Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G451 Micromonas commoda HOM05D006407 ORTHO05D008079 8.2e-225 783.5 420 100.0
Cre09.g393800 Chlamydomonas reinhardtii HOM05D006407 ORTHO05D008079 7.6e-21 105.9 321 32.1
Cfa010568 Carpinus fangiana HOM05D006407 ORTHO05D008079 1.3e-15 88.6 257 29.2
CANSAT01G1280 Cannabis sativa HOM05D006407 ORTHO05D008079 2.1e-15 87.8 260 29.6
Ca_12772_v3 Cicer arietinum L. HOM05D006407 ORTHO05D008079 2.1e-15 87.8 263 29.3
Dinv28811 Davidia involucrata HOM05D006407 ORTHO05D008079 2.1e-15 87.8 255 31.0
TWI36G1400 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 2.1e-15 87.8 255 29.0
Haze_03500 Corylus avellana HOM05D006407 ORTHO05D008079 2.8e-15 87.4 257 29.2
CiPaw.14G043600 Carya illinoinensis HOM05D006407 ORTHO05D008079 4.8e-15 86.7 255 29.8
Medtr1g007490 Medicago truncatula HOM05D006407 ORTHO05D008079 6.2e-15 86.3 262 28.2
TWI18G0256 Tripterygium wilfordii HOM05D006407 ORTHO05D008079 6.2e-15 86.3 255 29.8
Cpa.g.sc8.72 Carica papaya HOM05D006407 ORTHO05D008079 8.1e-15 85.9 260 30.4
GSVIVG01006226001 Vitis vinifera HOM05D006407 ORTHO05D008079 8.1e-15 85.9 260 27.7
Gohir.D07G167200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 1.1e-14 85.5 327 27.8
Gorai.N003300 Gossypium raimondii HOM05D006407 ORTHO05D008079 1.1e-14 85.5 327 27.8
Lj1g0005258 Lotus japonicus HOM05D006407 ORTHO05D008079 1.8e-14 84.7 263 28.1
QL09p046404 Quercus lobata HOM05D006407 ORTHO05D008079 2.4e-14 84.3 251 30.3
Glyma.16G083300 Glycine max HOM05D006407 ORTHO05D008079 3.1e-14 84.0 299 26.4
ATR0686G167 Amborella trichopoda HOM05D006407 ORTHO05D008079 4.0e-14 83.6 261 29.1
RcHm_v2.0_Chr6g0282821 Rosa chinensis HOM05D006407 ORTHO05D008079 4.0e-14 83.6 260 28.5
Thecc.01G211000 Theobroma cacao HOM05D006407 ORTHO05D008079 4.0e-14 83.6 260 28.5
CSS0030734 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.3e-14 83.2 255 29.8
CSS0036527 Camellia sinensis var. sinensis HOM05D006407 ORTHO05D008079 5.3e-14 83.2 255 29.8
Eucgr.H00725 Eucalyptus grandis HOM05D006407 ORTHO05D008079 5.3e-14 83.2 144 35.4
vmacro02816 Vaccinium macrocarpon HOM05D006407 ORTHO05D008079 5.3e-14 83.2 255 28.2
Potri.002G251400 Populus trichocarpa HOM05D006407 ORTHO05D008079 1.2e-13 82.0 260 28.1
HPP92_024258 Vanilla planifolia HOM05D006407 ORTHO05D008079 1.2e-13 82.0 298 26.2
ECA247G2281 Erigeron canadensis HOM05D006407 ORTHO05D008079 1.5e-13 81.6 254 29.1
Glyma.03G089700 Glycine max HOM05D006407 ORTHO05D008079 1.5e-13 81.6 294 27.6
Oeu057833.1 Olea europaea HOM05D006407 ORTHO05D008079 1.5e-13 81.6 256 29.7
MSTRG.18495 Avicennia marina HOM05D006407 ORTHO05D008079 2.0e-13 81.3 251 29.5
Gohir.A07G159200 Gossypium hirsutum HOM05D006407 ORTHO05D008079 2.0e-13 81.3 363 26.4
Lalb_Chr07g0194511 Lupinus albus HOM05D006407 ORTHO05D008079 2.0e-13 81.3 144 34.0
Rhsim13G0052700 Rhododendron simsii HOM05D006407 ORTHO05D008079 2.0e-13 81.3 260 28.8
