D002451 ORTHO05D005601 3.6e-08 65.5 314 27.4
Cpa.g.sc25.4 Carica papaya HOM05D002451 ORTHO05D005601 4.7e-08 65.1 186 29.0
TAR624G0246 Trochodendron aralioides HOM05D002451 ORTHO05D005601 4.7e-08 65.1 191 26.7
HPP92_007773 Vanilla planifolia HOM05D002451 ORTHO05D005601 4.7e-08 65.1 156 29.5
C02p56250 Brassica napus HOM05D002451 ORTHO05D005601 7.9e-08 64.3 1281 20.8
unitig_88.g27602 Utricularia gibba HOM05D002451 ORTHO05D005601 5.1e-07 61.6 53 56.6
Aa31LG9G10330 Aethionema arabicum HOM05D002451 ORTHO05D005601 8.8e-07 60.8 170 32.4
BraA02t08709Z Brassica rapa HOM05D002451 ORTHO05D005601 8.8e-07 60.8 1257 21.6
TAR624G0431 Trochodendron aralioides HOM05D002451 ORTHO05D005601 1.1e-06 60.5 122 34.4
AT5G48120 Arabidopsis thaliana HOM05D002451 ORTHO05D005601 1.5e-06 60.1 1279 22.0
Sc17g0002930 Simmondsia chinensis HOM05D002451 ORTHO05D005601 4.4e-06 58.5 110 28.2
EL10Ac9g21205 Beta vulgaris HOM05D002451 ORTHO05D005601 5.7e-06 58.2 62 48.4
PSO832G2466 Papaver somniferum HOM05D002451 ORTHO05D005601 5.7e-06 58.2 1299 21.4
AL8G20730 Arabidopsis lyrata HOM05D002451 ORTHO05D005601 9.7e-06 57.4 1270 21.3


User provided reference genes

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