Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G585 Micromonas commoda HOM05D006255 ORTHO05D008014 9.4e-87 323.9 223 100.0
Cre14.g629500 Chlamydomonas reinhardtii HOM05D006255 ORTHO05D008014 1.8e-16 90.5 159 40.9
Os04g0561600 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 3.0e-16 89.7 167 41.3
ATR0661G177 Amborella trichopoda HOM05D006255 ORTHO05D008014 5.1e-16 89.0 162 40.1
Sc08g0002620 Simmondsia chinensis HOM05D006255 ORTHO05D008014 5.1e-16 89.0 162 40.7
vmacro02304 Vaccinium macrocarpon HOM05D006255 ORTHO05D008014 8.7e-16 88.2 162 40.1
Medtr3g118350 Medicago truncatula HOM05D006255 ORTHO05D008014 1.1e-15 87.8 159 42.1
Sed0016506 Sechium edule HOM05D006255 ORTHO05D008014 1.5e-15 87.4 164 39.0
THA.LOC104804084 Tarenaya hassleriana HOM05D006255 ORTHO05D008014 1.5e-15 87.4 159 40.3
Ciclev10029213m.g Citrus clementina HOM05D006255 ORTHO05D008014 1.9e-15 87.0 159 40.9
Mapoly0058s0055 Marchantia polymorpha HOM05D006255 ORTHO05D008014 4.3e-15 85.9 126 42.1
Aqoxy5G01073 Aquilegia oxysepala HOM05D006255 ORTHO05D008014 5.6e-15 85.5 160 40.0
MBI05_g35101_MAGBIO Magnolia biondii HOM05D006255 ORTHO05D008014 5.6e-15 85.5 163 38.0
TAR625G0439 Trochodendron aralioides HOM05D006255 ORTHO05D008014 5.6e-15 85.5 160 38.1
Pp3c7_26990 Physcomitrium patens HOM05D006255 ORTHO05D008014 9.6e-15 84.7 167 38.9
Gohir.A12G035500 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.3e-14 84.3 158 39.9
Lj9A402T69 Lonicera japonica HOM05D006255 ORTHO05D008014 1.3e-14 84.3 162 38.3
Nn5g30887 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.6e-14 84.0 157 38.9
TWI31G0945 Tripterygium wilfordii HOM05D006255 ORTHO05D008014 1.6e-14 84.0 157 40.1
Zm00001eb074070 Zea mays HOM05D006255 ORTHO05D008014 1.6e-14 84.0 135 39.3
Prupe.8G172600 Prunus persica HOM05D006255 ORTHO05D008014 2.1e-14 83.6 159 40.3
PRCOL_00005063 Prasinoderma coloniale HOM05D006255 ORTHO05D008014 3.7e-14 82.8 167 41.3
MSTRG.16938 Avicennia marina HOM05D006255 ORTHO05D008014 6.2e-14 82.0 162 38.9
Eucgr.I01476 Eucalyptus grandis HOM05D006255 ORTHO05D008014 8.1e-14 81.6 160 38.8
SMO119G0083 Selaginella moellendorffii HOM05D006255 ORTHO05D008014 8.1e-14 81.6 164 36.6
Atru.chr5.3479 Acer truncatum HOM05D006255 ORTHO05D008014 1.1e-13 81.3 159 40.3
arahy.Tifrunner.gnm1.ann1.5E63QU Arachis hypogaea HOM05D006255 ORTHO05D008014 1.1e-13 81.3 158 38.6
AagrBONN_evm.TU.Sc2ySwM_368.1212 Anthoceros agrestis HOM05D006255 ORTHO05D008014 1.4e-13 80.9 133 38.3
Gohir.D01G162900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.4e-13 80.9 156 38.5
