Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G507 Micromonas commoda HOM05D005911 ORTHO05D007565 5.9e-253 877.1 457 100.0
Pp3c15_14160 Physcomitrium patens HOM05D005911 ORTHO05D007565 2.1e-48 197.6 388 37.1
ATR0733G150 Amborella trichopoda HOM05D005911 ORTHO05D007565 2.5e-41 174.1 404 31.4
AagrBONN_evm.TU.Sc2ySwM_117.291 Anthoceros agrestis HOM05D005911 ORTHO05D007565 2.1e-40 171.0 338 41.4
SEGI_31956 Sequoiadendron giganteum HOM05D005911 ORTHO05D007565 2.7e-40 170.6 391 33.8
Mapoly0044s0080 Marchantia polymorpha HOM05D005911 ORTHO05D007565 8.8e-39 165.6 287 41.1
CiPaw.06G137300 Carya illinoinensis HOM05D005911 ORTHO05D007565 2.8e-37 160.6 435 33.6
ECA236G0345 Erigeron canadensis HOM05D005911 ORTHO05D007565 2.8e-37 160.6 398 32.4
MBI16_g17455_MAGBIO Magnolia biondii HOM05D005911 ORTHO05D007565 4.8e-37 159.8 395 32.4
MSTRG.20102 Avicennia marina HOM05D005911 ORTHO05D007565 6.3e-37 159.5 397 34.8
SalBow3G0191 Salvia bowleyana HOM05D005911 ORTHO05D007565 8.2e-37 159.1 391 35.5
DCAR_003638 Daucus carota HOM05D005911 ORTHO05D007565 1.1e-36 158.7 402 33.3
Migut.N01227 Erythranthe guttata HOM05D005911 ORTHO05D007565 7.0e-36 156.0 376 34.3
Rhsim05G0076000 Rhododendron simsii HOM05D005911 ORTHO05D007565 1.2e-35 155.2 374 34.0
CBR_g27891 Chara braunii HOM05D005911 ORTHO05D007565 2.0e-35 154.5 396 33.8
Manes.17G099400 Manihot esculenta HOM05D005911 ORTHO05D007565 2.0e-35 154.5 384 33.9
QL11p042848 Quercus lobata HOM05D005911 ORTHO05D007565 2.0e-35 154.5 397 33.5
MD10G1080400 Malus domestica HOM05D005911 ORTHO05D007565 4.5e-35 153.3 374 33.7
arahy.Tifrunner.gnm1.ann1.CA4G6V Arachis hypogaea HOM05D005911 ORTHO05D007565 7.7e-35 152.5 399 32.1
TAR628G1003 Trochodendron aralioides HOM05D005911 ORTHO05D007565 1.0e-34 152.1 396 33.1
Nn1g05068 Nelumbo nucifera HOM05D005911 ORTHO05D007565 1.3e-34 151.8 385 34.0
Cfa005027 Carpinus fangiana HOM05D005911 ORTHO05D007565 1.7e-34 151.4 395 32.9
Dinv42087 Davidia involucrata HOM05D005911 ORTHO05D007565 1.7e-34 151.4 373 33.5
Sed0023974 Sechium edule HOM05D005911 ORTHO05D007565 1.7e-34 151.4 375 33.3
Lalb_Chr16g0385211 Lupinus albus HOM05D005911 ORTHO05D007565 2.9e-34 150.6 398 31.2
PGR042G3082 Punica granatum HOM05D005911 ORTHO05D009502 2.9e-34 150.6 419 32.7
GSVIVG01024153001 Vitis vinifera HOM05D005911 ORTHO05D007565 2.9e-34 150.6 400 33.5
RcHm_v2.0_Chr6g0263461 Rosa chinensis HOM05D005911 ORTHO05D007565 5.0e-34 149.8 374 33.4
CSS0013374 Camellia sinensis var. sinensis HOM05D005911 ORTHO05D007565 6.5e-34 149.4 385 34.0
SGA_v2.0_scaffold44G16630 Striga asiatica HOM05D005911 ORTHO05D007565 8.5e-34 149.1 366 33.9
Glyma.20G019800 Glycine max HOM05D005911 ORTHO05D007565 1.5e-33 148.3 376 32.7
Atru.chr5.2957 Acer truncatum HOM05D005911 ORTHO05D007565 1.9e-33 147.9 385 34.8
FAN20G0571 Fragaria x ananassa HOM05D005911 ORTHO05D007565 1.9e-33 147.9 372 33.6
Medtr4g084100 Medicago truncatula HOM05D005911 ORTHO05D007565 3.2e-33 147.1 397 32.2
FvH4_2g08380 Fragaria vesca HOM05D005911 ORTHO05D007565 7.2e-33 146.0 374 32.9
FAN24G3462 Fragaria x ananassa HOM05D005911 ORTHO05D007565 7.2e-33 146.0 374 32.9
Phvul.007G233200 Phaseolus vulgaris HOM05D005911 ORTHO05D007565 1.2e-32 145.2 375 31.7
Prupe.8G101700 Prunus persica HOM05D005911 ORTHO05D007565 1.2e-32 145.2 366 33.3
