Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G643 Micromonas commoda HOM05D004800 ORTHO05D005842 1.7e-74 282.7 154 100.0
SalBow4G3208 Salvia bowleyana HOM05D004800 ORTHO05D005842 1.1e-12 77.4 159 31.4
Pp3c2_14120 Physcomitrium patens HOM05D004800 ORTHO05D005842 1.2e-11 73.9 160 30.0
Mapoly0130s0032 Marchantia polymorpha HOM05D004800 ORTHO05D005842 1.3e-10 70.5 117 35.9
PGR044G1902 Punica granatum HOM05D004800 ORTHO05D005842 1.7e-10 70.1 118 32.2
AL6G36710 Arabidopsis lyrata HOM05D004800 ORTHO05D005842 8.4e-10 67.8 114 34.2
HanXRQChr13g0411011 Helianthus annuus HOM05D004800 ORTHO05D005842 1.4e-09 67.0 119 35.3
TWI32G1317 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.4e-09 67.0 114 35.1
Atru.chr7.2559 Acer truncatum HOM05D004800 ORTHO05D005842 2.4e-09 66.2 118 34.7
AT5G25080 Arabidopsis thaliana HOM05D004800 ORTHO05D005842 3.2e-09 65.9 114 33.3
AagrBONN_evm.TU.Sc2ySwM_368.3173 Anthoceros agrestis HOM05D004800 ORTHO05D005842 4.2e-09 65.5 122 33.6
BcaNung02298 Brassica carinata HOM05D004800 ORTHO05D005842 4.2e-09 65.5 114 32.5
Ciclev10009140m.g Citrus clementina HOM05D004800 ORTHO05D005842 5.5e-09 65.1 114 33.3
BcaNung03198 Brassica carinata HOM05D004800 ORTHO05D005842 7.1e-09 64.7 114 32.5
Eucgr.C02606 Eucalyptus grandis HOM05D004800 ORTHO05D005842 7.1e-09 64.7 117 35.0
Lsat_1_v5_gn_5_49760 Lactuca sativa HOM05D004800 ORTHO05D005842 9.3e-09 64.3 114 32.5
Thecc.09G015200 Theobroma cacao HOM05D004800 ORTHO05D005842 9.3e-09 64.3 118 33.1
A06p35840 Brassica napus HOM05D004800 ORTHO05D005842 1.2e-08 63.9 114 31.6
BraA06t26509Z Brassica rapa HOM05D004800 ORTHO05D005842 1.2e-08 63.9 114 31.6
Haze_21408 Corylus avellana HOM05D004800 ORTHO05D005842 1.2e-08 63.9 152 29.6
Sed0002840 Sechium edule HOM05D004800 ORTHO05D005842 1.2e-08 63.9 114 32.5
MSTRG.25830 Avicennia marina HOM05D004800 ORTHO05D005842 2.1e-08 63.2 114 30.7
Carub.0006s2291 Capsella rubella HOM05D004800 ORTHO05D005842 2.1e-08 63.2 114 33.3
Cfa013047 Carpinus fangiana HOM05D004800 ORTHO05D005842 2.1e-08 63.2 152 29.6
SHI21074 Sapria himalayana HOM05D004800 ORTHO05D005842 2.1e-08 63.2 119 31.1
Cfa024124 Carpinus fangiana HOM05D004800 ORTHO05D005842 2.7e-08 62.8 162 29.0
SEGI_18119 Sequoiadendron giganteum HOM05D004800 ORTHO05D005842 2.7e-08 62.8 103 32.0
TAR625G0162 Trochodendron aralioides HOM05D004800 ORTHO05D005842 2.7e-08 62.8 115 31.3
Eucgr.L02918 Eucalyptus grandis HOM05D004800 ORTHO05D005842 3.5e-08 62.4 117 34.2
