Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G516 Micromonas commoda HOM05D004562 ORTHO05D005435 0.0e+00 2138.6 1209 100.0
CSS0019251 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 1.0e-22 113.6 385 30.1
Ah.14g085940 Amaranthus hybridus HOM05D004562 ORTHO05D005435 2.3e-22 112.5 404 28.2
Mapoly0118s0042 Marchantia polymorpha HOM05D004562 ORTHO05D005435 5.2e-22 111.3 392 30.9
Oeu026264.3 Olea europaea HOM05D004562 ORTHO05D005435 8.9e-22 110.5 384 29.7
SalBow1G2489 Salvia bowleyana HOM05D004562 ORTHO05D005435 8.9e-22 110.5 387 29.5
MSTRG.9309 Avicennia marina HOM05D004562 ORTHO05D005435 1.2e-21 110.2 386 31.1
Migut.D01318 Erythranthe guttata HOM05D004562 ORTHO05D005435 1.2e-21 110.2 384 29.7
Aa31LG8G4790 Aethionema arabicum HOM05D004562 ORTHO05D005435 1.5e-21 109.8 382 29.3
Gorai.008G290800 Gossypium raimondii HOM05D004562 ORTHO05D005435 1.5e-21 109.8 384 29.7
Sopen03g037570 Solanum pennellii HOM05D004562 ORTHO05D005435 1.5e-21 109.8 379 30.1
EL10Ac8g19501 Beta vulgaris HOM05D004562 ORTHO05D005435 2.6e-21 109.0 404 29.0
MBI13_g01852_MAGBIO Magnolia biondii HOM05D004562 ORTHO05D005435 2.6e-21 109.0 384 28.9
Solyc03g118620.3 Solanum lycopersicum HOM05D004562 ORTHO05D005435 2.6e-21 109.0 379 30.1
Carub.0003s1765 Capsella rubella HOM05D004562 ORTHO05D005435 3.4e-21 108.6 382 29.8
CARHR093250 Cardamine hirsuta HOM05D004562 ORTHO05D005435 3.4e-21 108.6 382 29.6
Cc04_g06100 Coffea canephora HOM05D004562 ORTHO05D005435 3.4e-21 108.6 384 29.9
Gohir.D12G270500 Gossypium hirsutum HOM05D004562 ORTHO05D005435 3.4e-21 108.6 384 29.7
Sc12g0007950 Simmondsia chinensis HOM05D004562 ORTHO05D005435 3.4e-21 108.6 384 28.6
Nitab4.5_0010397g0020 Nicotiana tabacum HOM05D004562 ORTHO05D005435 4.4e-21 108.2 380 30.5
THA.LOC104820345 Tarenaya hassleriana HOM05D004562 ORTHO05D005435 4.4e-21 108.2 381 29.4
Nn3g18314 Nelumbo nucifera HOM05D004562 ORTHO05D005435 5.8e-21 107.8 385 28.8
ECA238G1924 Erigeron canadensis HOM05D004562 ORTHO05D005435 7.5e-21 107.5 378 28.3
Peaxi162Scf00314g00332 Petunia axillaris HOM05D004562 ORTHO05D005435 7.5e-21 107.5 379 29.8
Pp3c10_10590 Physcomitrium patens HOM05D004562 ORTHO05D005435 7.5e-21 107.5 387 29.2
Gohir.A12G270000 Gossypium hirsutum HOM05D004562 ORTHO05D005435 9.8e-21 107.1 384 29.4
BcaB06g25854 Brassica carinata HOM05D004562 ORTHO05D005435 1.3e-20 106.7 382 29.8
CAN.G843.49 Capsicum annuum HOM05D004562 ORTHO05D005435 1.3e-20 106.7 379 29.8
COL.COLO4_28896 Corchorus olitorius HOM05D004562 ORTHO05D005435 1.3e-20 106.7 384 28.4
Thhalv10019973m.g Eutrema salsugineum HOM05D004562 ORTHO05D005435 1.7e-20 106.3 382 29.6
SGA_v2.0_scaffold172G39021 Striga asiatica HOM05D004562 ORTHO05D005435 2.2e-20 105.9 394 29.2
