Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G885 Micromonas commoda HOM05D004626 ORTHO05D005185 3.9e-90 334.7 161 100.0
Ciclev10026391m.g Citrus clementina HOM05D004626 ORTHO05D005185 3.1e-15 85.9 138 32.6
CARHR246820 Cardamine hirsuta HOM05D004626 ORTHO05D005185 5.3e-15 85.1 139 37.4
COL.COLO4_09965 Corchorus olitorius HOM05D004626 ORTHO05D005185 6.9e-15 84.7 115 40.0
Ca_16525_v3 Cicer arietinum L. HOM05D004626 ORTHO05D005185 1.5e-14 83.6 128 35.2
Thecc.01G101400 Theobroma cacao HOM05D004626 ORTHO05D005185 1.5e-14 83.6 131 35.1
Glyma.18G017100 Glycine max HOM05D004626 ORTHO05D005185 2.0e-14 83.2 134 35.1
Gohir.A11G201300 Gossypium hirsutum HOM05D004626 ORTHO05D005185 2.0e-14 83.2 141 32.6
Gohir.D11G221600 Gossypium hirsutum HOM05D004626 ORTHO05D005185 2.0e-14 83.2 141 32.6
Gorai.007G238600 Gossypium raimondii HOM05D004626 ORTHO05D005185 2.0e-14 83.2 141 32.6
Sed0012532 Sechium edule HOM05D004626 ORTHO05D005185 2.0e-14 83.2 129 34.9
SGA_v2.0_scaffold111G31515 Striga asiatica HOM05D004626 ORTHO05D005185 2.0e-14 83.2 130 36.2
SGA_v2.0_scaffold54G19499 Striga asiatica HOM05D004626 ORTHO05D005185 2.0e-14 83.2 130 36.2
CiPaw.03G141900 Carya illinoinensis HOM05D004626 ORTHO05D005185 2.6e-14 82.8 139 35.3
Duzib147G1109 Durio zibethinus HOM05D004626 ORTHO05D005185 2.6e-14 82.8 131 35.9
CsaV3_4G008860 Cucumis sativus L. HOM05D004626 ORTHO05D005185 3.4e-14 82.4 129 36.4
Mapoly0065s0037 Marchantia polymorpha HOM05D004626 ORTHO05D005185 3.4e-14 82.4 106 42.5
BraA01t00081Z Brassica rapa HOM05D004626 ORTHO05D005185 4.5e-14 82.0 139 35.3
ClCG10G009000 Citrullus lanatus HOM05D004626 ORTHO05D005185 4.5e-14 82.0 129 35.7
Oeu056607.1 Olea europaea HOM05D004626 ORTHO05D005185 4.5e-14 82.0 130 34.6
Sc20g0005870 Simmondsia chinensis HOM05D004626 ORTHO05D005185 4.5e-14 82.0 128 36.7
A01p00780 Brassica napus HOM05D004626 ORTHO05D005185 5.9e-14 81.6 139 35.3
Sp7g36010 Schrenkiella parvula HOM05D004626 ORTHO05D005185 5.9e-14 81.6 139 35.3
Aa31LG6G15380 Aethionema arabicum HOM05D004626 ORTHO05D005185 7.7e-14 81.3 138 34.8
Potri.005G075500 Populus trichocarpa HOM05D004626 ORTHO05D005185 7.7e-14 81.3 128 34.4
Hund16286 Selenicereus undatus HOM05D004626 ORTHO05D005185 7.7e-14 81.3 129 36.4
AT4G39880 Arabidopsis thaliana HOM05D004626 ORTHO05D005185 1.0e-13 80.9 139 35.3
CDE10G0605 Ceratophyllum demersum HOM05D004626 ORTHO05D005185 1.0e-13 80.9 129 34.9
Phvul.008G217800 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.0e-13 80.9 118 36.4
Phvul.L001740 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.0e-13 80.9 118 36.4
Phvul.L002040 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 1.0e-13 80.9 118 36.4
Pp3c1_13270 Physcomitrium patens HOM05D004626 ORTHO05D005185 1.0e-13 80.9 91 48.4
AL7G12120 Arabidopsis lyrata HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 35.3
A03p65840 Brassica napus HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 34.5
