Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G143 Micromonas commoda HOM05D006487 ORTHO05D007982 2.8e-192 675.6 435 100.0
Mapoly0080s0074 Marchantia polymorpha HOM05D006487 ORTHO05D007982 1.0e-24 119.0 189 39.2
MSTRG.23212 Avicennia marina HOM05D006487 ORTHO05D007982 1.8e-21 108.2 173 39.9
Medtr6g077860 Medicago truncatula HOM05D006487 ORTHO05D007982 1.5e-20 105.1 174 39.1
Phvul.004G139000 Phaseolus vulgaris HOM05D006487 ORTHO05D007982 1.5e-20 105.1 173 38.7
Nn4g25081 Nelumbo nucifera HOM05D006487 ORTHO05D007982 5.7e-20 103.2 159 37.7
SMO117G0078 Selaginella moellendorffii HOM05D006487 ORTHO05D007982 2.8e-19 100.9 159 39.0
Pp3c25_9140 Physcomitrium patens HOM05D006487 ORTHO05D007982 6.3e-19 99.8 156 39.1
Psat1g121120 Pisum sativum HOM05D006487 ORTHO05D007982 6.3e-19 99.8 177 36.7
ATR0618G270 Amborella trichopoda HOM05D006487 ORTHO05D007982 8.2e-19 99.4 158 36.7
MD14G1245900 Malus domestica HOM05D006487 ORTHO05D007982 8.2e-19 99.4 158 38.6
SEGI_16734 Sequoiadendron giganteum HOM05D006487 ORTHO05D007982 1.1e-18 99.0 161 37.3
AUR62040775 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.4e-18 98.6 128 45.3
VMungo0464G1082 Vigna mungo HOM05D006487 ORTHO05D007982 1.4e-18 98.6 238 32.4
AUR62033020 Chenopodium quinoa HOM05D006487 ORTHO05D007982 1.8e-18 98.2 128 45.3
Nitab4.5_0000782g0060 Nicotiana tabacum HOM05D006487 ORTHO05D007982 2.4e-18 97.8 175 40.0
Carub.0001s3750 Capsella rubella HOM05D006487 ORTHO05D007982 3.1e-18 97.4 178 40.4
Cre13.g576500 Chlamydomonas reinhardtii HOM05D006487 ORTHO05D007982 3.1e-18 97.4 181 35.4
Ca_11836_v3 Cicer arietinum L. HOM05D006487 ORTHO05D007982 3.1e-18 97.4 158 36.7
TAR629G0717 Trochodendron aralioides HOM05D006487 ORTHO05D007982 5.3e-18 96.7 177 37.9
Ciclev10020398m.g Citrus clementina HOM05D006487 ORTHO05D007982 7.0e-18 96.3 161 37.9
Zm00001eb271770 Zea mays HOM05D006487 ORTHO05D007982 7.0e-18 96.3 194 36.6
BcaC07g37138 Brassica carinata HOM05D006487 ORTHO05D007982 9.1e-18 95.9 186 37.6
Glyma.16G213000 Glycine max HOM05D006487 ORTHO05D007982 9.1e-18 95.9 241 32.8
Thhalv10011620m.g Eutrema salsugineum HOM05D006487 ORTHO05D007982 1.2e-17 95.5 192 35.4
THA.LOC104820327 Tarenaya hassleriana HOM05D006487 ORTHO05D007982 1.2e-17 95.5 160 37.5
Os07g0172200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 1.5e-17 95.1 233 34.8
Rhsim08G0124800 Rhododendron simsii HOM05D006487 ORTHO05D007982 1.5e-17 95.1 174 35.1
Sp1g35330 Schrenkiella parvula HOM05D006487 ORTHO05D007982 1.5e-17 95.1 174 37.9
HPP92_014774 Vanilla planifolia HOM05D006487 ORTHO05D007982 1.5e-17 95.1 155 37.4
AL1G54980 Arabidopsis lyrata HOM05D006487 ORTHO05D007982 2.0e-17 94.7 176 38.1
Lj2g0009690 Lotus japonicus HOM05D006487 ORTHO05D007982 2.0e-17 94.7 168 36.9
Prupe.5G243800 Prunus persica HOM05D006487 ORTHO05D007982 2.0e-17 94.7 158 38.0
AagrBONN_evm.TU.Sc2ySwM_228.567 Anthoceros agrestis HOM05D006487 ORTHO05D007982 2.6e-17 94.4 155 39.4
arahy.Tifrunner.gnm1.ann1.49K0I5 Arachis hypogaea HOM05D006487 ORTHO05D007982 2.6e-17 94.4 192 33.3
CANSAT64G1132 Cannabis sativa HOM05D006487 ORTHO05D007982 2.6e-17 94.4 171 35.1
