Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G622 Micromonas commoda HOM05D003624 ORTHO05D004188 2.9e-85 318.5 165 100.0
SMO347G0189 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 9.6e-12 74.3 119 39.5
Cre16.g654350 Chlamydomonas reinhardtii HOM05D003624 ORTHO05D004188 1.6e-11 73.6 120 38.3
SMO142G0061 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 1.6e-11 73.6 120 36.7
BcaC01g01521 Brassica carinata HOM05D003624 ORTHO05D004188 3.7e-11 72.4 121 33.9
A08p00650 Brassica napus HOM05D003624 ORTHO05D004188 3.7e-11 72.4 121 33.9
C03p92710 Brassica napus HOM05D003624 ORTHO05D004188 3.7e-11 72.4 121 33.9
BolSC126t60220H Brassica oleracea HOM05D003624 ORTHO05D004188 3.7e-11 72.4 121 33.9
BraA08t32123Z Brassica rapa HOM05D003624 ORTHO05D004188 3.7e-11 72.4 121 33.9
Sp1g41070 Schrenkiella parvula HOM05D003624 ORTHO05D004188 3.7e-11 72.4 133 33.8
SMO358G0194 Selaginella moellendorffii HOM05D003624 ORTHO05D004188 6.2e-11 71.6 148 33.8
Cpa.g.sc1.400 Carica papaya HOM05D003624 ORTHO05D004188 1.4e-10 70.5 137 32.8
Aa31LG10G790 Aethionema arabicum HOM05D003624 ORTHO05D004188 3.1e-10 69.3 133 32.3
BcaB02g10822 Brassica carinata HOM05D003624 ORTHO05D004188 3.1e-10 69.3 121 33.9
AT1G55460 Arabidopsis thaliana HOM05D003624 ORTHO05D004188 4.0e-10 68.9 161 31.7
C06p16060 Brassica napus HOM05D003624 ORTHO05D004188 4.0e-10 68.9 121 34.7
CARHR218910 Cardamine hirsuta HOM05D003624 ORTHO05D004188 4.0e-10 68.9 175 30.9
MELO3C014877.2 Cucumis melo HOM05D003624 ORTHO05D004188 4.0e-10 68.9 163 31.9
CsaV3_3G027090 Cucumis sativus L. HOM05D003624 ORTHO05D004188 4.0e-10 68.9 143 33.6
BcaC08g44198 Brassica carinata HOM05D003624 ORTHO05D004188 5.3e-10 68.6 121 34.7
A05p17470 Brassica napus HOM05D003624 ORTHO05D004188 5.3e-10 68.6 121 34.7
BolC6t36805H Brassica oleracea HOM05D003624 ORTHO05D004188 5.3e-10 68.6 121 34.7
BraA05t20642Z Brassica rapa HOM05D003624 ORTHO05D004188 5.3e-10 68.6 121 34.7
Cpa.g.sc80.54 Carica papaya HOM05D003624 ORTHO05D004188 5.3e-10 68.6 121 33.9
HanXRQChr08g0234751 Helianthus annuus HOM05D003624 ORTHO05D004188 5.3e-10 68.6 133 33.1
CARHR045130 Cardamine hirsuta HOM05D003624 ORTHO05D004188 6.9e-10 68.2 148 31.8
ClCG05G013440 Citrullus lanatus HOM05D003624 ORTHO05D004188 6.9e-10 68.2 143 33.6
ECA247G0176 Erigeron canadensis HOM05D003624 ORTHO05D004188 9.0e-10 67.8 154 31.2
Eucgr.C04375 Eucalyptus grandis HOM05D003624 ORTHO05D004188 9.0e-10 67.8 172 31.4
Thhalv10011527m.g Eutrema salsugineum HOM05D003624 ORTHO05D004188 1.2e-09 67.4 163 32.5
ClCG01G013570 Citrullus lanatus HOM05D003624 ORTHO05D004188 1.5e-09 67.0 162 31.5
Duzib106G0342 Durio zibethinus HOM05D003624 ORTHO05D004188 1.5e-09 67.0 137 30.7
ECA232G3640 Erigeron canadensis HOM05D003624 ORTHO05D004188 1.5e-09 67.0 154 30.5
