Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G410 Micromonas commoda HOM05D016594 ORTHO05D018380 2.1e-306 1055.0 605 100.0
PRCOL_00006291 Prasinoderma coloniale HOM05D002023 ORTHO05D002049 5.0e-58 229.9 274 53.3
SMO334G0035 Selaginella moellendorffii HOM05D016594 ORTHO05D018380 1.3e-10 72.4 119 37.8
Cre09.g412000 Chlamydomonas reinhardtii HOM05D016594 ORTHO05D018380 3.0e-10 71.2 100 38.0
MCO09G296 Micromonas commoda HOM05D020353 ORTHO05D049203 6.7e-10 70.1 127 42.5
Hma1.2p1_0414F.1_g147600 Hydrangea macrophylla HOM05D001602 ORTHO05D001470 1.1e-09 69.3 134 35.1
MCO04G075 Micromonas commoda HOM05D016594 ORTHO05D018380 2.5e-09 68.2 99 40.4
Rhsim07G0121000 Rhododendron simsii HOM05D001602 ORTHO05D001470 4.3e-09 67.4 135 35.6
SMO364G0506 Selaginella moellendorffii HOM05D005677 ORTHO05D006966 5.6e-09 67.0 155 37.4
Lj2P248T46 Lonicera japonica HOM05D001602 ORTHO05D001470 1.3e-08 65.9 137 35.8
Cc08_g01690 Coffea canephora HOM05D001602 ORTHO05D001470 2.8e-08 64.7 134 35.1
Cfa012366 Carpinus fangiana HOM05D001602 ORTHO05D001470 3.7e-08 64.3 136 34.6
TWI81G0159 Tripterygium wilfordii HOM05D001602 ORTHO05D001470 8.1e-08 63.2 118 40.7
MCO14G472 Micromonas commoda HOM05D016594 ORTHO05D018380 1.1e-07 62.8 224 27.7
Haze_08317 Corylus avellana HOM05D001602 ORTHO05D001470 1.4e-07 62.4 136 33.1
Gohir.A08G160600 Gossypium hirsutum HOM05D001602 ORTHO05D001470 1.4e-07 62.4 115 38.3
Zm00001eb324730 Zea mays HOM05D005677 ORTHO05D006966 1.4e-07 62.4 165 38.2
CiPaw.11G086400 Carya illinoinensis HOM05D001602 ORTHO05D001470 1.8e-07 62.0 126 36.5
CDE11G1140 Ceratophyllum demersum HOM05D001602 ORTHO05D001470 3.1e-07 61.2 137 35.0
MD06G1042700 Malus domestica HOM05D001602 ORTHO05D001470 4.0e-07 60.8 135 35.6
MCO11G671 Micromonas commoda HOM05D005677 ORTHO05D006966 4.0e-07 60.8 123 39.0
Sp4g08660 Schrenkiella parvula HOM05D002956 ORTHO05D008031 5.3e-07 60.5 155 30.3
Gohir.D08G180900 Gossypium hirsutum HOM05D001602 ORTHO05D001470 9.0e-07 59.7 117 38.5
Gorai.004G189800 Gossypium raimondii HOM05D001602 ORTHO05D001470 9.0e-07 59.7 117 38.5
MCO15G679 Micromonas commoda HOM05D014140 ORTHO05D015854 9.0e-07 59.7 151 34.4
Thecc.03G235700 Theobroma cacao HOM05D001602 ORTHO05D001470 9.0e-07 59.7 118 35.6
Mapoly0059s0066 Marchantia polymorpha HOM05D001602 ORTHO05D001470 1.2e-06 59.3 161 34.8
PGR042G0660 Punica granatum HOM05D001602 ORTHO05D001470 1.2e-06 59.3 155 34.8
ClCG10G001950 Citrullus lanatus HOM05D001602 ORTHO05D001470 1.5e-06 58.9 135 32.6
COL.COLO4_17122 Corchorus olitorius HOM05D001602 ORTHO05D001470 2.0e-06 58.5 120 35.8
MELO3C013880.2 Cucumis melo HOM05D001602 ORTHO05D001470 2.0e-06 58.5 120 35.8
Duzib068G0907 Durio zibethinus HOM05D001602 ORTHO05D001470 2.0e-06 58.5 117 35.0
SalBow2G2154 Salvia bowleyana HOM05D001602 ORTHO05D001470 2.0e-06 58.5 210 32.9
PRCOL_00002246 Prasinoderma coloniale HOM05D016594 ORTHO05D018380 3.4e-06 57.8 264 25.4
FvH4_5g18590 Fragaria vesca HOM05D001602 ORTHO05D001470 4.5e-06 57.4 135 37.0
FAN18G2659 Fragaria x ananassa HOM05D000219 ORTHO05D000226 4.5e-06 57.4 135 37.0
RcHm_v2.0_Chr7g0176921 Rosa chinensis HOM05D001602 ORTHO05D001470 5.8e-06 57.0 135 36.3
SMO118G0160 Selaginella moellendorffii HOM05D001602 ORTHO05D001470 5.8e-06 57.0 192 29.2
SMO351G0211 Selaginella moellendorffii HOM05D001602 ORTHO05D001470 5.8e-06 57.0 173 31.2
THA.LOC104826460 Tarenaya hassleriana HOM05D002956 ORTHO05D008031 5.8e-06 57.0 156 29.5
Cre17.g747147 Chlamydomonas reinhardtii HOM05D001602 ORTHO05D001470 9.9e-06 56.2 150 36.0
FAN04G0471 Fragaria x ananassa HOM05D001602 ORTHO05D001470 9.9e-06 56.2 135 36.3
FAN13G1167 Fragaria x ananassa HOM05D001602 ORTHO05D001470 9.9e-06 56.2 135 37.0
MD06G1241200 Malus domestica HOM05D001602 ORTHO05D001470 9.9e-06 56.2 121 38.8
Nn1g00671 Nelumbo nucifera HOM05D001602 ORTHO05D001470 9.9e-06 56.2 139 36.0
Potri.001G148200 Populus trichocarpa HOM05D001602 ORTHO05D001470 9.9e-06 56.2 135 31.1
Zm00001eb295360 Zea mays HOM05D001602 ORTHO05D001470 9.9e-06 56.2 125 39.2


User provided reference genes

Program Settings