Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO12G124 Micromonas commoda HOM05D005831 ORTHO05D007007 2.8e-214 748.4 396 100.0
GSVIVG01035453001 Vitis vinifera HOM05D005831 ORTHO05D007007 5.1e-35 152.9 401 31.9
CsaV3_4G036010 Cucumis sativus L. HOM05D005831 ORTHO05D007007 6.7e-35 152.5 401 32.9
AUR62009089 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.5e-34 151.4 405 31.4
Mapoly0029s0064 Marchantia polymorpha HOM05D005831 ORTHO05D007007 1.5e-34 151.4 400 33.8
EL10Ac2g03793 Beta vulgaris HOM05D005831 ORTHO05D007007 4.3e-34 149.8 397 32.0
Thecc.09G062000 Theobroma cacao HOM05D005831 ORTHO05D007007 4.3e-34 149.8 403 32.3
Eucgr.C03149 Eucalyptus grandis HOM05D005831 ORTHO05D007007 7.4e-34 149.1 403 32.5
Os07g0608800 Oryza sativa ssp. japonica HOM05D005831 ORTHO05D007007 7.4e-34 149.1 408 33.1
Duzib150G1275 Durio zibethinus HOM05D005831 ORTHO05D007007 1.3e-33 148.3 396 32.3
ClCG05G015690 Citrullus lanatus HOM05D005831 ORTHO05D007007 1.6e-33 147.9 399 32.8
Gorai.001G020700 Gossypium raimondii HOM05D005831 ORTHO05D007007 2.1e-33 147.5 403 32.3
Sed0012871 Sechium edule HOM05D005831 ORTHO05D007007 2.1e-33 147.5 402 32.3
Prupe.1G405700 Prunus persica HOM05D005831 ORTHO05D007007 3.7e-33 146.7 399 32.3
Gohir.D07G020000 Gossypium hirsutum HOM05D005831 ORTHO05D007007 4.8e-33 146.4 406 32.8
HanXRQChr12g0359011 Helianthus annuus HOM05D005831 ORTHO05D007007 1.4e-32 144.8 401 32.2
AUR62020581 Chenopodium quinoa HOM05D005831 ORTHO05D007007 1.8e-32 144.4 405 31.4
vmacro07801 Vaccinium macrocarpon HOM05D005831 ORTHO05D007007 2.4e-32 144.1 404 33.2
Carub.0004s0626 Capsella rubella HOM05D005831 ORTHO05D007007 3.1e-32 143.7 406 31.0
ECA234G1597 Erigeron canadensis HOM05D005831 ORTHO05D007007 3.1e-32 143.7 399 31.8
Manes.03G052700 Manihot esculenta HOM05D005831 ORTHO05D007007 3.1e-32 143.7 404 30.2
Actinidia25695 Actinidia chinensis HOM05D005831 ORTHO05D007007 4.0e-32 143.3 404 32.2
Ciclev10025877m.g Citrus clementina HOM05D005831 ORTHO05D007007 9.0e-32 142.1 404 31.7
FvH4_2g31140 Fragaria vesca HOM05D005831 ORTHO05D007007 1.5e-31 141.4 399 32.1
Nn8g38706 Nelumbo nucifera HOM05D005831 ORTHO05D007007 1.5e-31 141.4 399 31.1
Glyma.14G099100 Glycine max HOM05D005831 ORTHO05D007007 2.0e-31 141.0 400 31.0
Hma1.2p1_0231F.1_g097400 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 2.0e-31 141.0 403 31.0
PSO210G0521 Papaver somniferum HOM05D005831 ORTHO05D007007 2.0e-31 141.0 402 31.8
Cfa018014 Carpinus fangiana HOM05D005831 ORTHO05D007007 2.6e-31 140.6 401 31.7
Cc08_g01270 Coffea canephora HOM05D005831 ORTHO05D007007 2.6e-31 140.6 401 30.9
FAN24G1737 Fragaria x ananassa HOM05D005831 ORTHO05D007007 2.6e-31 140.6 399 32.1
PSO210G7793 Papaver somniferum HOM05D005831 ORTHO05D007007 2.6e-31 140.6 402 31.3
PRCOL_00001676 Prasinoderma coloniale HOM05D005831 ORTHO05D007007 2.6e-31 140.6 401 31.9
RcHm_v2.0_Chr6g0311631 Rosa chinensis HOM05D005831 ORTHO05D007007 2.6e-31 140.6 396 31.6
Aa31LG5G18500 Aethionema arabicum HOM05D005831 ORTHO05D007007 3.4e-31 140.2 407 31.7
AL4G18970 Arabidopsis lyrata HOM05D005831 ORTHO05D007007 3.4e-31 140.2 405 31.4
CANSAT25G0005 Cannabis sativa HOM05D005831 ORTHO05D007007 3.4e-31 140.2 397 31.2
MD08G1070400 Malus domestica HOM05D005831 ORTHO05D007007 3.4e-31 140.2 397 31.2
MSTRG.25981 Avicennia marina HOM05D005831 ORTHO05D007007 4.5e-31 139.8 399 31.1