C07p62810 Brassica napus HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 34.5
BraA03t15636Z Brassica rapa HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 34.5
Carub.0007s0181 Capsella rubella HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 35.3
Thhalv10026378m.g Eutrema salsugineum HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 34.5
Medtr3g087190 Medicago truncatula HOM05D004626 ORTHO05D005185 1.3e-13 80.5 129 35.7
Hund13624 Selenicereus undatus HOM05D004626 ORTHO05D005185 1.3e-13 80.5 129 34.1
unitig_749.g13443 Utricularia gibba HOM05D004626 ORTHO05D005185 1.3e-13 80.5 139 33.1
VMungo0647G0150 Vigna mungo HOM05D004626 ORTHO05D005185 1.3e-13 80.5 129 32.6
arahy.Tifrunner.gnm1.ann1.IYB3ER Arachis hypogaea HOM05D004626 ORTHO05D005185 1.7e-13 80.1 87 43.7
Psat5g090160 Pisum sativum HOM05D004626 ORTHO05D005185 1.7e-13 80.1 128 35.2
EL10Ac6g15105 Beta vulgaris HOM05D004626 ORTHO05D005185 2.2e-13 79.7 87 42.5
BcaNung00909 Brassica carinata HOM05D004626 ORTHO05D005185 2.2e-13 79.7 138 34.8
BcaNung06392 Brassica carinata HOM05D004626 ORTHO05D005185 2.2e-13 79.7 138 34.8
C01p00890 Brassica napus HOM05D004626 ORTHO05D005185 2.2e-13 79.7 138 34.8
BolC1t00090H Brassica oleracea HOM05D004626 ORTHO05D005185 2.2e-13 79.7 145 33.1
Cfa002662 Carpinus fangiana HOM05D004626 ORTHO05D005185 2.2e-13 79.7 128 35.9
Haze_24931 Corylus avellana HOM05D004626 ORTHO05D005185 2.2e-13 79.7 128 35.9
MELO3C018951.2 Cucumis melo HOM05D004626 ORTHO05D005185 2.2e-13 79.7 129 35.7
SEGI_37892 Sequoiadendron giganteum HOM05D004626 ORTHO05D005185 2.2e-13 79.7 87 42.5
TWI77G0829 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 2.2e-13 79.7 129 35.7
TAR628G0369 Trochodendron aralioides HOM05D004626 ORTHO05D005185 2.9e-13 79.3 128 34.4
arahy.Tifrunner.gnm1.ann1.ZXJH7W Arachis hypogaea HOM05D004626 ORTHO05D005185 3.8e-13 79.0 87 42.5
BcaNung02302 Brassica carinata HOM05D004626 ORTHO05D005185 3.8e-13 79.0 139 33.8
DCAR_014224 Daucus carota HOM05D004626 ORTHO05D005185 3.8e-13 79.0 130 35.4
Eucgr.I00432 Eucalyptus grandis HOM05D004626 ORTHO05D005185 5.0e-13 78.6 128 35.2
TPR.G17855 Trifolium pratense HOM05D004626 ORTHO05D005185 5.0e-13 78.6 128 34.4
TWI53G1689 Tripterygium wilfordii HOM05D004626 ORTHO05D005185 5.0e-13 78.6 129 35.7
TAR381G1723 Trochodendron aralioides HOM05D004626 ORTHO05D005185 5.0e-13 78.6 128 34.4
MSTRG.2568 Avicennia marina HOM05D004626 ORTHO05D005185 6.5e-13 78.2 130 34.6
AUR62002008 Chenopodium quinoa HOM05D004626 ORTHO05D005185 6.5e-13 78.2 129 32.6
AUR62003794 Chenopodium quinoa HOM05D004626 ORTHO05D005185 6.5e-13 78.2 129 32.6
MD01G1030100 Malus domestica HOM05D004626 ORTHO05D005185 8.5e-13 77.8 133 32.3
Nn2g14516 Nelumbo nucifera HOM05D004626 ORTHO05D005185 8.5e-13 77.8 128 35.2
Sc16g0005030 Simmondsia chinensis HOM05D004626 ORTHO05D005185 8.5e-13 77.8 128 35.9
GSVIVG01002466001 Vitis vinifera HOM05D004626 ORTHO05D005185 8.5e-13 77.8 128 34.4
Atru.chr4.63 Acer truncatum HOM05D004626 ORTHO05D005185 1.1e-12 77.4 126 34.1
