Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G470 Micromonas commoda HOM05D006137 ORTHO05D007697 3.5e-139 498.4 281 100.0
HanXRQChr04g0098961 Helianthus annuus HOM05D006137 ORTHO05D007697 2.4e-34 150.2 198 38.9
ECA233G6209 Erigeron canadensis HOM05D006137 ORTHO05D007697 3.1e-34 149.8 198 39.4
TWI15G1160 Tripterygium wilfordii HOM05D006137 ORTHO05D007697 4.0e-34 149.4 209 38.3
VMungo1215G0535 Vigna mungo HOM05D006137 ORTHO05D007697 5.2e-34 149.1 208 39.9
COL.COLO4_16947 Corchorus olitorius HOM05D006137 ORTHO05D007697 8.9e-34 148.3 196 39.8
Lalb_Chr09g0325501 Lupinus albus HOM05D006137 ORTHO05D007697 8.9e-34 148.3 201 39.3
Ciclev10001458m.g Citrus clementina HOM05D006137 ORTHO05D007697 4.4e-33 146.0 196 39.8
Dinv25255 Davidia involucrata HOM05D006137 ORTHO05D007697 4.4e-33 146.0 207 37.2
TPR.G19427 Trifolium pratense HOM05D006137 ORTHO05D007697 5.8e-33 145.6 207 38.6
CSS0021967 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.9e-33 144.8 205 36.6
CSS0050317 Camellia sinensis var. sinensis HOM05D006137 ORTHO05D007697 9.9e-33 144.8 205 36.6
Mapoly0006s0263 Marchantia polymorpha HOM05D006137 ORTHO05D007697 1.3e-32 144.4 203 38.9
Medtr5g029550 Medicago truncatula HOM05D006137 ORTHO05D007697 1.3e-32 144.4 201 39.3
Sed0022354 Sechium edule HOM05D006137 ORTHO05D007697 1.3e-32 144.4 194 39.7
arahy.Tifrunner.gnm1.ann1.3JZK2J Arachis hypogaea HOM05D006137 ORTHO05D007697 1.7e-32 144.1 201 39.8
arahy.Tifrunner.gnm1.ann1.J91B8N Arachis hypogaea HOM05D006137 ORTHO05D007697 1.7e-32 144.1 201 39.8
Sabra03G0065200 Salix brachista HOM05D006137 ORTHO05D007697 2.2e-32 143.7 200 37.5
MELO3C013825.2 Cucumis melo HOM05D006137 ORTHO05D007697 2.9e-32 143.3 209 36.8
Phvul.002G137400 Phaseolus vulgaris HOM05D006137 ORTHO05D007697 2.9e-32 143.3 201 38.8
Gohir.D12G208800 Gossypium hirsutum HOM05D006137 ORTHO05D007697 4.9e-32 142.5 210 37.1
CsaV3_3G001380 Cucumis sativus L. HOM05D006137 ORTHO05D007697 6.4e-32 142.1 206 36.4
Duzib068G1414 Durio zibethinus HOM05D006137 ORTHO05D007697 6.4e-32 142.1 194 39.2
Gorai.008G224300 Gossypium raimondii HOM05D006137 ORTHO05D007697 6.4e-32 142.1 210 36.7
CANSAT21G0809 Cannabis sativa HOM05D006137 ORTHO05D007697 8.4e-32 141.7 206 35.4
TAR629G2895 Trochodendron aralioides HOM05D006137 ORTHO05D007697 8.4e-32 141.7 196 38.3
GSVIVG01013108001 Vitis vinifera HOM05D006137 ORTHO05D007697 1.1e-31 141.4 198 37.4
Lj3g0008594 Lotus japonicus HOM05D006137 ORTHO05D007697 1.4e-31 141.0 203 38.9
CANSAT21G0548 Cannabis sativa HOM05D006137 ORTHO05D007697 1.9e-31 140.6 199 35.2