Lsat_1_v5_gn_3_22041 Lactuca sativa HOM05D003624 ORTHO05D004188 1.5e-09 67.0 154 31.2
PGR142G3002 Punica granatum HOM05D003624 ORTHO05D004188 1.5e-09 67.0 138 31.9
Cc07_g19190 Coffea canephora HOM05D003624 ORTHO05D004188 2.0e-09 66.6 133 30.8
Gohir.D10G228000 Gossypium hirsutum HOM05D003624 ORTHO05D004188 2.0e-09 66.6 137 30.7
Gorai.011G260400 Gossypium raimondii HOM05D003624 ORTHO05D004188 2.0e-09 66.6 137 30.7
PGSC0003DMG400023427 Solanum tuberosum HOM05D003624 ORTHO05D004188 2.0e-09 66.6 133 31.6
Os03g0570300 Oryza sativa ssp. japonica HOM05D003624 ORTHO05D004188 2.6e-09 66.2 133 32.3
Prupe.4G141300 Prunus persica HOM05D003624 ORTHO05D004188 2.6e-09 66.2 131 32.1
BcaB04g16957 Brassica carinata HOM05D003624 ORTHO05D004188 3.4e-09 65.9 130 32.3
AagrBONN_evm.TU.Sc2ySwM_368.2590 Anthoceros agrestis HOM05D003624 ORTHO05D004188 4.5e-09 65.5 154 31.2
MCO11G291 Micromonas commoda HOM05D003624 ORTHO05D004188 4.5e-09 65.5 138 36.2
Sc10g0001520 Simmondsia chinensis HOM05D003624 ORTHO05D004188 4.5e-09 65.5 133 30.1
AUR62031721 Chenopodium quinoa HOM05D003624 ORTHO05D004188 5.8e-09 65.1 133 30.8
Cc04_g09670 Coffea canephora HOM05D003624 ORTHO05D004188 5.8e-09 65.1 133 30.1
Sed0019448 Sechium edule HOM05D003624 ORTHO05D004188 5.8e-09 65.1 143 30.8
Ah.16g102270 Amaranthus hybridus HOM05D003624 ORTHO05D004188 7.6e-09 64.7 155 31.0
Gohir.A10G218400 Gossypium hirsutum HOM05D003624 ORTHO05D004188 7.6e-09 64.7 137 29.9
Pp3c24_1610 Physcomitrium patens HOM05D003624 ORTHO05D004188 7.6e-09 64.7 145 32.4
CSS0014624 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 1.3e-08 63.9 121 30.6
Haze_15559 Corylus avellana HOM05D003624 ORTHO05D004188 1.3e-08 63.9 130 31.5
Nitab4.5_0001992g0010 Nicotiana tabacum HOM05D003624 ORTHO05D004188 1.3e-08 63.9 133 31.6
Duzib114G1042 Durio zibethinus HOM05D003624 ORTHO05D004188 1.7e-08 63.5 155 29.0
Prupe.6G266400 Prunus persica HOM05D003624 ORTHO05D004188 1.7e-08 63.5 147 31.3
AUR62001070 Chenopodium quinoa HOM05D003624 ORTHO05D004188 2.2e-08 63.2 133 29.3
unitig_749.g13772 Utricularia gibba HOM05D003624 ORTHO05D004188 2.2e-08 63.2 153 32.0
Atru.chr4.2829 Acer truncatum HOM05D003624 ORTHO05D004188 2.9e-08 62.8 143 30.8
EL10Ac2g04634 Beta vulgaris HOM05D003624 ORTHO05D004188 2.9e-08 62.8 155 29.7
CBR_g36354 Chara braunii HOM05D003624 ORTHO05D004188 2.9e-08 62.8 133 35.3
TAR636G1411 Trochodendron aralioides HOM05D003624 ORTHO05D004188 2.9e-08 62.8 133 30.8
Prupe.1G588200 Prunus persica HOM05D003624 ORTHO05D004188 3.8e-08 62.4 137 29.9
Thecc.10G043100 Theobroma cacao HOM05D003624 ORTHO05D004188 3.8e-08 62.4 137 29.2
CiPaw.01G286800 Carya illinoinensis HOM05D003624 ORTHO05D004188 4.9e-08 62.0 133 30.1