Lsat_1_v5_gn_0_10541 Lactuca sativa HOM05D006487 ORTHO05D007982 2.6e-17 94.4 169 35.5
Oeu023551.1 Olea europaea HOM05D006487 ORTHO05D007982 3.5e-17 94.0 171 38.0
C08p05120 Brassica napus HOM05D006487 ORTHO05D007982 4.5e-17 93.6 217 35.0
Atru.chr9.84 Acer truncatum HOM05D006487 ORTHO05D007982 5.9e-17 93.2 160 33.8
GSVIVG01027119001 Vitis vinifera HOM05D006487 ORTHO05D007982 5.9e-17 93.2 199 36.2
AT1G48380 Arabidopsis thaliana HOM05D006487 ORTHO05D007982 7.7e-17 92.8 235 34.5
A08p04750 Brassica napus HOM05D006487 ORTHO05D007982 7.7e-17 92.8 232 34.5
BolC8t47322H Brassica oleracea HOM05D006487 ORTHO05D007982 7.7e-17 92.8 232 34.1
BraA08t32504Z Brassica rapa HOM05D006487 ORTHO05D007982 7.7e-17 92.8 232 34.5
COL.COLO4_24904 Corchorus olitorius HOM05D006487 ORTHO05D007982 7.7e-17 92.8 135 36.3
Glyma.09G164600 Glycine max HOM05D006487 ORTHO05D007982 7.7e-17 92.8 243 31.7
Nitab4.5_0003040g0090 Nicotiana tabacum HOM05D006487 ORTHO05D007982 7.7e-17 92.8 172 39.0
Cpa.g.sc168.16 Carica papaya HOM05D006487 ORTHO05D007982 1.3e-16 92.0 172 37.8
CDE04G1004 Ceratophyllum demersum HOM05D006487 ORTHO05D007982 1.3e-16 92.0 186 34.9
Eucgr.H00648 Eucalyptus grandis HOM05D006487 ORTHO05D007982 1.3e-16 92.0 175 35.4
Thecc.05G197400 Theobroma cacao HOM05D006487 ORTHO05D007982 1.3e-16 92.0 201 34.8
arahy.Tifrunner.gnm1.ann1.FG107U Arachis hypogaea HOM05D006487 ORTHO05D007982 1.7e-16 91.7 194 33.5
TWI81G0553 Tripterygium wilfordii HOM05D006487 ORTHO05D007982 1.7e-16 91.7 214 36.0
HanXRQChr15g0492111 Helianthus annuus HOM05D006487 ORTHO05D007982 2.2e-16 91.3 196 32.1
PSO782G2052 Papaver somniferum HOM05D006487 ORTHO05D007982 2.2e-16 91.3 155 35.5
Peaxi162Scf00171g00242 Petunia axillaris HOM05D006487 ORTHO05D007982 2.2e-16 91.3 128 42.2
SalBow5G2999 Salvia bowleyana HOM05D006487 ORTHO05D007982 2.2e-16 91.3 176 37.5
BcaB04g17434 Brassica carinata HOM05D006487 ORTHO05D007982 2.9e-16 90.9 217 35.5
Dinv03426 Davidia involucrata HOM05D006487 ORTHO05D007982 2.9e-16 90.9 156 37.2
Sc07g0007560 Simmondsia chinensis HOM05D006487 ORTHO05D007982 2.9e-16 90.9 159 34.6
Gohir.A08G225300 Gossypium hirsutum HOM05D006487 ORTHO05D007982 3.8e-16 90.5 161 34.2
PGR083G2465 Punica granatum HOM05D006487 ORTHO05D007982 3.8e-16 90.5 223 33.6
SGA_v2.0_scaffold90G27746 Striga asiatica HOM05D006487 ORTHO05D007982 3.8e-16 90.5 172 34.9
ClCG01G014820 Citrullus lanatus HOM05D006487 ORTHO05D007982 5.0e-16 90.1 174 36.2
MBI06_g27513_MAGBIO Magnolia biondii HOM05D006487 ORTHO05D007982 5.0e-16 90.1 175 34.9
Manes.02G218400 Manihot esculenta HOM05D006487 ORTHO05D007982 5.0e-16 90.1 181 37.6
Pp3c5_25480 Physcomitrium patens HOM05D006487 ORTHO05D007982 5.0e-16 90.1 167 37.1
Actinidia34682 Actinidia chinensis HOM05D006487 ORTHO05D007982 6.5e-16 89.7 168 34.5
Aqoxy3G04297 Aquilegia oxysepala HOM05D006487 ORTHO05D007982 6.5e-16 89.7 134 40.3
Migut.O00267 Erythranthe guttata HOM05D006487 ORTHO05D007982 6.5e-16 89.7 169 34.9
FAN13G0937 Fragaria x ananassa HOM05D006487 ORTHO05D007982 6.5e-16 89.7 156 34.0