Gorai.002G202100 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.4e-13 80.9 156 38.5
Nn6g31846 Nelumbo nucifera HOM05D006255 ORTHO05D008014 1.4e-13 80.9 160 37.5
Potri.009G140200 Populus trichocarpa HOM05D006255 ORTHO05D008014 1.8e-13 80.5 155 39.4
FAN15G2553 Fragaria x ananassa HOM05D006255 ORTHO05D008014 4.0e-13 79.3 160 39.4
PGR142G2886 Punica granatum HOM05D006255 ORTHO05D008014 4.0e-13 79.3 162 38.3
Actinidia20544 Actinidia chinensis HOM05D006255 ORTHO05D008014 5.3e-13 79.0 159 37.7
Solyc01g111940.4 Solanum lycopersicum HOM05D006255 ORTHO05D008014 5.3e-13 79.0 162 39.5
Sopen01g053990 Solanum pennellii HOM05D006255 ORTHO05D008014 5.3e-13 79.0 162 40.7
HPP92_025891 Vanilla planifolia HOM05D006255 ORTHO05D008014 5.3e-13 79.0 166 38.6
arahy.Tifrunner.gnm1.ann1.K7U5ID Arachis hypogaea HOM05D006255 ORTHO05D008014 6.9e-13 78.6 157 37.6
CSS0039919 Camellia sinensis var. sinensis HOM05D006255 ORTHO05D008014 6.9e-13 78.6 162 37.0
CsaV3_7G001410 Cucumis sativus L. HOM05D006255 ORTHO05D008014 1.2e-12 77.8 160 38.8
Nitab4.5_0003603g0130 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.2e-12 77.8 160 39.4
Phvul.009G117000 Phaseolus vulgaris HOM05D006255 ORTHO05D008014 1.2e-12 77.8 126 39.7
BcaB03g14827 Brassica carinata HOM05D002002 ORTHO05D008711 1.5e-12 77.4 99 48.5
PGSC0003DMG401018633 Solanum tuberosum HOM05D006255 ORTHO05D008014 1.5e-12 77.4 161 40.4
Gohir.A01G171900 Gossypium hirsutum HOM05D006255 ORTHO05D008014 2.6e-12 76.6 152 39.5
Sed0013069 Sechium edule HOM05D006255 ORTHO05D008014 2.6e-12 76.6 164 37.2
Duzib248G1128 Durio zibethinus HOM05D006255 ORTHO05D008014 4.5e-12 75.9 156 37.2
Pp3c11_730 Physcomitrium patens HOM05D006255 ORTHO05D008014 5.8e-12 75.5 132 39.4
Pp3c11_731 Physcomitrium patens HOM05D006255 ORTHO05D008014 5.8e-12 75.5 132 39.4
SGA_v2.0_scaffold32G13327 Striga asiatica HOM05D006255 ORTHO05D008014 5.8e-12 75.5 156 37.2
Carub.0001s1596 Capsella rubella HOM05D006255 ORTHO05D008014 7.6e-12 75.1 162 37.7
Os03g0131800 Oryza sativa ssp. japonica HOM05D006255 ORTHO05D008014 7.6e-12 75.1 139 38.1
Actinidia18024 Actinidia chinensis HOM05D006255 ORTHO05D008014 1.0e-11 74.7 99 46.5
Ah.01g007960 Amaranthus hybridus HOM05D006255 ORTHO05D008014 1.0e-11 74.7 159 37.1
CDE02G2216 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 1.0e-11 74.7 129 41.1
CBR_g61263 Chara braunii HOM05D006255 ORTHO05D008014 1.0e-11 74.7 158 38.6
Gohir.D12G037200 Gossypium hirsutum HOM05D006255 ORTHO05D008014 1.0e-11 74.7 155 37.4
Manes.11G100600 Manihot esculenta HOM05D006255 ORTHO05D008014 1.0e-11 74.7 157 37.6