FvH4_2g06760 Fragaria vesca HOM05D006137 ORTHO05D007697 1.9e-31 140.6 195 36.9
Glyma.01G014900 Glycine max HOM05D006137 ORTHO05D007697 2.4e-31 140.2 201 38.8
Lsat_1_v5_gn_6_3681 Lactuca sativa HOM05D006137 ORTHO05D007697 2.4e-31 140.2 195 38.5
DCAR_008226 Daucus carota HOM05D006137 ORTHO05D007697 3.2e-31 139.8 205 37.6
MD06G1026400 Malus domestica HOM05D006137 ORTHO05D007697 4.1e-31 139.4 205 38.5
CAN.G726.20 Capsicum annuum HOM05D006137 ORTHO05D007697 5.4e-31 139.0 196 36.7
Hma1.2p1_1027F.1_g249480 Hydrangea macrophylla HOM05D006137 ORTHO05D007697 5.4e-31 139.0 207 35.7
CiPaw.11G098100 Carya illinoinensis HOM05D006137 ORTHO05D007697 7.1e-31 138.7 195 37.4
Psat2g138120 Pisum sativum HOM05D006137 ORTHO05D007697 7.1e-31 138.7 201 37.8
Thecc.03G309800 Theobroma cacao HOM05D006137 ORTHO05D007697 7.1e-31 138.7 196 38.8
Atru.chr6.1520 Acer truncatum HOM05D006137 ORTHO05D007697 9.2e-31 138.3 198 37.4
Gohir.A12G206400 Gossypium hirsutum HOM05D006137 ORTHO05D007697 9.2e-31 138.3 196 37.8
Aa31LG9G15490 Aethionema arabicum HOM05D006137 ORTHO05D007697 1.2e-30 137.9 194 36.6
PSO063G4597 Papaver somniferum HOM05D006137 ORTHO05D007697 1.2e-30 137.9 216 36.6
Potri.003G096600 Populus trichocarpa HOM05D006137 ORTHO05D007697 1.2e-30 137.9 200 37.0
CARHR129650 Cardamine hirsuta HOM05D006137 ORTHO05D007697 2.1e-30 137.1 206 36.9
RcHm_v2.0_Chr7g0211741 Rosa chinensis HOM05D006137 ORTHO05D007697 2.1e-30 137.1 196 37.2
EL10Ac2g03238 Beta vulgaris HOM05D006137 ORTHO05D007697 2.7e-30 136.7 196 38.3
PSO782G3150 Papaver somniferum HOM05D006137 ORTHO05D007697 2.7e-30 136.7 218 37.2
AT2G35500 Arabidopsis thaliana HOM05D006137 ORTHO05D007697 4.6e-30 136.0 198 34.8
A04p26930 Brassica napus HOM05D006137 ORTHO05D007697 4.6e-30 136.0 202 34.7
C04p64320 Brassica napus HOM05D006137 ORTHO05D007697 4.6e-30 136.0 202 34.7
BraA04t18192Z Brassica rapa HOM05D006137 ORTHO05D007697 4.6e-30 136.0 202 34.7
AL4G31550 Arabidopsis lyrata HOM05D006137 ORTHO05D007697 6.0e-30 135.6 203 34.0
Thhalv10016768m.g Eutrema salsugineum HOM05D006137 ORTHO05D007697 7.8e-30 135.2 203 34.0
FvH4_5g23010 Fragaria vesca HOM05D006137 ORTHO05D007697 1.3e-29 134.4 196 36.2
FAN18G2668 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.3e-29 134.4 196 36.2
Peaxi162Scf00170g00615 Petunia axillaris HOM05D006137 ORTHO05D007697 1.3e-29 134.4 196 37.2
BcaB06g28845 Brassica carinata HOM05D006137 ORTHO05D007697 1.7e-29 134.0 202 34.2
FAN08G1929 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.7e-29 134.0 196 36.2