ATR0753G019 Amborella trichopoda HOM05D004562 ORTHO05D005435 2.9e-20 105.5 401 29.2
CANSAT80G2549 Cannabis sativa HOM05D004562 ORTHO05D005435 2.9e-20 105.5 368 30.2
PSO478G3379 Papaver somniferum HOM05D004562 ORTHO05D005435 2.9e-20 105.5 381 29.1
C05p48370 Brassica napus HOM05D004562 ORTHO05D005435 3.7e-20 105.1 382 29.6
FvH4_5g17490 Fragaria vesca HOM05D004562 ORTHO05D005435 3.7e-20 105.1 384 28.6
FAN18G3714 Fragaria x ananassa HOM05D004562 ORTHO05D005435 3.7e-20 105.1 384 28.6
PSO017G6436 Papaver somniferum HOM05D004562 ORTHO05D005435 3.7e-20 105.1 381 28.9
PGSC0003DMG400005676 Solanum tuberosum HOM05D004562 ORTHO05D005435 3.7e-20 105.1 379 29.6
BcaC05g28736 Brassica carinata HOM05D004562 ORTHO05D005435 4.9e-20 104.8 382 29.3
A05p31880 Brassica napus HOM05D004562 ORTHO05D005435 4.9e-20 104.8 382 29.3
BolC5t33574H Brassica oleracea HOM05D004562 ORTHO05D005435 4.9e-20 104.8 382 29.3
BraA05t22020Z Brassica rapa HOM05D004562 ORTHO05D005435 4.9e-20 104.8 382 29.3
AT3G17920 Arabidopsis thaliana HOM05D004562 ORTHO05D005435 6.4e-20 104.4 382 29.6
Nitab4.5_0001264g0030 Nicotiana tabacum HOM05D004562 ORTHO05D005435 6.4e-20 104.4 381 30.2
vmacro16407 Vaccinium macrocarpon HOM05D004562 ORTHO05D005435 6.4e-20 104.4 380 30.0
AUR62033795 Chenopodium quinoa HOM05D004562 ORTHO05D005435 8.3e-20 104.0 393 28.2
Ciclev10007290m.g Citrus clementina HOM05D004562 ORTHO05D005435 8.3e-20 104.0 385 29.4
CsaV3_1G004480 Cucumis sativus L. HOM05D004562 ORTHO05D005435 8.3e-20 104.0 385 28.3
FAN04G0449 Fragaria x ananassa HOM05D004562 ORTHO05D005435 8.3e-20 104.0 384 28.6
Sp3g16040 Schrenkiella parvula HOM05D004562 ORTHO05D005435 8.3e-20 104.0 382 29.3
Nn4g24285 Nelumbo nucifera HOM05D004562 ORTHO05D005435 1.1e-19 103.6 385 29.1
Cfa019638 Carpinus fangiana HOM05D004562 ORTHO05D005435 1.4e-19 103.2 385 29.6
AUR62029906 Chenopodium quinoa HOM05D004562 ORTHO05D005435 1.4e-19 103.2 393 28.5
MELO3C017375.2 Cucumis melo HOM05D004562 ORTHO05D005435 1.4e-19 103.2 385 28.3
Eucgr.K02277 Eucalyptus grandis HOM05D004562 ORTHO05D005435 1.4e-19 103.2 385 29.4
FAN08G1802 Fragaria x ananassa HOM05D004562 ORTHO05D005435 1.9e-19 102.8 384 28.6
QL10p030682 Quercus lobata HOM05D004562 ORTHO05D005435 1.9e-19 102.8 385 29.9
Sed0003970 Sechium edule HOM05D004562 ORTHO05D005435 1.9e-19 102.8 385 28.6
AL3G31090 Arabidopsis lyrata HOM05D004562 ORTHO05D005435 2.4e-19 102.4 391 29.2
arahy.Tifrunner.gnm1.ann1.G227WQ Arachis hypogaea HOM05D004562 ORTHO05D005435 3.2e-19 102.1 388 28.6
Dinv02642 Davidia involucrata HOM05D004562 ORTHO05D005435 3.2e-19 102.1 379 29.3
Carub.0001s3765 Capsella rubella HOM05D004562 ORTHO05D005435 4.1e-19 101.7 382 28.5
CiPaw.15G144500 Carya illinoinensis HOM05D004562 ORTHO05D005435 4.1e-19 101.7 411 29.9