Hund02795 Selenicereus undatus HOM05D006407 ORTHO05D008079 2.0e-13 81.3 260 26.2
ClCG09G008210 Citrullus lanatus HOM05D006407 ORTHO05D008079 2.6e-13 80.9 259 27.8
Sed0008140 Sechium edule HOM05D006407 ORTHO05D008079 2.6e-13 80.9 294 25.9
Aqoxy2G03962 Aquilegia oxysepala HOM05D006407 ORTHO05D008079 3.4e-13 80.5 260 27.7
FAN27G2095 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.4e-13 80.5 260 26.5
FAN27G3088 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.4e-13 80.5 260 26.5
Lj1C101T0 Lonicera japonica HOM05D006407 ORTHO05D008079 3.4e-13 80.5 251 29.5
Manes.12G054200 Manihot esculenta HOM05D006407 ORTHO05D008079 3.4e-13 80.5 260 28.8
Os11g0425300 Oryza sativa ssp. japonica HOM05D006407 ORTHO05D008079 3.4e-13 80.5 260 26.5
A09p04530 Brassica napus HOM05D006407 ORTHO05D008079 5.8e-13 79.7 260 27.7
BraA09t36088Z Brassica rapa HOM05D006407 ORTHO05D008079 5.8e-13 79.7 260 27.7
Carub.0008s0805 Capsella rubella HOM05D006407 ORTHO05D008079 5.8e-13 79.7 262 26.0
CARHR183610 Cardamine hirsuta HOM05D006407 ORTHO05D008079 5.8e-13 79.7 261 27.2
Sabra02G0191100 Salix brachista HOM05D006407 ORTHO05D008079 5.8e-13 79.7 261 28.0
TAR636G1997 Trochodendron aralioides HOM05D006407 ORTHO05D008079 5.8e-13 79.7 260 26.9
AL8G21320 Arabidopsis lyrata HOM05D006407 ORTHO05D008079 7.6e-13 79.3 261 26.8
AT5G48470 Arabidopsis thaliana HOM05D006407 ORTHO05D008079 7.6e-13 79.3 260 25.4
Phvul.008G108300 Phaseolus vulgaris HOM05D006407 ORTHO05D008079 1.3e-12 78.6 144 31.9
Psat6g036520 Pisum sativum HOM05D006407 ORTHO05D008079 1.3e-12 78.6 329 27.7
arahy.Tifrunner.gnm1.ann1.FHDW0K Arachis hypogaea HOM05D006407 ORTHO05D008079 1.7e-12 78.2 144 32.6
arahy.Tifrunner.gnm1.ann1.Q8L9VW Arachis hypogaea HOM05D006407 ORTHO05D008079 1.7e-12 78.2 144 32.6
Migut.D00736 Erythranthe guttata HOM05D006407 ORTHO05D008079 1.7e-12 78.2 329 24.3
HanXRQChr08g0231421 Helianthus annuus HOM05D006407 ORTHO05D008079 1.7e-12 78.2 140 35.0
THA.LOC104802645 Tarenaya hassleriana HOM05D006407 ORTHO05D008079 1.7e-12 78.2 260 26.5
BcaC04g23774 Brassica carinata HOM05D006407 ORTHO05D008079 2.2e-12 77.8 260 26.9
BolC9t53411H Brassica oleracea HOM05D006407 ORTHO05D008079 2.2e-12 77.8 260 26.9
Aa31sc527G10 Aethionema arabicum HOM05D006407 ORTHO05D008079 2.9e-12 77.4 260 26.5
C09p04840 Brassica napus HOM05D006407 ORTHO05D008079 2.9e-12 77.4 260 26.9
Ciclev10015489m.g Citrus clementina HOM05D006407 ORTHO05D008079 3.8e-12 77.0 260 26.2
FAN15G1719 Fragaria x ananassa HOM05D006407 ORTHO05D008079 3.8e-12 77.0 260 26.2
Hma1.2p1_0161F.1_g071410 Hydrangea macrophylla HOM05D006407 ORTHO05D008079 3.8e-12 77.0 144 33.3
Peaxi162Scf00335g00087 Petunia axillaris HOM05D006407 ORTHO05D008079 3.8e-12 77.0 251 28.7
Lsat_1_v5_gn_9_16300 Lactuca sativa HOM05D006407 ORTHO05D008079 4.9e-12 76.6 138 35.5
Zm00001eb169280 Zea mays HOM05D006407 ORTHO05D008079 4.9e-12 76.6 260 26.9
