Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G851 Micromonas commoda HOM05D005463 ORTHO05D044100 1.6e-132 476.1 235 100.0
Cre12.g538650 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D044100 2.0e-58 229.9 234 50.9
SGA_v2.0_scaffold4G02241 Striga asiatica HOM05D005463 ORTHO05D006900 2.8e-25 119.8 241 32.8
Mapoly0087s0054 Marchantia polymorpha HOM05D005463 ORTHO05D006900 4.9e-25 119.0 242 33.5
Nn7g36051 Nelumbo nucifera HOM05D005463 ORTHO05D006900 4.9e-25 119.0 241 32.4
FAN06G3192 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.1e-24 117.9 241 32.0
CBR_g4488 Chara braunii HOM05D005463 ORTHO05D006900 1.4e-24 117.5 241 32.8
FAN03G0244 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.4e-24 117.5 241 31.5
Migut.B01346 Erythranthe guttata HOM05D005463 ORTHO05D006900 3.1e-24 116.3 242 32.6
RcHm_v2.0_Chr6g0277781 Rosa chinensis HOM05D005463 ORTHO05D006900 3.1e-24 116.3 241 32.0
Glyma.08G150800 Glycine max HOM05D005463 ORTHO05D006900 4.1e-24 115.9 241 31.1
Lj3g0018047 Lotus japonicus HOM05D005463 ORTHO05D006900 5.4e-24 115.5 241 32.0
Phvul.005G038200 Phaseolus vulgaris HOM05D005463 ORTHO05D006900 5.4e-24 115.5 242 31.4
Gohir.D10G064800 Gossypium hirsutum HOM05D005463 ORTHO05D006900 7.0e-24 115.2 241 32.0
Duzib114G0804 Durio zibethinus HOM05D005463 ORTHO05D006900 9.2e-24 114.8 241 32.0
Potri.001G226900 Populus trichocarpa HOM05D005463 ORTHO05D006900 9.2e-24 114.8 241 31.1
Sabra16G0135300 Salix brachista HOM05D005463 ORTHO05D006900 9.2e-24 114.8 241 31.5
Manes.10G148700 Manihot esculenta HOM05D005463 ORTHO05D006900 1.2e-23 114.4 241 32.0
Thecc.01G415300 Theobroma cacao HOM05D005463 ORTHO05D006900 1.2e-23 114.4 241 32.0
Cc02_g27320 Coffea canephora HOM05D005463 ORTHO05D006900 1.6e-23 114.0 242 31.8
Dinv43914 Davidia involucrata HOM05D005463 ORTHO05D006900 1.6e-23 114.0 241 31.1
Eucgr.H00541 Eucalyptus grandis HOM05D005463 ORTHO05D006900 1.6e-23 114.0 241 30.7
MD07G1002800 Malus domestica HOM05D005463 ORTHO05D006900 1.6e-23 114.0 241 31.5
PGR083G1038 Punica granatum HOM05D005463 ORTHO05D006900 1.6e-23 114.0 241 30.3
VMungo1080G0018 Vigna mungo HOM05D005463 ORTHO05D006900 1.6e-23 114.0 242 31.4
Gorai.011G068800 Gossypium raimondii HOM05D005463 ORTHO05D006900 2.0e-23 113.6 241 30.7
TAR369G0415 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.0e-23 113.6 241 31.5
CiPaw.13G001800 Carya illinoinensis HOM05D005463 ORTHO05D006900 2.7e-23 113.2 241 31.5
Ciclev10031826m.g Citrus clementina HOM05D005463 ORTHO05D006900 2.7e-23 113.2 241 31.1
HanXRQChr16g0520501 Helianthus annuus HOM05D005463 ORTHO05D006900 2.7e-23 113.2 239 33.1
Lj7A567T29 Lonicera japonica HOM05D005463 ORTHO05D006900 2.7e-23 113.2 241 31.1