SEGI_14560 Sequoiadendron giganteum HOM05D006137 ORTHO05D007697 2.3e-29 133.7 200 40.0
BcaC02g07708 Brassica carinata HOM05D006137 ORTHO05D007697 3.0e-29 133.3 202 34.2
BolC4t27919H Brassica oleracea HOM05D006137 ORTHO05D007697 3.0e-29 133.3 202 34.2
Carub.0004s1719 Capsella rubella HOM05D006137 ORTHO05D007697 3.0e-29 133.3 203 33.5
Sp4g17720 Schrenkiella parvula HOM05D006137 ORTHO05D007697 5.1e-29 132.5 193 34.7
FAN04G0555 Fragaria x ananassa HOM05D006137 ORTHO05D007697 6.6e-29 132.1 196 35.2
Nn3g19394 Nelumbo nucifera HOM05D006137 ORTHO05D007697 8.7e-29 131.7 210 34.3
Os10g0577700 Oryza sativa ssp. japonica HOM05D006137 ORTHO05D007697 8.7e-29 131.7 196 37.8
PGR042G0393 Punica granatum HOM05D006137 ORTHO05D007697 1.1e-28 131.3 198 35.4
AagrBONN_evm.TU.Sc2ySwM_344.1996 Anthoceros agrestis HOM05D006137 ORTHO05D007697 1.5e-28 131.0 200 35.5
MSTRG.24846 Avicennia marina HOM05D006137 ORTHO05D007697 1.5e-28 131.0 191 38.2
Nitab4.5_0002190g0020 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.5e-28 131.0 196 35.7
Rhsim11G0021000 Rhododendron simsii HOM05D006137 ORTHO05D007697 1.5e-28 131.0 217 34.1
Solyc08g076410.4 Solanum lycopersicum HOM05D006137 ORTHO05D007697 1.5e-28 131.0 196 35.2
Sopen08g024990 Solanum pennellii HOM05D006137 ORTHO05D007697 1.5e-28 131.0 196 35.2
PGSC0003DMG400014792 Solanum tuberosum HOM05D006137 ORTHO05D007697 1.5e-28 131.0 196 35.2
THA.LOC104814417 Tarenaya hassleriana HOM05D006137 ORTHO05D007697 2.5e-28 130.2 195 36.4
Oeu017078.1 Olea europaea HOM05D006137 ORTHO05D007697 1.6e-27 127.5 202 33.2
Aqoxy2G03876 Aquilegia oxysepala HOM05D006137 ORTHO05D007697 3.6e-27 126.3 196 35.2
Migut.A01172 Erythranthe guttata HOM05D006137 ORTHO05D007697 8.1e-27 125.2 194 35.1
ClCG10G001310 Citrullus lanatus HOM05D006137 ORTHO05D007697 1.1e-26 124.8 252 31.7
HPP92_014848 Vanilla planifolia HOM05D006137 ORTHO05D007697 5.2e-26 122.5 196 32.7
Pp3c12_17740 Physcomitrium patens HOM05D006137 ORTHO05D007697 6.9e-26 122.1 194 36.1
Cc08_g03270 Coffea canephora HOM05D006137 ORTHO05D007697 9.0e-26 121.7 191 35.6
unitig_748.g7545 Utricularia gibba HOM05D006137 ORTHO05D007697 9.0e-26 121.7 200 35.5
Zm00001eb025030 Zea mays HOM05D006137 ORTHO05D007697 1.5e-25 120.9 179 35.2
SMO228G0118 Selaginella moellendorffii HOM05D006137 ORTHO05D007697 2.6e-25 120.2 200 33.5
FAN13G2862 Fragaria x ananassa HOM05D006137 ORTHO05D007697 3.4e-25 119.8 213 32.4
Ah.09g233490 Amaranthus hybridus HOM05D006137 ORTHO05D007697 2.2e-24 117.1 195 35.9
Eucgr.E00233 Eucalyptus grandis HOM05D006137 ORTHO05D007697 2.9e-24 116.7 192 33.9