BcaB08g35248 Brassica carinata HOM05D005831 ORTHO05D007007 4.5e-31 139.8 404 30.7
PGR004G2090 Punica granatum HOM05D005831 ORTHO05D007007 5.8e-31 139.4 402 32.6
QL04p096581 Quercus lobata HOM05D005831 ORTHO05D007007 5.8e-31 139.4 407 31.0
Solyc04g080930.4 Solanum lycopersicum HOM05D005831 ORTHO05D007007 5.8e-31 139.4 400 30.8
Sopen04g034540 Solanum pennellii HOM05D005831 ORTHO05D007007 7.6e-31 139.0 400 30.8
TWI15G0825 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 7.6e-31 139.0 394 31.2
A09p54720 Brassica napus HOM05D005831 ORTHO05D007007 1.0e-30 138.7 403 31.3
Lj5g0001901 Lotus japonicus HOM05D005831 ORTHO05D007007 1.0e-30 138.7 400 30.5
Phvul.001G039000 Phaseolus vulgaris HOM05D005831 ORTHO05D007007 1.0e-30 138.7 398 31.4
VMungo0647G0599 Vigna mungo HOM05D005831 ORTHO05D007007 1.0e-30 138.7 400 31.0
Migut.A00086 Erythranthe guttata HOM05D005831 ORTHO05D007007 1.3e-30 138.3 400 31.5
Lsat_1_v5_gn_5_79500 Lactuca sativa HOM05D005831 ORTHO05D007007 1.3e-30 138.3 402 31.1
MD15G1051800 Malus domestica HOM05D005831 ORTHO05D007007 1.3e-30 138.3 399 31.8
Potri.006G222000 Populus trichocarpa HOM05D005831 ORTHO05D007007 1.7e-30 137.9 400 30.2
Aqoxy3G01546 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 2.2e-30 137.5 407 30.2
Sp4g07000 Schrenkiella parvula HOM05D005831 ORTHO05D007007 2.2e-30 137.5 407 30.0
BcaC07g40824 Brassica carinata HOM05D005831 ORTHO05D007007 2.9e-30 137.1 401 30.9
CAN.G6.15 Capsicum annuum HOM05D005831 ORTHO05D007007 3.8e-30 136.7 399 31.1
CiPaw.15G092600 Carya illinoinensis HOM05D005831 ORTHO05D007007 3.8e-30 136.7 402 31.1
Thhalv10002014m.g Eutrema salsugineum HOM05D005831 ORTHO05D007007 3.8e-30 136.7 406 31.0
Medtr1g015390 Medicago truncatula HOM05D005831 ORTHO05D007007 3.8e-30 136.7 400 32.0
PGSC0003DMG400003758 Solanum tuberosum HOM05D005831 ORTHO05D007007 8.4e-30 135.6 400 30.5
Cpa.g.sc126.34 Carica papaya HOM05D005831 ORTHO05D007007 1.1e-29 135.2 400 30.5
Glyma.17G225600 Glycine max HOM05D005831 ORTHO05D007007 1.4e-29 134.8 398 30.9
MBI19_g11845_MAGBIO Magnolia biondii HOM05D005831 ORTHO05D007007 1.4e-29 134.8 392 31.6
A09p55230 Brassica napus HOM05D005831 ORTHO05D007007 5.5e-29 132.9 403 30.5
BraA09t40881Z Brassica rapa HOM05D005831 ORTHO05D007007 7.1e-29 132.5 403 30.5
Lalb_Chr09g0334801 Lupinus albus HOM05D005831 ORTHO05D007007 1.2e-28 131.7 401 30.7
unitig_748.g8240 Utricularia gibba HOM05D005831 ORTHO05D007007 1.2e-28 131.7 388 29.1
CSS0021293 Camellia sinensis var. sinensis HOM05D005831 ORTHO05D007007 2.1e-28 131.0 400 30.8
C08p38160 Brassica napus HOM05D005831 ORTHO05D007007 2.7e-28 130.6 401 30.2
BolC8t51391H Brassica oleracea HOM05D005831 ORTHO05D007007 2.7e-28 130.6 401 30.2
Pp3c13_19650 Physcomitrium patens HOM05D005831 ORTHO05D007007 1.0e-27 128.6 407 31.2
Peaxi162Scf00101g01522 Petunia axillaris HOM05D005831 ORTHO05D007007 2.3e-27 127.5 391 30.4
Haze_18115 Corylus avellana HOM05D005831 ORTHO05D007007 2.5e-26 124.0 405 30.1
Oeu027284.3 Olea europaea HOM05D005831 ORTHO05D007007 6.3e-25 119.4 449 28.7
ATR0598G074 Amborella trichopoda HOM05D005831 ORTHO05D007007 1.1e-24 118.6 381 32.5
Gohir.A07G020300 Gossypium hirsutum HOM05D005831 ORTHO05D007007 2.2e-22 110.9 349 31.8
Zm00001eb108960 Zea mays HOM05D005831 ORTHO05D007007 6.5e-22 109.4 355 32.7
Sabra06G0171700 Salix brachista HOM05D005831 ORTHO05D007007 1.4e-21 108.2 410 27.6