TWI77G0271 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.7e-23 113.2 242 31.0
ATR0709G016 Amborella trichopoda HOM05D005463 ORTHO05D006900 3.5e-23 112.8 241 30.7
Glyma.15G270200 Glycine max HOM05D005463 ORTHO05D006900 3.5e-23 112.8 241 30.7
ClCG09G003850 Citrullus lanatus HOM05D005463 ORTHO05D006900 4.5e-23 112.5 241 31.5
Lsat_1_v5_gn_4_46300 Lactuca sativa HOM05D005463 ORTHO05D006900 4.5e-23 112.5 241 32.0
QL04p003263 Quercus lobata HOM05D005463 ORTHO05D006900 4.5e-23 112.5 241 31.5
RcHm_v2.0_Chr1g0314251 Rosa chinensis HOM05D005463 ORTHO05D006900 4.5e-23 112.5 241 31.5
Ah.05g166840 Amaranthus hybridus HOM05D005463 ORTHO05D006900 5.9e-23 112.1 241 32.0
AUR62034961 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.9e-23 112.1 242 32.2
AUR62035771 Chenopodium quinoa HOM05D005463 ORTHO05D006900 5.9e-23 112.1 242 32.2
CAN.G1393.12 Capsicum annuum HOM05D005463 ORTHO05D006900 7.7e-23 111.7 241 31.5
DCAR_006305 Daucus carota HOM05D005463 ORTHO05D006900 7.7e-23 111.7 241 30.7
GSVIVG01032030001 Vitis vinifera HOM05D005463 ORTHO05D006900 7.7e-23 111.7 241 31.1
Haze_03251 Corylus avellana HOM05D005463 ORTHO05D006900 1.0e-22 111.3 241 30.7
SMO174G0240 Selaginella moellendorffii HOM05D005463 ORTHO05D006900 1.0e-22 111.3 242 31.8
THA.LOC104819056 Tarenaya hassleriana HOM05D005463 ORTHO05D006900 1.0e-22 111.3 241 31.1
Solyc01g086650.3 Solanum lycopersicum HOM05D005463 ORTHO05D006900 1.3e-22 110.9 241 31.1
Sopen01g033670 Solanum pennellii HOM05D005463 ORTHO05D006900 1.3e-22 110.9 241 31.1
PGSC0003DMG400025254 Solanum tuberosum HOM05D005463 ORTHO05D006900 1.3e-22 110.9 241 31.1
MELO3C023520.2 Cucumis melo HOM05D005463 ORTHO05D006900 1.7e-22 110.5 241 31.1
CsaV3_7G031380 Cucumis sativus L. HOM05D005463 ORTHO05D006900 1.7e-22 110.5 241 31.1
Nitab4.5_0006866g0010 Nicotiana tabacum HOM05D005463 ORTHO05D006900 1.7e-22 110.5 241 29.9
vmacro13633 Vaccinium macrocarpon HOM05D005463 ORTHO05D006900 1.7e-22 110.5 242 31.4
MBI07_g21780_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 2.3e-22 110.2 242 31.0
Psat5g207280 Pisum sativum HOM05D005463 ORTHO05D006900 2.3e-22 110.2 241 31.1
TAR623G0821 Trochodendron aralioides HOM05D005463 ORTHO05D006900 2.3e-22 110.2 241 30.3
Actinidia32326 Actinidia chinensis HOM05D005463 ORTHO05D006900 2.9e-22 109.8 243 31.3
Zm00001eb159150 Zea mays HOM05D005463 ORTHO05D006900 2.9e-22 109.8 240 32.1
Prupe.2G005900 Prunus persica HOM05D005463 ORTHO05D006900 3.8e-22 109.4 241 31.1
Cfa010722 Carpinus fangiana HOM05D005463 ORTHO05D006900 5.0e-22 109.0 241 30.3
Oeu047540.1 Olea europaea HOM05D005463 ORTHO05D006900 5.0e-22 109.0 241 30.7