FAN18G2637 Fragaria x ananassa HOM05D006137 ORTHO05D007697 2.9e-24 116.7 231 30.7
CDE06G2536 Ceratophyllum demersum HOM05D006137 ORTHO05D007697 5.4e-23 112.5 226 32.3
FAN20G1935 Fragaria x ananassa HOM05D006137 ORTHO05D007697 7.1e-23 112.1 195 34.4
Nitab4.5_0003416g0030 Nicotiana tabacum HOM05D006137 ORTHO05D007697 1.3e-21 107.8 196 31.6
CBR_g18978 Chara braunii HOM05D006137 ORTHO05D007697 1.7e-21 107.5 178 36.0
Hund09822 Selenicereus undatus HOM05D006137 ORTHO05D007697 6.6e-21 105.5 173 32.9
vmacro08163 Vaccinium macrocarpon HOM05D006137 ORTHO05D007697 6.6e-21 105.5 190 34.2
AUR62002644 Chenopodium quinoa HOM05D006137 ORTHO05D007697 3.3e-20 103.2 143 37.1
PRCOL_00002339 Prasinoderma coloniale HOM05D006137 ORTHO05D007697 4.8e-19 99.4 207 32.9
FAN24G0436 Fragaria x ananassa HOM05D006137 ORTHO05D007697 1.8e-18 97.4 172 33.1
Oeu002327.1 Olea europaea HOM05D006137 ORTHO05D007697 1.8e-18 97.4 187 30.5
QL12p001513 Quercus lobata HOM05D006137 ORTHO05D007697 3.1e-18 96.7 172 33.7
SGA_v2.0_scaffold36G14297 Striga asiatica HOM05D006137 ORTHO05D007697 6.9e-18 95.5 140 40.7
Sc24g0002950 Simmondsia chinensis HOM05D006137 ORTHO05D007697 1.2e-17 94.7 173 35.8
ATR0829G218 Amborella trichopoda HOM05D006137 ORTHO05D007697 7.6e-17 92.0 174 35.6
Prupe.5G028300 Prunus persica HOM05D006137 ORTHO05D007697 9.9e-17 91.7 205 29.8
BolC3t20061H Brassica oleracea HOM05D006137 ORTHO05D007697 1.3e-16 91.3 204 29.9
BolC1t02019H Brassica oleracea HOM05D006137 ORTHO05D007697 6.4e-16 89.0 204 29.9
C01p20920 Brassica napus HOM05D006137 ORTHO05D007697 1.6e-14 84.3 204 29.4
C03p78000 Brassica napus HOM05D006137 ORTHO05D007697 6.0e-14 82.4 149 31.5
Cre16.g659850 Chlamydomonas reinhardtii HOM05D006137 ORTHO05D007697 5.6e-12 75.9 199 29.1
Oeu019613.1 Olea europaea HOM05D006137 ORTHO05D007697 7.4e-12 75.5 176 29.0
Oeu019614.1 Olea europaea HOM05D006137 ORTHO05D007697 7.4e-12 75.5 172 28.5
Haze_08142 Corylus avellana HOM05D006137 ORTHO05D007697 4.0e-10 69.7 83 42.2
Mapoly0089s0033 Marchantia polymorpha HOM05D002058 ORTHO05D003758 1.2e-09 68.2 121 34.7
AagrBONN_evm.TU.Sc2ySwM_117.1659 Anthoceros agrestis HOM05D002058 ORTHO05D003758 7.6e-09 65.5 121 36.4
Lj2A232T29 Lonicera japonica HOM05D006137 ORTHO05D007697 6.4e-08 62.4 231 26.4
SEGI_03566 Sequoiadendron giganteum HOM05D002058 ORTHO05D003758 4.2e-07 59.7 129 33.3
Eucgr.E00231 Eucalyptus grandis HOM05D006137 ORTHO05D007697 7.1e-07 58.9 171 25.7


User provided reference genes

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