Nitab4.5_0006489g0020 Nicotiana tabacum HOM05D003624 ORTHO05D004188 4.9e-08 62.0 133 31.6
Mapoly0087s0013 Marchantia polymorpha HOM05D003624 ORTHO05D004188 6.5e-08 61.6 152 31.6
Prupe.2G234600 Prunus persica HOM05D003624 ORTHO05D004188 6.5e-08 61.6 137 29.2
Peaxi162Scf00001g00045 Petunia axillaris HOM05D003624 ORTHO05D004188 8.4e-08 61.2 143 30.8
Peaxi162Scf00015g10126 Petunia axillaris HOM05D003624 ORTHO05D004188 8.4e-08 61.2 143 30.8
QL06p008449 Quercus lobata HOM05D003624 ORTHO05D004188 8.4e-08 61.2 130 30.0
QL09p007395 Quercus lobata HOM05D003624 ORTHO05D004188 8.4e-08 61.2 130 30.0
QL93p0214_0025 Quercus lobata HOM05D003624 ORTHO05D004188 8.4e-08 61.2 130 30.0
Migut.B01491 Erythranthe guttata HOM05D003624 ORTHO05D004188 1.1e-07 60.8 132 31.1
Nn6g34375 Nelumbo nucifera HOM05D003624 ORTHO05D004188 1.4e-07 60.5 136 28.7
AL1G63460 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 2.5e-07 59.7 131 29.0
Sabra08G0039900 Salix brachista HOM05D003624 ORTHO05D004188 2.5e-07 59.7 121 31.4
PSO384G3632 Papaver somniferum HOM05D003624 ORTHO05D004188 3.2e-07 59.3 133 29.3
Zm00001eb232160 Zea mays HOM05D003624 ORTHO05D004188 3.2e-07 59.3 134 29.9
CANSAT54G1653 Cannabis sativa HOM05D003624 ORTHO05D004188 7.1e-07 58.2 150 26.7
PSO339G0082 Papaver somniferum HOM05D003624 ORTHO05D004188 7.1e-07 58.2 133 28.6
Carub.0001s4395 Capsella rubella HOM05D003624 ORTHO05D004188 9.3e-07 57.8 159 28.3
CSS0018661 Camellia sinensis var. sinensis HOM05D003624 ORTHO05D004188 1.2e-06 57.4 133 29.3
AUR62032608 Chenopodium quinoa HOM05D003624 ORTHO05D004188 1.6e-06 57.0 133 28.6
HPP92_019187 Vanilla planifolia HOM05D003624 ORTHO05D004188 2.1e-06 56.6 131 27.5
AL185U10020 Arabidopsis lyrata HOM05D003624 ORTHO05D004188 2.7e-06 56.2 156 30.1
arahy.Tifrunner.gnm1.ann1.2R0TK7 Arachis hypogaea HOM05D003624 ORTHO05D004188 3.5e-06 55.8 119 27.7
TPR.G29126 Trifolium pratense HOM05D003624 ORTHO05D004188 3.5e-06 55.8 119 29.4
Manes.07G115700 Manihot esculenta HOM05D003624 ORTHO05D004188 4.6e-06 55.5 135 26.7
Rhsim03G0131100 Rhododendron simsii HOM05D003624 ORTHO05D004188 4.6e-06 55.5 134 25.4
Rhsim05G0154000 Rhododendron simsii HOM05D003624 ORTHO05D004188 4.6e-06 55.5 134 25.4
Atru.chr11.11 Acer truncatum HOM05D003624 ORTHO05D004188 6.0e-06 55.1 123 33.3
COL.COLO4_34579 Corchorus olitorius HOM05D003624 ORTHO05D004188 6.0e-06 55.1 139 26.6
Rhsim05G0153700 Rhododendron simsii HOM05D003624 ORTHO05D004188 6.0e-06 55.1 133 24.8
EL10Ac6g13458 Beta vulgaris HOM05D003624 ORTHO05D004188 7.9e-06 54.7 142 28.2
FAN10G3681 Fragaria x ananassa HOM05D003624 ORTHO05D004188 7.9e-06 54.7 128 30.5
vmacro17110 Vaccinium macrocarpon HOM05D003624 ORTHO05D004188 7.9e-06 54.7 134 26.1


User provided reference genes

Program Settings