Cc02_g17800 Coffea canephora HOM05D005911 ORTHO05D007565 1.6e-32 144.8 399 32.8
Lsat_1_v5_gn_7_89660 Lactuca sativa HOM05D005911 ORTHO05D007565 1.6e-32 144.8 367 31.6
Lj4g0018405 Lotus japonicus HOM05D005911 ORTHO05D007565 1.6e-32 144.8 395 32.2
CAN.G322.116 Capsicum annuum HOM05D005911 ORTHO05D007565 2.1e-32 144.4 394 32.7
CsaV3_7G023300 Cucumis sativus L. HOM05D005911 ORTHO05D007565 2.1e-32 144.4 381 32.5
Thecc.02G123100 Theobroma cacao HOM05D005911 ORTHO05D007565 2.7e-32 144.1 397 31.5
TPR.G20990 Trifolium pratense HOM05D005911 ORTHO05D007565 2.7e-32 144.1 399 31.6
Cpa.g.sc62.118 Carica papaya HOM05D005911 ORTHO05D007565 3.6e-32 143.7 392 32.4
HanXRQChr16g0504971 Helianthus annuus HOM05D005911 ORTHO05D007565 4.7e-32 143.3 377 32.1
ClCG02G005220 Citrullus lanatus HOM05D005911 ORTHO05D007565 8.0e-32 142.5 426 31.7
Potri.004G152100 Populus trichocarpa HOM05D005911 ORTHO05D007565 8.0e-32 142.5 441 30.6
Actinidia17824 Actinidia chinensis HOM05D005911 ORTHO05D007565 1.4e-31 141.7 372 33.3
Nitab4.5_0008989g0030 Nicotiana tabacum HOM05D005911 ORTHO05D007565 1.4e-31 141.7 372 33.9
Ca_18760_v3 Cicer arietinum L. HOM05D005911 ORTHO05D007565 4.0e-31 140.2 373 31.9
COL.COLO4_32449 Corchorus olitorius HOM05D005911 ORTHO05D007565 4.0e-31 140.2 371 32.9
Gorai.012G129800 Gossypium raimondii HOM05D005911 ORTHO05D007565 6.7e-31 139.4 374 31.8
Nitab4.5_0001794g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 6.7e-31 139.4 374 33.4
TWI31G0066 Tripterygium wilfordii HOM05D005911 ORTHO05D007565 6.7e-31 139.4 404 31.4
Gohir.D04G144200 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.2e-30 138.7 374 31.8
EL10Ac9g21750 Beta vulgaris HOM05D005911 ORTHO05D007565 1.5e-30 138.3 396 31.1
Hund00288 Selenicereus undatus HOM05D005911 ORTHO05D007565 2.6e-30 137.5 396 32.1
Sopen01g051640 Solanum pennellii HOM05D005911 ORTHO05D007565 4.4e-30 136.7 392 31.6
PGSC0003DMG400025190 Solanum tuberosum HOM05D005911 ORTHO05D007565 4.4e-30 136.7 373 32.4
AUR62011353 Chenopodium quinoa HOM05D005911 ORTHO05D007565 5.7e-30 136.3 374 32.6
Duzib248G0238 Durio zibethinus HOM05D005911 ORTHO05D007565 5.7e-30 136.3 374 31.0
Peaxi162Scf00016g00941 Petunia axillaris HOM05D005911 ORTHO05D007565 9.7e-30 135.6 381 31.5
Ciclev10029888m.g Citrus clementina HOM05D005911 ORTHO05D007565 1.3e-29 135.2 310 37.1
Cre17.g701100 Chlamydomonas reinhardtii HOM05D005911 ORTHO05D007565 1.7e-29 134.8 255 38.4
Solyc01g109450.3 Solanum lycopersicum HOM05D005911 ORTHO05D007565 1.7e-29 134.8 392 31.6
Aqoxy5G01675 Aquilegia oxysepala HOM05D005911 ORTHO05D007565 2.8e-29 134.0 386 32.1
Potri.004G151600 Populus trichocarpa HOM05D005911 ORTHO05D007565 3.7e-29 133.7 281 35.2
BraA05t20973Z Brassica rapa HOM05D005911 ORTHO05D007565 1.1e-28 132.1 370 34.3
AUR62016709 Chenopodium quinoa HOM05D005911 ORTHO05D007565 1.4e-28 131.7 397 31.0
Oeu014335.1 Olea europaea HOM05D005911 ORTHO05D007565 3.1e-28 130.6 369 33.1
Psat3g133040 Pisum sativum HOM05D005911 ORTHO05D007565 3.1e-28 130.6 338 32.0
BcaC05g27521 Brassica carinata HOM05D005911 ORTHO05D007565 5.3e-28 129.8 369 32.8
Sc14g0001790 Simmondsia chinensis HOM05D005911 ORTHO05D007565 7.0e-28 129.4 378 30.2
Sabra04G0100900 Salix brachista HOM05D005911 ORTHO05D007565 1.6e-27 128.3 407 30.2