CSS0038413 Camellia sinensis var. sinensis HOM05D004626 ORTHO05D005185 1.1e-12 77.4 87 41.4
Ah.02g122510 Amaranthus hybridus HOM05D004626 ORTHO05D005185 1.4e-12 77.0 129 32.6
Cpa.g.sc974.3 Carica papaya HOM05D004626 ORTHO05D005185 1.4e-12 77.0 87 40.2
Dinv21908 Davidia involucrata HOM05D004626 ORTHO05D005185 1.4e-12 77.0 87 40.2
Lj4A891T55 Lonicera japonica HOM05D004626 ORTHO05D005185 1.4e-12 77.0 133 33.8
MD15G1324000 Malus domestica HOM05D004626 ORTHO05D005185 1.4e-12 77.0 133 32.3
QL06p049512 Quercus lobata HOM05D004626 ORTHO05D005185 1.4e-12 77.0 128 33.6
THA.LOC104818439 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 1.4e-12 77.0 79 48.1
BcaNung03404 Brassica carinata HOM05D004626 ORTHO05D005185 1.9e-12 76.6 88 39.8
BolC7t46695H Brassica oleracea HOM05D004626 ORTHO05D005185 1.9e-12 76.6 88 39.8
CAN.G222.27 Capsicum annuum HOM05D004626 ORTHO05D005185 1.9e-12 76.6 136 32.4
Lalb_Chr11g0075381 Lupinus albus HOM05D004626 ORTHO05D005185 1.9e-12 76.6 128 32.0
Aqoxy6G00796 Aquilegia oxysepala HOM05D004626 ORTHO05D005185 2.5e-12 76.3 133 32.3
Cc07_g15200 Coffea canephora HOM05D004626 ORTHO05D005185 2.5e-12 76.3 139 33.1
Duzib264G0371 Durio zibethinus HOM05D004626 ORTHO05D005185 2.5e-12 76.3 135 33.3
Lj6g0027398 Lotus japonicus HOM05D004626 ORTHO05D005185 2.5e-12 76.3 137 34.3
ATR0693G394 Amborella trichopoda HOM05D004626 ORTHO05D005185 3.2e-12 75.9 87 39.1
CANSAT01G3216 Cannabis sativa HOM05D004626 ORTHO05D005185 3.2e-12 75.9 128 35.2
ECA232G0540 Erigeron canadensis HOM05D004626 ORTHO05D001353 3.2e-12 75.9 136 31.6
FAN26G0520 Fragaria x ananassa HOM05D004626 ORTHO05D005185 3.2e-12 75.9 131 34.4
HanXRQChr10g0305361 Helianthus annuus HOM05D004626 ORTHO05D005185 3.2e-12 75.9 142 33.8
MBI05_g19353_MAGBIO Magnolia biondii HOM05D004626 ORTHO05D005185 3.2e-12 75.9 87 39.1
Prupe.6G187100 Prunus persica HOM05D004626 ORTHO05D005185 3.2e-12 75.9 87 40.2
Actinidia28864 Actinidia chinensis HOM05D004626 ORTHO05D005185 5.5e-12 75.1 87 40.2
Migut.H02360 Erythranthe guttata HOM05D004626 ORTHO05D005185 5.5e-12 75.1 87 40.2
FAN19G0994 Fragaria x ananassa HOM05D004626 ORTHO05D005185 5.5e-12 75.1 131 34.4
FAN23G0429 Fragaria x ananassa HOM05D004626 ORTHO05D005185 5.5e-12 75.1 131 34.4
RcHm_v2.0_Chr2g0113491 Rosa chinensis HOM05D004626 ORTHO05D005185 5.5e-12 75.1 87 37.9
Solyc11g011140.2 Solanum lycopersicum HOM05D004626 ORTHO05D005185 7.2e-12 74.7 87 40.2
Sopen11g005900 Solanum pennellii HOM05D004626 ORTHO05D005185 7.2e-12 74.7 87 40.2
Manes.12G134800 Manihot esculenta HOM05D004626 ORTHO05D005185 9.4e-12 74.3 137 30.7
Sabra05G0062000 Salix brachista HOM05D004626 ORTHO05D005185 9.4e-12 74.3 114 35.1
TAR381G1658 Trochodendron aralioides HOM05D004626 ORTHO05D005185 9.4e-12 74.3 87 39.1
Dinv13189 Davidia involucrata HOM05D004626 ORTHO05D005185 1.2e-11 73.9 87 39.1
Nitab4.5_0002169g0010 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.2e-11 73.9 87 39.1