Sabra04G0046600 Salix brachista HOM05D006487 ORTHO05D007982 6.5e-16 89.7 133 39.1
Gohir.D08G245700 Gossypium hirsutum HOM05D006487 ORTHO05D007982 8.5e-16 89.4 161 33.5
Gorai.004G262200 Gossypium raimondii HOM05D006487 ORTHO05D007982 8.5e-16 89.4 161 33.5
Haze_18332 Corylus avellana HOM05D006487 ORTHO05D007982 1.1e-15 89.0 174 33.9
Hma1.2p1_0989F.1_g244820 Hydrangea macrophylla HOM05D006487 ORTHO05D007982 1.1e-15 89.0 214 32.2
DCAR_011682 Daucus carota HOM05D006487 ORTHO05D007982 1.4e-15 88.6 133 40.6
CARHR037990 Cardamine hirsuta HOM05D006487 ORTHO05D007982 1.9e-15 88.2 207 33.8
PSO063G4419 Papaver somniferum HOM05D006487 ORTHO05D007982 1.9e-15 88.2 202 32.7
CsaV3_1G007510 Cucumis sativus L. HOM05D006487 ORTHO05D007982 2.5e-15 87.8 171 35.1
Potri.004G069400 Populus trichocarpa HOM05D006487 ORTHO05D007982 2.5e-15 87.8 175 34.3
QL10p034099 Quercus lobata HOM05D006487 ORTHO05D007982 3.2e-15 87.4 137 38.7
FAN08G3399 Fragaria x ananassa HOM05D006487 ORTHO05D007982 4.2e-15 87.0 170 33.5
RcHm_v2.0_Chr7g0177071 Rosa chinensis HOM05D006487 ORTHO05D007982 5.5e-15 86.7 173 32.9
Sed0005317 Sechium edule HOM05D006487 ORTHO05D007982 9.4e-15 85.9 174 35.1
CAN.G929.21 Capsicum annuum HOM05D006487 ORTHO05D007982 1.6e-14 85.1 175 36.0
Cc04_g08450 Coffea canephora HOM05D006487 ORTHO05D007982 2.7e-14 84.3 208 33.7
FvH4_5g18410 Fragaria vesca HOM05D006487 ORTHO05D007982 2.7e-14 84.3 174 31.0
FAN18G0592 Fragaria x ananassa HOM05D006487 ORTHO05D007982 3.6e-14 84.0 174 31.0
Solyc03g098620.3 Solanum lycopersicum HOM05D006487 ORTHO05D007982 6.1e-14 83.2 169 35.5
Sopen03g029330 Solanum pennellii HOM05D006487 ORTHO05D007982 6.1e-14 83.2 169 35.5
PGSC0003DMG400010175 Solanum tuberosum HOM05D006487 ORTHO05D007982 6.1e-14 83.2 161 34.8
Lalb_Chr22g0353991 Lupinus albus HOM05D006487 ORTHO05D007982 1.4e-13 82.0 174 33.3
MELO3C002168.2 Cucumis melo HOM05D006487 ORTHO05D007982 2.3e-13 81.3 185 33.5
TPR.G19888 Trifolium pratense HOM05D006487 ORTHO05D007982 3.0e-13 80.9 168 33.3
PRCOL_00006754 Prasinoderma coloniale HOM05D006487 ORTHO05D007982 1.5e-12 78.6 136 39.0
Prupe.4G244900 Prunus persica HOM05D006487 ORTHO05D007982 2.2e-11 74.7 158 31.6
TAR629G1006 Trochodendron aralioides HOM05D006487 ORTHO05D007982 3.7e-11 73.9 149 37.6
Lj9A412T44 Lonicera japonica HOM05D006487 ORTHO05D007982 8.2e-11 72.8 109 42.2
vmacro17744 Vaccinium macrocarpon HOM05D006487 ORTHO05D007982 7.0e-10 69.7 150 34.7
Hund22367 Selenicereus undatus HOM05D006487 ORTHO05D007982 2.0e-09 68.2 127 36.2
EL10Ac8g19478 Beta vulgaris HOM05D006487 ORTHO05D007982 7.7e-09 66.2 149 35.6
Os06g0730200 Oryza sativa ssp. japonica HOM05D006487 ORTHO05D007982 5.0e-08 63.5 137 36.5
CBR_g34174 Chara braunii HOM05D006487 ORTHO05D007982 1.9e-07 61.6 238 27.7
FAN04G2664 Fragaria x ananassa HOM05D006487 ORTHO05D007982 1.9e-07 61.6 130 32.3
FAN09G4505 Fragaria x ananassa HOM05D006487 ORTHO05D007982 9.4e-07 59.3 99 37.4
FAN09G0815 Fragaria x ananassa HOM05D006487 ORTHO05D007982 2.7e-06 57.8 90 37.8


User provided reference genes

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