CARHR016680 Cardamine hirsuta HOM05D006255 ORTHO05D008014 1.3e-11 74.3 162 38.3
Nitab4.5_0001629g0040 Nicotiana tabacum HOM05D006255 ORTHO05D008014 1.3e-11 74.3 159 39.0
HPP92_022389 Vanilla planifolia HOM05D006255 ORTHO05D008014 1.3e-11 74.3 168 35.1
AL1G28330 Arabidopsis lyrata HOM05D006255 ORTHO05D008014 1.7e-11 73.9 162 37.7
AT1G16210 Arabidopsis thaliana HOM05D006255 ORTHO05D008014 1.7e-11 73.9 106 45.3
VMungo1309G1654 Vigna mungo HOM05D006255 ORTHO05D008014 1.7e-11 73.9 131 39.7
EL10Ac9g21307 Beta vulgaris HOM05D006255 ORTHO05D008014 2.9e-11 73.2 173 35.8
RcHm_v2.0_Chr6g0279491 Rosa chinensis HOM05D006255 ORTHO05D008014 2.9e-11 73.2 162 37.0
Thecc.02G052300 Theobroma cacao HOM05D006255 ORTHO05D008014 2.9e-11 73.2 153 37.3
Glyma.06G001200 Glycine max HOM05D006255 ORTHO05D008014 6.5e-11 72.0 97 44.3
Hma1.2p1_0163F.1_g072870 Hydrangea macrophylla HOM05D006255 ORTHO05D008014 6.5e-11 72.0 157 36.9
Duzib132G0230 Durio zibethinus HOM05D006255 ORTHO05D008014 8.4e-11 71.6 91 47.3
unitig_0.g812 Utricularia gibba HOM05D006255 ORTHO05D008014 8.4e-11 71.6 156 34.6
MSTRG.19958 Avicennia marina HOM05D006255 ORTHO05D008014 1.1e-10 71.2 157 34.4
ClCG02G003730 Citrullus lanatus HOM05D006255 ORTHO05D008014 1.4e-10 70.9 159 37.1
MELO3C013309.2 Cucumis melo HOM05D006255 ORTHO05D008014 1.9e-10 70.5 157 36.9
Gorai.008G038300 Gossypium raimondii HOM05D006255 ORTHO05D008014 1.9e-10 70.5 153 36.6
PSO675G3819 Papaver somniferum HOM05D006255 ORTHO05D008014 1.9e-10 70.5 159 36.5
A07p37050 Brassica napus HOM05D002002 ORTHO05D008711 2.5e-10 70.1 92 46.7
C06p44610 Brassica napus HOM05D002002 ORTHO05D008711 2.5e-10 70.1 92 46.7
BolC6t39525H Brassica oleracea HOM05D006255 ORTHO05D008014 2.5e-10 70.1 92 46.7
HanXRQChr16g0527781 Helianthus annuus HOM05D006255 ORTHO05D008014 2.5e-10 70.1 162 35.8
TPR.G38579 Trifolium pratense HOM05D006255 ORTHO05D008014 2.5e-10 70.1 163 36.8
BcaB03g14828 Brassica carinata HOM05D006255 ORTHO05D008014 3.2e-10 69.7 94 46.8
BraA07t31267Z Brassica rapa HOM05D006255 ORTHO05D008014 3.2e-10 69.7 92 46.7
Oeu029013.1 Olea europaea HOM05D006255 ORTHO05D008014 3.2e-10 69.7 126 38.9
Dinv14143 Davidia involucrata HOM05D006255 ORTHO05D008014 4.2e-10 69.3 92 46.7
Cfa005320 Carpinus fangiana HOM05D006255 ORTHO05D010524 5.5e-10 68.9 156 36.5
ECA233G3172 Erigeron canadensis HOM05D006255 ORTHO05D008014 5.5e-10 68.9 161 35.4
Lsat_1_v5_gn_8_122201 Lactuca sativa HOM05D006255 ORTHO05D008014 5.5e-10 68.9 164 34.8
Lj4g0004587 Lotus japonicus HOM05D006255 ORTHO05D008014 5.5e-10 68.9 157 37.6