Nitab4.5_0009773g0010 Nicotiana tabacum HOM05D005831 ORTHO05D007007 2.1e-20 104.4 371 31.0
Sc09g0010090 Simmondsia chinensis HOM05D005831 ORTHO05D007007 2.1e-20 104.4 281 31.7
COL.COLO4_21126 Corchorus olitorius HOM05D005831 ORTHO05D007007 1.0e-19 102.1 381 29.7
Dinv41837 Davidia involucrata HOM05D005831 ORTHO05D007007 1.0e-19 102.1 369 30.4
AagrBONN_evm.TU.Sc2ySwM_117.3066 Anthoceros agrestis HOM05D005831 ORTHO05D007007 2.3e-19 100.9 172 37.2
SGA_v2.0_scaffold64G21865 Striga asiatica HOM05D005831 ORTHO05D007007 2.0e-18 97.8 391 26.6
Hma1.2p1_0231F.1_g097410 Hydrangea macrophylla HOM05D005831 ORTHO05D007007 2.5e-18 97.4 174 37.4
Lj2A627G34 Lonicera japonica HOM05D005831 ORTHO05D007007 2.5e-18 97.4 402 28.9
Aqoxy2G00096 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 5.7e-18 96.3 395 27.1
arahy.Tifrunner.gnm1.ann1.2ULK6I Arachis hypogaea HOM05D005831 ORTHO05D007007 7.4e-18 95.9 392 26.3
Nitab4.5_0000446g0240 Nicotiana tabacum HOM05D005831 ORTHO05D007007 7.4e-18 95.9 369 29.0
THA.LOC104806019 Tarenaya hassleriana HOM05D005831 ORTHO05D007007 7.4e-18 95.9 413 28.1
FAN15G1366 Fragaria x ananassa HOM05D005831 ORTHO05D007007 1.3e-17 95.1 364 29.9
TPR.G38878 Trifolium pratense HOM05D005831 ORTHO05D007007 2.2e-17 94.4 173 37.6
Psat6g022600 Pisum sativum HOM05D005831 ORTHO05D007007 2.8e-17 94.0 346 30.1
TWI38G0260 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 3.7e-17 93.6 403 27.8
SalBow4G2055 Salvia bowleyana HOM05D005831 ORTHO05D001900 1.8e-16 91.3 375 28.5
Aqoxy3G01853 Aquilegia oxysepala HOM05D005831 ORTHO05D007007 9.1e-16 89.0 393 26.0
QL04p096516 Quercus lobata HOM05D000005 ORTHO05D000012 9.1e-16 89.0 169 34.9
CDE06G1722 Ceratophyllum demersum HOM05D005831 ORTHO05D007007 1.5e-15 88.2 281 31.3
FAN20G1335 Fragaria x ananassa HOM05D001583 ORTHO05D007007 3.4e-15 87.0 406 24.6
MELO3C016909.2 Cucumis melo HOM05D005831 ORTHO05D007007 1.0e-14 85.5 116 42.2
AT2G26350 Arabidopsis thaliana HOM05D005831 ORTHO05D007007 1.3e-14 85.1 284 30.3
TPR.G10653 Trifolium pratense HOM05D005831 ORTHO05D007007 3.8e-14 83.6 113 41.6
Atru.chr7.1858 Acer truncatum HOM05D005831 ORTHO05D007007 2.5e-13 80.9 139 38.1
BraA09t40930Z Brassica rapa HOM05D005831 ORTHO05D007007 2.5e-13 80.9 285 27.7
CBR_g34477 Chara braunii HOM05D005831 ORTHO05D007007 2.5e-13 80.9 117 36.8
DCAR_003715 Daucus carota HOM05D005831 ORTHO05D007007 4.2e-13 80.1 316 28.8
QL04p096475 Quercus lobata HOM05D000101 ORTHO05D000089 4.7e-12 76.6 53 54.7
TWI38G1843 Tripterygium wilfordii HOM05D005831 ORTHO05D007007 2.3e-11 74.3 51 56.9
HPP92_027844 Vanilla planifolia HOM05D005831 ORTHO05D007007 2.3e-11 74.3 51 58.8
Rhsim03G0040100 Rhododendron simsii HOM05D005831 ORTHO05D007007 3.0e-11 73.9 325 28.3
FAN27G2028 Fragaria x ananassa HOM05D005831 ORTHO05D007007 8.8e-11 72.4 171 32.2
Cre07.g337050 Chlamydomonas reinhardtii HOM05D005831 ORTHO05D007007 2.0e-10 71.2 631 22.5
TAR383G0824 Trochodendron aralioides HOM05D005831 ORTHO05D007007 2.6e-10 70.9 316 28.2
CARHR118440 Cardamine hirsuta HOM05D005831 ORTHO05D007007 2.8e-09 67.4 137 35.8
Sed0000493 Sechium edule HOM05D005831 ORTHO05D007007 1.5e-07 61.6 323 26.0
arahy.Tifrunner.gnm1.ann1.12X2WP Arachis hypogaea HOM05D005831 ORTHO05D007007 3.8e-06 57.0 76 40.8


User provided reference genes

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