Sc20g0006350 Simmondsia chinensis HOM05D005463 ORTHO05D006900 5.0e-22 109.0 241 31.1
MBI19_g42082_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 6.6e-22 108.6 242 31.0
Medtr7g034345 Medicago truncatula HOM05D005463 ORTHO05D006900 6.6e-22 108.6 241 30.7
EL10Ac1g02324 Beta vulgaris HOM05D005463 ORTHO05D006900 8.6e-22 108.2 241 31.1
Ca_22203_v3 Cicer arietinum L. HOM05D005463 ORTHO05D006900 8.6e-22 108.2 241 30.7
COL.COLO4_23908 Corchorus olitorius HOM05D000259 ORTHO05D000155 8.6e-22 108.2 230 32.2
Nitab4.5_0002239g0050 Nicotiana tabacum HOM05D005463 ORTHO05D006900 8.6e-22 108.2 241 29.5
PRCOL_00005728 Prasinoderma coloniale HOM05D005463 ORTHO05D006900 8.6e-22 108.2 240 31.2
Duzib138G0896 Durio zibethinus HOM05D005463 ORTHO05D006900 1.1e-21 107.8 241 31.5
Lalb_Chr25g0283441 Lupinus albus HOM05D005463 ORTHO05D006900 1.1e-21 107.8 241 30.3
PSO541G2837 Papaver somniferum HOM05D005463 ORTHO05D006900 1.1e-21 107.8 241 30.7
CSS0012415 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.5e-21 107.5 241 30.3
CSS0041052 Camellia sinensis var. sinensis HOM05D005463 ORTHO05D006900 1.5e-21 107.5 241 30.3
Peaxi162Scf00058g00512 Petunia axillaris HOM05D005463 ORTHO05D006900 1.9e-21 107.1 241 31.5
Pp3c10_8730 Physcomitrium patens HOM05D005463 ORTHO05D006900 1.9e-21 107.1 241 31.5
Sed0008391 Sechium edule HOM05D005463 ORTHO05D006900 1.9e-21 107.1 242 30.6
BcaB02g07924 Brassica carinata HOM05D005463 ORTHO05D006900 2.5e-21 106.7 242 31.0
ECA234G3252 Erigeron canadensis HOM05D005463 ORTHO05D006900 5.6e-21 105.5 240 31.2
Thhalv10027799m.g Eutrema salsugineum HOM05D005463 ORTHO05D006900 7.3e-21 105.1 242 30.2
Hund11459 Selenicereus undatus HOM05D005463 ORTHO05D006900 7.3e-21 105.1 242 31.4
Carub.0007s3465 Capsella rubella HOM05D005463 ORTHO05D006900 9.5e-21 104.8 242 30.2
CARHR213670 Cardamine hirsuta HOM05D005463 ORTHO05D006900 9.5e-21 104.8 242 30.2
CDE09G0814 Ceratophyllum demersum HOM05D005463 ORTHO05D006900 9.5e-21 104.8 241 29.5
Cre09.g396401 Chlamydomonas reinhardtii HOM05D005463 ORTHO05D006900 9.5e-21 104.8 241 31.5
TPR.G12169 Trifolium pratense HOM05D005463 ORTHO05D006900 9.5e-21 104.8 241 29.9
Aqoxy2G00060 Aquilegia oxysepala HOM05D005463 ORTHO05D006900 1.2e-20 104.4 241 29.5
BcaB06g27564 Brassica carinata HOM05D005463 ORTHO05D006900 1.2e-20 104.4 242 30.6
CANSAT11G2548 Cannabis sativa HOM05D005463 ORTHO05D006900 1.2e-20 104.4 241 30.3
FvH4_7g00480 Fragaria vesca HOM05D005463 ORTHO05D006900 1.2e-20 104.4 200 33.5
FAN10G2111 Fragaria x ananassa HOM05D005463 ORTHO05D006900 1.2e-20 104.4 200 33.5
Zm00001eb358930 Zea mays HOM05D005463 ORTHO05D006900 1.2e-20 104.4 236 31.4