FAN13G2245 Fragaria x ananassa HOM05D004562 ORTHO05D005435 4.1e-19 101.7 384 28.1
Rhsim12G0137700 Rhododendron simsii HOM05D004562 ORTHO05D005435 4.1e-19 101.7 412 29.1
TAR374G0462 Trochodendron aralioides HOM05D004562 ORTHO05D005435 4.1e-19 101.7 384 28.1
Lsat_1_v5_gn_2_14940 Lactuca sativa HOM05D004562 ORTHO05D005435 5.4e-19 101.3 383 28.7
Potri.012G045300 Populus trichocarpa HOM05D004562 ORTHO05D005435 5.4e-19 101.3 386 28.8
Sp1g35480 Schrenkiella parvula HOM05D004562 ORTHO05D005435 5.4e-19 101.3 382 28.8
Aqoxy3G00029 Aquilegia oxysepala HOM05D004562 ORTHO05D005435 7.0e-19 100.9 379 29.6
arahy.Tifrunner.gnm1.ann1.WQ60SD Arachis hypogaea HOM05D004562 ORTHO05D005435 7.0e-19 100.9 388 28.6
BcaC08g43044 Brassica carinata HOM05D004562 ORTHO05D005435 7.0e-19 100.9 382 28.0
C06p03060 Brassica napus HOM05D004562 ORTHO05D005435 7.0e-19 100.9 382 28.0
PGR044G1246 Punica granatum HOM05D004562 ORTHO05D005435 7.0e-19 100.9 381 29.4
A06p04420 Brassica napus HOM05D004562 ORTHO05D005435 9.2e-19 100.5 382 28.3
Lalb_Chr05g0221581 Lupinus albus HOM05D004562 ORTHO05D005435 9.2e-19 100.5 388 29.1
MD14G1237500 Malus domestica HOM05D004562 ORTHO05D005435 9.2e-19 100.5 404 29.2
BcaB07g33749 Brassica carinata HOM05D004562 ORTHO05D005435 1.2e-18 100.1 382 28.3
Haze_18884 Corylus avellana HOM05D004562 ORTHO05D005435 1.2e-18 100.1 377 30.0
Thhalv10011201m.g Eutrema salsugineum HOM05D004562 ORTHO05D005435 1.2e-18 100.1 381 28.6
BolC6t35426H Brassica oleracea HOM05D004562 ORTHO05D005435 1.6e-18 99.8 382 28.0
Potri.015G036300 Populus trichocarpa HOM05D004562 ORTHO05D005435 1.6e-18 99.8 385 29.1
Zm00001eb008950 Zea mays HOM05D004562 ORTHO05D005435 1.6e-18 99.8 372 27.7
Gohir.D02G121900 Gossypium hirsutum HOM05D004562 ORTHO05D005435 2.0e-18 99.4 384 28.6
Os03g0221800 Oryza sativa ssp. japonica HOM05D004562 ORTHO05D005435 2.7e-18 99.0 372 28.5
Hund22308 Selenicereus undatus HOM05D004562 ORTHO05D005435 2.7e-18 99.0 380 28.7
HPP92_016742 Vanilla planifolia HOM05D004562 ORTHO05D005435 2.7e-18 99.0 379 29.0
Sabra15G0029800 Salix brachista HOM05D004562 ORTHO05D005435 3.5e-18 98.6 385 28.1
Gorai.005G132200 Gossypium raimondii HOM05D004562 ORTHO05D005435 6.0e-18 97.8 384 28.6
AL1G55180 Arabidopsis lyrata HOM05D004562 ORTHO05D005435 7.8e-18 97.4 390 29.0
AT1G48540 Arabidopsis thaliana HOM05D004562 ORTHO05D005435 7.8e-18 97.4 390 29.0
HanXRQChr09g0268071 Helianthus annuus HOM05D004562 ORTHO05D005435 7.8e-18 97.4 375 28.0
MD06G1228300 Malus domestica HOM05D004562 ORTHO05D005435 7.8e-18 97.4 405 28.6
CiPaw.16G096100 Carya illinoinensis HOM05D004562 ORTHO05D005435 1.0e-17 97.1 384 28.1
Lalb_Chr09g0330331 Lupinus albus HOM05D004562 ORTHO05D005435 1.0e-17 97.1 388 28.6