Lsat_1_v5_gn_4_141400 Lactuca sativa HOM05D004626 ORTHO05D005185 1.6e-11 73.6 87 40.2
Nitab4.5_0000004g0320 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.6e-11 73.6 87 39.1
Nitab4.5_0003026g0030 Nicotiana tabacum HOM05D004626 ORTHO05D005185 1.6e-11 73.6 87 39.1
Os07g0415200 Oryza sativa ssp. japonica HOM05D004626 ORTHO05D005185 1.6e-11 73.6 88 43.2
SHI34078 Sapria himalayana HOM05D004626 ORTHO05D005185 1.6e-11 73.6 86 39.5
FvH4_1g20880 Fragaria vesca HOM05D004626 ORTHO05D005185 2.1e-11 73.2 131 33.6
PSO541G2613 Papaver somniferum HOM05D004626 ORTHO05D005185 2.1e-11 73.2 136 32.4
PSO781G0234 Papaver somniferum HOM05D004626 ORTHO05D005185 3.6e-11 72.4 136 32.4
Zm00001eb120260 Zea mays HOM05D004626 ORTHO05D005185 3.6e-11 72.4 88 42.0
PGR102G1283 Punica granatum HOM05D004626 ORTHO05D005185 1.0e-10 70.9 144 32.6
HPP92_019309 Vanilla planifolia HOM05D004626 ORTHO05D005185 1.0e-10 70.9 119 36.1
Rhsim08G0010500 Rhododendron simsii HOM05D004626 ORTHO05D005185 1.8e-10 70.1 87 37.9
THA.LOC104807692 Tarenaya hassleriana HOM05D004626 ORTHO05D005185 1.8e-10 70.1 134 32.8
Nitab4.5_0012380g0020 Nicotiana tabacum HOM05D004626 ORTHO05D005185 2.3e-10 69.7 87 39.1
TPR.G17173 Trifolium pratense HOM05D004626 ORTHO05D005185 2.3e-10 69.7 81 39.5
FAN28G0327 Fragaria x ananassa HOM05D004626 ORTHO05D005185 5.2e-10 68.6 83 37.3
Cfa005597 Carpinus fangiana HOM05D004626 ORTHO05D005185 1.1e-09 67.4 87 41.4
Hma1.2p1_0308F.1_g120190 Hydrangea macrophylla HOM05D004626 ORTHO05D005185 1.5e-09 67.0 119 33.6
VMungo1383G1685 Vigna mungo HOM05D004626 ORTHO05D005185 4.4e-09 65.5 55 52.7
CiPaw.05G035400 Carya illinoinensis HOM05D004626 ORTHO05D005185 7.4e-09 64.7 85 37.6
QL11p021166 Quercus lobata HOM05D004626 ORTHO05D005185 9.7e-09 64.3 88 40.9
arahy.Tifrunner.gnm1.ann1.VCFG2H Arachis hypogaea HOM05D004626 ORTHO05D005185 1.7e-08 63.5 55 52.7
QL11p020935 Quercus lobata HOM05D004626 ORTHO05D005185 1.7e-08 63.5 88 40.9
AagrBONN_evm.TU.Sc2ySwM_117.40 Anthoceros agrestis HOM05D004626 ORTHO05D005185 2.2e-08 63.2 91 40.7
MD06G1167700 Malus domestica HOM05D004626 ORTHO05D005185 2.8e-08 62.8 87 33.3
SMO134G0295 Selaginella moellendorffii HOM05D004626 ORTHO05D005185 2.8e-08 62.8 89 41.6
DCAR_001782 Daucus carota HOM05D004626 ORTHO05D005185 3.7e-08 62.4 92 39.1
Glyma.05G178600 Glycine max HOM05D004626 ORTHO05D005185 1.1e-07 60.8 85 36.5
Glyma.08G135700 Glycine max HOM05D004626 ORTHO05D005185 1.8e-07 60.1 77 40.3
Lalb_Chr12g0203831 Lupinus albus HOM05D004626 ORTHO05D005185 5.3e-07 58.5 80 38.8
Lj4g0016107 Lotus japonicus HOM05D004626 ORTHO05D005185 9.1e-07 57.8 60 40.0
Peaxi162Scf00611g00021 Petunia axillaris HOM05D004626 ORTHO05D005185 2.0e-06 56.6 48 52.1
Phvul.002G256100 Phaseolus vulgaris HOM05D004626 ORTHO05D005185 2.0e-06 56.6 73 41.1
Nitab4.5_0000308g0400 Nicotiana tabacum HOM05D004626 ORTHO05D005185 4.5e-06 55.5 48 50.0


User provided reference genes

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