FAN27G1328 Fragaria x ananassa HOM05D006255 ORTHO05D008014 7.1e-10 68.6 160 36.9
CiPaw.05G087400 Carya illinoinensis HOM05D006255 ORTHO05D008014 1.2e-09 67.8 93 45.2
Glyma.04G001700 Glycine max HOM05D006255 ORTHO05D008014 1.6e-09 67.4 90 44.4
CDE09G0466 Ceratophyllum demersum HOM05D006255 ORTHO05D008014 2.7e-09 66.6 96 44.8
Lj5C174T15 Lonicera japonica HOM05D006255 ORTHO05D008014 2.7e-09 66.6 50 62.0
SalBow1G8078 Salvia bowleyana HOM05D006255 ORTHO05D010524 2.7e-09 66.6 157 34.4
Cc09_g10450 Coffea canephora HOM05D006255 ORTHO05D008014 3.5e-09 66.2 159 35.2
FvH4_2g15950 Fragaria vesca HOM05D006255 ORTHO05D008014 3.5e-09 66.2 159 36.5
FAN24G2083 Fragaria x ananassa HOM05D006255 ORTHO05D008014 3.5e-09 66.2 159 36.5
Nitab4.5_0001506g0010 Nicotiana tabacum HOM05D006255 ORTHO05D008014 3.5e-09 66.2 159 37.1
Sp4g00050 Schrenkiella parvula HOM05D006255 ORTHO05D008014 3.5e-09 66.2 86 47.7
COL.COLO4_18000 Corchorus olitorius HOM05D006255 ORTHO05D008014 4.6e-09 65.9 157 36.3
Peaxi162Scf00362g00349 Petunia axillaris HOM05D006255 ORTHO05D008014 4.6e-09 65.9 157 36.9
Nitab4.5_0001215g0050 Nicotiana tabacum HOM05D006255 ORTHO05D008014 6.0e-09 65.5 160 36.9
CANSAT25G2216 Cannabis sativa HOM05D006255 ORTHO05D008014 7.9e-09 65.1 94 44.7
Ca_15278_v3 Cicer arietinum L. HOM05D006255 ORTHO05D008014 1.0e-08 64.7 89 43.8
QL11p053294 Quercus lobata HOM05D006255 ORTHO05D008014 1.3e-08 64.3 92 43.5
MD10G1131800 Malus domestica HOM05D006255 ORTHO05D008014 1.8e-08 63.9 159 35.2
PSO541G1652 Papaver somniferum HOM05D006255 ORTHO05D008014 1.8e-08 63.9 129 36.4
GSVIVG01023898001 Vitis vinifera HOM05D006255 ORTHO05D008014 2.3e-08 63.5 44 63.6
Psat5g000920 Pisum sativum HOM05D006255 ORTHO05D008014 5.1e-08 62.4 162 34.6
Cpa.g.sc20.136 Carica papaya HOM05D006255 ORTHO05D008014 6.7e-08 62.0 157 33.8
AUR62009986 Chenopodium quinoa HOM05D006255 ORTHO05D008014 8.7e-08 61.6 83 42.2
Migut.H01073 Erythranthe guttata HOM05D006255 ORTHO05D008014 1.5e-07 60.8 119 33.6
MD05G1128500 Malus domestica HOM05D006255 ORTHO05D008014 1.9e-07 60.5 159 34.0
Lalb_Chr08g0246771 Lupinus albus HOM05D006255 ORTHO05D008014 2.5e-07 60.1 160 33.1
Aa31LG7G15760 Aethionema arabicum HOM05D007460 ORTHO05D009396 3.3e-07 59.7 179 34.1
Peaxi162Scf00875g00037 Petunia axillaris HOM05D006255 ORTHO05D008014 2.1e-06 57.0 92 41.3
Aa31LG9G40 Aethionema arabicum HOM05D006255 ORTHO05D008014 3.7e-06 56.2 182 33.5
Sabra09G0108900 Salix brachista HOM05D006255 ORTHO05D008014 4.8e-06 55.8 177 30.5


User provided reference genes

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