AL7G48760 Arabidopsis lyrata HOM05D005463 ORTHO05D006900 1.6e-20 104.0 242 30.2
arahy.Tifrunner.gnm1.ann1.35ND81 Arachis hypogaea HOM05D005463 ORTHO05D006900 1.6e-20 104.0 201 33.8
Aa31sc48G90 Aethionema arabicum HOM05D005463 ORTHO05D006900 2.1e-20 103.6 242 30.6
AT5G40850 Arabidopsis thaliana HOM05D005463 ORTHO05D006900 2.1e-20 103.6 242 29.8
BcaC02g08999 Brassica carinata HOM05D005463 ORTHO05D006900 2.1e-20 103.6 242 30.6
BolC4t26367H Brassica oleracea HOM05D005463 ORTHO05D006900 2.1e-20 103.6 242 30.6
Sp7g01080 Schrenkiella parvula HOM05D005463 ORTHO05D006900 2.1e-20 103.6 242 30.2
SalBow4G1191 Salvia bowleyana HOM05D005463 ORTHO05D006900 2.8e-20 103.2 201 33.8
C04p47660 Brassica napus HOM05D005463 ORTHO05D006900 4.7e-20 102.4 242 30.2
A04p13900 Brassica napus HOM05D005463 ORTHO05D006900 6.1e-20 102.1 242 30.2
BraA04t17055Z Brassica rapa HOM05D005463 ORTHO05D006900 6.1e-20 102.1 242 30.2
Medtr3g026780 Medicago truncatula HOM05D005463 ORTHO05D006900 6.1e-20 102.1 201 33.3
Rhsim07G0052500 Rhododendron simsii HOM05D005463 ORTHO05D006900 8.0e-20 101.7 268 30.6
Manes.07G002600 Manihot esculenta HOM05D005463 ORTHO05D006900 1.8e-19 100.5 200 33.0
MCO12G109 Micromonas commoda HOM05D005463 ORTHO05D006900 1.8e-19 100.5 254 29.9
SGA_v2.0_scaffold95G28785 Striga asiatica HOM05D005463 ORTHO05D006900 2.3e-19 100.1 275 28.7
TWI74G0716 Tripterygium wilfordii HOM05D005463 ORTHO05D006900 2.3e-19 100.1 201 33.3
Cfa024173 Carpinus fangiana HOM05D005463 ORTHO05D006900 3.0e-19 99.8 236 30.1
HPP92_020287 Vanilla planifolia HOM05D005463 ORTHO05D006900 5.2e-19 99.0 241 29.5
ATR1100G030 Amborella trichopoda HOM05D005463 ORTHO05D006900 1.5e-18 97.4 200 31.5
unitig_61.g26444 Utricularia gibba HOM05D005463 ORTHO05D006900 2.0e-18 97.1 157 35.7
SEGI_24059 Sequoiadendron giganteum HOM05D005463 ORTHO05D006900 2.6e-18 96.7 133 40.6
MBI19_g47932_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 1.3e-17 94.4 242 29.3
AagrBONN_evm.TU.Sc2ySwM_344.3224 Anthoceros agrestis HOM05D005463 ORTHO05D006900 2.0e-15 87.0 122 41.0
Gohir.A10G063300 Gossypium hirsutum HOM05D005463 ORTHO05D006900 7.8e-15 85.1 118 39.0
Os01g0631200 Oryza sativa ssp. japonica HOM05D005463 ORTHO05D006900 2.1e-12 77.0 197 29.9
Prupe.I005100 Prunus persica HOM05D005463 ORTHO05D006900 3.6e-12 76.3 117 38.5
Dinv43913 Davidia involucrata HOM05D005463 ORTHO05D006900 1.2e-10 71.2 94 41.5
MBI10_g23170_MAGBIO Magnolia biondii HOM05D005463 ORTHO05D006900 4.4e-10 69.3 217 26.7
SMO169G0295 Selaginella moellendorffii HOM05D001587 ORTHO05D008791 4.6e-07 59.3 242 23.6
Cpa.g.sc1133.2 Carica papaya HOM05D005463 ORTHO05D006900 1.3e-06 57.8 241 24.9


User provided reference genes

Program Settings