Thhalv10004902m.g Eutrema salsugineum HOM05D004800 ORTHO05D005842 3.5e-08 62.4 114 29.8
Gohir.A05G060000 Gossypium hirsutum HOM05D004800 ORTHO05D005842 3.5e-08 62.4 118 32.2
TAR625G0311 Trochodendron aralioides HOM05D004800 ORTHO05D005842 3.5e-08 62.4 115 31.3
unitig_749.g13819 Utricularia gibba HOM05D004800 ORTHO05D005842 3.5e-08 62.4 114 31.6
CiPaw.08G005800 Carya illinoinensis HOM05D004800 ORTHO05D005842 4.6e-08 62.0 114 32.5
COL.COLO4_18955 Corchorus olitorius HOM05D004800 ORTHO05D005842 4.6e-08 62.0 118 32.2
Lj1g0022737 Lotus japonicus HOM05D004800 ORTHO05D005842 4.6e-08 62.0 117 34.2
Sc09g0010680 Simmondsia chinensis HOM05D004800 ORTHO05D005842 4.6e-08 62.0 114 33.3
THA.LOC104814986 Tarenaya hassleriana HOM05D004800 ORTHO05D005842 4.6e-08 62.0 114 29.8
GSVIVG01035974001 Vitis vinifera HOM05D004800 ORTHO05D005842 4.6e-08 62.0 96 37.5
CBR_g8579 Chara braunii HOM05D004800 ORTHO05D005842 6.0e-08 61.6 144 29.9
Nn2g12411 Nelumbo nucifera HOM05D004800 ORTHO05D005842 7.9e-08 61.2 114 32.5
Potri.006G264700 Populus trichocarpa HOM05D004800 ORTHO05D005842 7.9e-08 61.2 150 30.7
SMO140G0030 Selaginella moellendorffii HOM05D004800 ORTHO05D005842 7.9e-08 61.2 122 32.0
Manes.03G008100 Manihot esculenta HOM05D004800 ORTHO05D005842 1.0e-07 60.8 158 26.6
BcaNung06718 Brassica carinata HOM05D004800 ORTHO05D005842 1.3e-07 60.5 119 31.9
ECA240G1139 Erigeron canadensis HOM05D004800 ORTHO05D005842 1.3e-07 60.5 114 30.7
MD08G1055900 Malus domestica HOM05D004800 ORTHO05D005842 1.3e-07 60.5 118 31.4
SGA_v2.0_scaffold147G36341 Striga asiatica HOM05D004800 ORTHO05D005842 1.3e-07 60.5 152 27.0
CANSAT25G3039 Cannabis sativa HOM05D004800 ORTHO05D005842 1.8e-07 60.1 159 28.3
Cpa.g.sc148.17 Carica papaya HOM05D004800 ORTHO05D005842 1.8e-07 60.1 171 26.3
Dinv13413 Davidia involucrata HOM05D004800 ORTHO05D005842 1.8e-07 60.1 114 31.6
Rhsim07G0165700 Rhododendron simsii HOM05D004800 ORTHO05D005842 1.8e-07 60.1 114 30.7
Migut.A00358 Erythranthe guttata HOM05D004800 ORTHO05D005842 2.3e-07 59.7 114 28.9
Glyma.06G061100 Glycine max HOM05D004800 ORTHO05D005842 2.3e-07 59.7 114 32.5
Gohir.D05G062200 Gossypium hirsutum HOM05D004800 ORTHO05D005842 2.3e-07 59.7 154 28.6
ATR0580G220 Amborella trichopoda HOM05D004800 ORTHO05D005842 3.0e-07 59.3 156 30.1
CARHR188420 Cardamine hirsuta HOM05D004800 ORTHO05D005842 3.9e-07 58.9 118 29.7
Gorai.009G063300 Gossypium raimondii HOM05D004800 ORTHO05D005842 3.9e-07 58.9 154 28.6
CDE02G3876 Ceratophyllum demersum HOM05D004800 ORTHO05D005842 6.7e-07 58.2 116 32.8