Atru.chr6.3545 Acer truncatum HOM05D006407 ORTHO05D008079 6.4e-12 76.3 144 32.6
FvH4_2g17800 Fragaria vesca HOM05D006407 ORTHO05D008079 6.4e-12 76.3 260 26.2
PGR083G0415 Punica granatum HOM05D006407 ORTHO05D008079 6.4e-12 76.3 258 28.3
Sc17g0001660 Simmondsia chinensis HOM05D006407 ORTHO05D008079 6.4e-12 76.3 255 25.9
Ah.11g051020 Amaranthus hybridus HOM05D006407 ORTHO05D008079 8.4e-12 75.9 324 26.2
BcaB04g19579 Brassica carinata HOM05D006407 ORTHO05D008079 8.4e-12 75.9 260 26.5
FAN24G2889 Fragaria x ananassa HOM05D006407 ORTHO05D008079 8.4e-12 75.9 260 26.2
SalBow6G2639 Salvia bowleyana HOM05D006407 ORTHO05D008079 8.4e-12 75.9 322 26.1
Sopen09g019480 Solanum pennellii HOM05D006407 ORTHO05D008079 8.4e-12 75.9 140 32.9
PGSC0003DMG400013943 Solanum tuberosum HOM05D006407 ORTHO05D008079 8.4e-12 75.9 140 33.6
Nitab4.5_0003859g0020 Nicotiana tabacum HOM05D001236 ORTHO05D001090 1.1e-11 75.5 334 25.4
Solyc09g056160.4 Solanum lycopersicum HOM05D006407 ORTHO05D008079 1.1e-11 75.5 256 27.3
MD10G1151900 Malus domestica HOM05D006407 ORTHO05D008079 1.9e-11 74.7 339 24.8
Actinidia30017 Actinidia chinensis HOM05D006407 ORTHO05D008079 2.5e-11 74.3 281 27.8
CsaV3_7G026830 Cucumis sativus L. HOM05D006407 ORTHO05D008079 2.5e-11 74.3 336 24.4
PSO675G1275 Papaver somniferum HOM05D006407 ORTHO05D008079 2.5e-11 74.3 338 24.3
EL10Ac5g10625 Beta vulgaris HOM05D006407 ORTHO05D008079 3.2e-11 73.9 339 26.3
Nitab4.5_0000038g0130 Nicotiana tabacum HOM05D006407 ORTHO05D008079 3.2e-11 73.9 351 25.9
Prupe.8G190300 Prunus persica HOM05D006407 ORTHO05D008079 3.2e-11 73.9 223 27.4
Sp2g18840 Schrenkiella parvula HOM05D006407 ORTHO05D008079 3.2e-11 73.9 265 26.8
SEGI_39839 Sequoiadendron giganteum HOM05D006407 ORTHO05D008079 3.2e-11 73.9 287 26.8
Thhalv10004357m.g Eutrema salsugineum HOM05D006407 ORTHO05D008079 5.5e-11 73.2 261 26.8
PSO017G7241 Papaver somniferum HOM05D006407 ORTHO05D008079 5.5e-11 73.2 337 24.0
Cc01_g16130 Coffea canephora HOM05D006407 ORTHO05D008079 7.1e-11 72.8 258 27.5
unitig_64.g29771 Utricularia gibba HOM05D006407 ORTHO05D008079 6.0e-10 69.7 248 27.8
COL.COLO4_26571 Corchorus olitorius HOM05D006407 ORTHO05D008079 3.0e-09 67.4 328 25.0
AUR62008121 Chenopodium quinoa HOM05D006407 ORTHO05D008079 3.9e-09 67.0 232 26.3
Mapoly0125s0038 Marchantia polymorpha HOM05D006407 ORTHO05D008079 3.9e-09 67.0 303 25.4
AagrBONN_evm.TU.Sc2ySwM_368.2294 Anthoceros agrestis HOM05D006407 ORTHO05D008079 3.7e-07 60.5 135 29.6
VMungo1383G2551 Vigna mungo HOM05D006407 ORTHO05D008079 4.8e-07 60.1 144 28.5
MBI11_g07407_MAGBIO Magnolia biondii HOM05D006407 ORTHO05D003073 1.1e-06 58.9 93 35.5
CDE09G0438 Ceratophyllum demersum HOM05D006407 ORTHO05D008079 2.4e-06 57.8 216 27.8
Nn1g08257 Nelumbo nucifera HOM05D006407 ORTHO05D008079 2.4e-06 57.8 196 25.0


User provided reference genes

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