BcaB02g11057 Brassica carinata HOM05D005911 ORTHO05D007565 2.0e-27 127.9 369 33.6
BolC5t32220H Brassica oleracea HOM05D005911 ORTHO05D007565 2.7e-27 127.5 369 32.8
FAN15G1485 Fragaria x ananassa HOM05D005911 ORTHO05D007565 2.7e-27 127.5 345 32.2
Os05g0185700 Oryza sativa ssp. japonica HOM05D005911 ORTHO05D007565 2.7e-27 127.5 434 28.3
Aa31LG10G4600 Aethionema arabicum HOM05D005713 ORTHO05D007751 3.5e-27 127.1 367 31.9
C05p34650 Brassica napus HOM05D005911 ORTHO05D007565 3.5e-27 127.1 369 32.5
BcaC05g27500 Brassica carinata HOM05D005911 ORTHO05D007565 5.9e-27 126.3 369 32.5
A05p20650 Brassica napus HOM05D005911 ORTHO05D007565 1.0e-26 125.6 370 33.2
Carub.0001s3853 Capsella rubella HOM05D005911 ORTHO05D007565 1.7e-26 124.8 367 32.2
VMungo0720G1659 Vigna mungo HOM05D005911 ORTHO05D007565 1.7e-26 124.8 405 28.4
CDE02G3889 Ceratophyllum demersum HOM05D005911 ORTHO05D007565 2.9e-26 124.0 213 36.6
FAN27G2671 Fragaria x ananassa HOM05D005911 ORTHO05D007565 5.0e-26 123.2 223 37.7
Nitab4.5_0000443g0010 Nicotiana tabacum HOM05D005911 ORTHO05D007565 6.5e-26 122.9 417 30.0
THA.LOC104804910 Tarenaya hassleriana HOM05D005911 ORTHO05D007565 1.9e-25 121.3 268 37.3
Thhalv10011559m.g Eutrema salsugineum HOM05D005911 ORTHO05D007565 2.5e-25 120.9 366 31.7
AT1G49350 Arabidopsis thaliana HOM05D005911 ORTHO05D007565 3.2e-25 120.6 370 32.2
PRCOL_00000481 Prasinoderma coloniale HOM05D005911 ORTHO05D007565 1.2e-24 118.6 358 34.1
AL1G56310 Arabidopsis lyrata HOM05D005911 ORTHO05D007565 2.7e-24 117.5 370 31.4
Sp1g36210 Schrenkiella parvula HOM05D005911 ORTHO05D007565 8.0e-24 115.9 370 31.1
MELO3C012560.2 Cucumis melo HOM05D005911 ORTHO05D007565 4.0e-23 113.6 401 30.2
vmacro19435 Vaccinium macrocarpon HOM05D005911 ORTHO05D007565 5.2e-23 113.2 370 30.5
Haze_02358 Corylus avellana HOM05D005911 ORTHO05D009502 3.4e-22 110.5 386 31.3
BolC5t32198H Brassica oleracea HOM05D005911 ORTHO05D007565 4.4e-22 110.2 391 30.9
Eucgr.G01900 Eucalyptus grandis HOM05D005911 ORTHO05D007565 4.4e-22 110.2 346 30.3
CAN.G149.23 Capsicum annuum HOM05D005911 ORTHO05D007565 9.8e-22 109.0 380 27.1
Eucgr.G00462 Eucalyptus grandis HOM05D005911 ORTHO05D007565 1.3e-21 108.6 346 30.1
Lj9A367G52 Lonicera japonica HOM05D005911 ORTHO05D007565 1.7e-21 108.2 307 31.3
Gohir.A04G104400 Gossypium hirsutum HOM05D005911 ORTHO05D007565 1.8e-20 104.8 337 31.5
Hma1.2p1_0066F.1_g036670 Hydrangea macrophylla HOM05D005911 ORTHO05D007565 7.0e-20 102.8 330 30.3
C05p34970 Brassica napus HOM05D005911 ORTHO05D007565 9.5e-17 92.4 309 30.4
unitig_22.g6840 Utricularia gibba HOM05D005911 ORTHO05D007565 1.0e-15 89.0 360 27.8
Sc14g0001910 Simmondsia chinensis HOM05D005911 ORTHO05D007565 2.3e-15 87.8 317 27.8
AL1G56510 Arabidopsis lyrata HOM05D003089 ORTHO05D003544 9.8e-14 82.4 279 32.3
CARHR039360 Cardamine hirsuta HOM05D005911 ORTHO05D007565 3.1e-12 77.4 264 29.9
AagrBONN_evm.TU.Sc2ySwM_228.5516 Anthoceros agrestis HOM05D005911 ORTHO05D007565 5.9e-11 73.2 132 37.9
Zm00001eb346550 Zea mays HOM05D005911 ORTHO05D007565 7.3e-09 66.2 197 29.4
SGA_v2.0_scaffold55G19804 Striga asiatica HOM05D005911 ORTHO05D007565 6.1e-08 63.2 205 31.2
arahy.Tifrunner.gnm1.ann1.IUSJ9T Arachis hypogaea HOM05D005911 ORTHO05D007565 8.0e-08 62.8 142 34.5


User provided reference genes

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