DCAR_022862 Daucus carota HOM05D004800 ORTHO05D005842 6.7e-07 58.2 114 30.7
Hma1.2p1_0389F.1_g142470 Hydrangea macrophylla HOM05D004800 ORTHO05D005842 6.7e-07 58.2 114 28.9
Manes.16G130200 Manihot esculenta HOM05D004800 ORTHO05D005842 6.7e-07 58.2 152 29.6
Sp2g22450 Schrenkiella parvula HOM05D004800 ORTHO05D005842 6.7e-07 58.2 114 28.9
Aa31LG11G4300 Aethionema arabicum HOM05D004800 ORTHO05D005842 8.7e-07 57.8 150 26.7
Duzib168G1619 Durio zibethinus HOM05D004800 ORTHO05D005842 8.7e-07 57.8 154 28.6
Sabra06G0206800 Salix brachista HOM05D004800 ORTHO05D005842 1.1e-06 57.4 159 29.6
TWI34G0615 Tripterygium wilfordii HOM05D004800 ORTHO05D005842 1.1e-06 57.4 114 30.7
Dinv08182 Davidia involucrata HOM05D004800 ORTHO05D005842 1.5e-06 57.0 114 30.7
Lj7A735T34 Lonicera japonica HOM05D004800 ORTHO05D005842 1.5e-06 57.0 155 27.1
Prupe.1G394400 Prunus persica HOM05D004800 ORTHO05D005842 1.5e-06 57.0 156 28.2
QL02p018802 Quercus lobata HOM05D004800 ORTHO05D005842 1.5e-06 57.0 152 25.7
PSO339G1021 Papaver somniferum HOM05D004800 ORTHO05D005842 1.9e-06 56.6 114 30.7
PSO384G2235 Papaver somniferum HOM05D004800 ORTHO05D005842 1.9e-06 56.6 114 30.7
Aqoxy7G03382 Aquilegia oxysepala HOM05D004800 ORTHO05D005842 2.5e-06 56.2 116 31.9
A09p06310 Brassica napus HOM05D004800 ORTHO05D005842 3.3e-06 55.8 112 30.4
BraA09t36276Z Brassica rapa HOM05D004800 ORTHO05D005842 3.3e-06 55.8 112 30.4
CsaV3_4G036490 Cucumis sativus L. HOM05D004800 ORTHO05D005842 3.3e-06 55.8 114 30.7
CAN.G333.3 Capsicum annuum HOM05D004800 ORTHO05D005842 4.3e-06 55.5 114 27.2
ClCG05G016220 Citrullus lanatus HOM05D004800 ORTHO05D005842 4.3e-06 55.5 114 31.6
Cc08_g07200 Coffea canephora HOM05D004800 ORTHO05D005842 4.3e-06 55.5 114 28.1
MELO3C016954.2 Cucumis melo HOM05D004800 ORTHO05D005842 4.3e-06 55.5 114 31.6
Phvul.009G086600 Phaseolus vulgaris HOM05D004800 ORTHO05D005842 4.3e-06 55.5 114 30.7
vmacro05151 Vaccinium macrocarpon HOM05D004800 ORTHO05D005842 4.3e-06 55.5 153 27.5
Oeu001621.3 Olea europaea HOM05D004800 ORTHO05D005842 5.6e-06 55.1 152 26.3
HPP92_017174 Vanilla planifolia HOM05D004800 ORTHO05D005842 7.4e-06 54.7 114 30.7
VMungo1309G1055 Vigna mungo HOM05D004800 ORTHO05D005842 7.4e-06 54.7 114 30.7
CSS0020729 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 9.6e-06 54.3 154 26.0
CSS0041988 Camellia sinensis var. sinensis HOM05D004800 ORTHO05D005842 9.6e-06 54.3 154 26.0


User provided reference genes

Program Settings