Glyma.08G055400 Glycine max HOM05D004562 ORTHO05D005435 1.3e-17 96.7 387 27.6
Lj4g0011431 Lotus japonicus HOM05D004562 ORTHO05D005435 1.3e-17 96.7 390 28.5
Prupe.5G234800 Prunus persica HOM05D004562 ORTHO05D005435 1.3e-17 96.7 384 28.1
RcHm_v2.0_Chr7g0178201 Rosa chinensis HOM05D004562 ORTHO05D005435 1.3e-17 96.7 384 28.1
CARHR038150 Cardamine hirsuta HOM05D004562 ORTHO05D005435 1.7e-17 96.3 383 27.9
unitig_46.g18720 Utricularia gibba HOM05D004562 ORTHO05D005435 1.7e-17 96.3 384 28.6
Manes.06G004700 Manihot esculenta HOM05D004562 ORTHO05D005435 2.3e-17 95.9 386 28.8
Sed0022497 Sechium edule HOM05D004562 ORTHO05D005435 2.3e-17 95.9 385 28.6
GSVIVG01008458001 Vitis vinifera HOM05D004562 ORTHO05D005435 2.3e-17 95.9 306 30.1
Glyma.05G247000 Glycine max HOM05D004562 ORTHO05D005435 3.0e-17 95.5 388 27.8
HanXRQChr02g0032401 Helianthus annuus HOM05D004562 ORTHO05D005435 6.6e-17 94.4 386 28.0
Medtr8g107440 Medicago truncatula HOM05D004562 ORTHO05D005435 8.6e-17 94.0 388 28.1
TWI60G0891 Tripterygium wilfordii HOM05D004562 ORTHO05D005435 1.9e-16 92.8 384 27.6
Ca_17180_v3 Cicer arietinum L. HOM05D004562 ORTHO05D005435 2.5e-16 92.4 388 28.4
Phvul.002G331100 Phaseolus vulgaris HOM05D004562 ORTHO05D005435 9.5e-16 90.5 387 26.6
TPR.G1465 Trifolium pratense HOM05D004562 ORTHO05D005435 9.5e-16 90.5 365 29.0
Aa31LG10G5260 Aethionema arabicum HOM05D004562 ORTHO05D005435 1.2e-15 90.1 416 26.7
Psat7g001240 Pisum sativum HOM05D004562 ORTHO05D005435 1.2e-15 90.1 388 27.6
AagrBONN_evm.TU.Sc2ySwM_228.5527 Anthoceros agrestis HOM05D004562 ORTHO05D005435 4.7e-15 88.2 400 29.0
BraA06t23647Z Brassica rapa HOM05D004562 ORTHO05D005435 1.8e-14 86.3 407 28.0
ClCG06G014190 Citrullus lanatus HOM05D004562 ORTHO05D005435 8.9e-14 84.0 329 29.5
PRCOL_00002225 Prasinoderma coloniale HOM05D004562 ORTHO05D005435 2.6e-13 82.4 409 28.6
Cpa.g.sc3.379 Carica papaya HOM05D004562 ORTHO05D005435 5.8e-13 81.3 330 28.5
Actinidia18882 Actinidia chinensis HOM05D004562 ORTHO05D005435 7.5e-13 80.9 239 29.7
DCAR_011617 Daucus carota HOM05D004562 ORTHO05D005435 2.2e-12 79.3 404 27.0
Actinidia35140 Actinidia chinensis HOM05D004562 ORTHO05D005435 4.9e-12 78.2 384 26.8
CSS0009282 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 1.9e-11 76.3 327 29.1
CSS0039239 Camellia sinensis var. sinensis HOM05D004562 ORTHO05D005435 1.9e-11 76.3 327 29.1
Lj5A159T41 Lonicera japonica HOM05D004562 ORTHO05D005435 6.0e-10 71.2 364 27.5
CDE05G0309 Ceratophyllum demersum HOM05D004562 ORTHO05D005435 3.0e-09 68.9 286 27.3
CBR_g38780 Chara braunii HOM05D004562 ORTHO05D005435 3.1e-06 58.9 113 38.9


User provided reference genes

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