Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 7.8e-208 726.9 361 100.0
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 2.3e-90 336.7 322 54.0
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 1.3e-82 310.8 347 47.8
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 4.3e-81 305.8 354 47.2
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 7.3e-81 305.1 315 49.5
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 7.3e-81 305.1 318 49.7
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 9.6e-81 304.7 315 49.2
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 9.6e-81 304.7 315 48.6
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 1.3e-80 304.3 315 49.5
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 2.8e-80 303.1 314 48.7
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 2.8e-80 303.1 322 49.7
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 4.8e-80 302.4 334 48.5
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 4.8e-80 302.4 359 46.5
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.1e-79 301.2 316 50.6
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 4.0e-79 299.3 314 49.4
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 5.3e-79 298.9 369 44.4
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 6.9e-79 298.5 318 47.5
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.2e-78 297.7 334 47.3
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 1.2e-78 297.7 340 44.4
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.5e-78 297.4 359 45.7
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 3.4e-78 296.2 369 44.4
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 5.8e-78 295.4 317 49.5
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 7.6e-78 295.0 349 44.4
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 7.6e-78 295.0 344 45.1
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 9.9e-78 294.7 317 47.3
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.7e-77 293.9 360 43.6
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 2.9e-77 293.1 315 47.6
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 4.9e-77 292.4 370 44.1
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 6.4e-77 292.0 310 49.7
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 6.4e-77 292.0 314 48.7
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 6.4e-77 292.0 319 46.7
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 6.4e-77 292.0 352 44.6
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 8.4e-77 291.6 363 44.4
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 8.4e-77 291.6 370 43.8
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.4e-76 290.8 353 45.6
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 1.9e-76 290.4 319 46.4
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 1.9e-76 290.4 370 43.5
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.9e-76 290.4 318 45.9
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 2.4e-76 290.0 349 43.8
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 2.4e-76 290.0 355 45.6
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 2.4e-76 290.0 319 46.7
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 2.4e-76 290.0 329 47.1
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 3.2e-76 289.7 327 48.0
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 4.2e-76 289.3 318 48.1
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 5.4e-76 288.9 336 46.1
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 7.1e-76 288.5 315 47.3
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.6e-75 287.3 318 47.8
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 2.1e-75 287.0 317 45.1
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 4.6e-75 285.8 317 45.1
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 6.0e-75 285.4 345 45.5
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 1.8e-74 283.9 319 47.0
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.5e-73 280.8 314 44.3
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 7.4e-73 278.5 369 43.9
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 2.1e-72 276.9 278 50.4
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 6.2e-72 275.4 278 48.9
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 6.2e-72 275.4 311 46.0
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 5.3e-71 272.3 348 42.8
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 6.9e-71 271.9 348 41.4
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 9.0e-71 271.6 315 44.4
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 9.9e-70 268.1 366 40.7
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 4.9e-69 265.8 364 41.5
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 1.1e-65 254.6 258 47.7
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 1.5e-65 254.2 329 41.3
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.5e-65 253.4 364 42.3
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 5.6e-65 252.3 278 44.6
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.1e-64 250.4 325 40.3
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 2.4e-63 246.9 380 37.4
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.9e-61 239.2 261 46.7
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 3.2e-60 236.5 431 34.1
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 9.3e-60 235.0 358 41.1
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 1.0e-58 231.5 294 43.5
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 8.7e-58 228.4 305 43.6
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 7.4e-57 225.3 304 41.4
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 2.8e-56 223.4 318 37.4
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 3.7e-56 223.0 319 41.7
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 4.8e-56 222.6 322 40.7
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 1.2e-54 218.0 233 47.6
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 1.5e-49 201.1 393 33.3
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.2e-48 197.2 299 40.1
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 1.7e-45 187.6 314 36.3
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.7e-45 187.6 356 33.7
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 2.2e-45 187.2 317 37.5
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 6.5e-45 185.7 321 34.9
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 3.2e-44 183.3 278 39.2
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 3.2e-44 183.3 198 44.9
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.4e-44 181.8 289 37.7
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 2.7e-43 180.3 335 33.7
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 7.9e-43 178.7 315 34.9
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 1.4e-42 177.9 306 34.0
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 5.9e-38 162.5 334 34.4
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 5.9e-38 162.5 217 39.6
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 8.8e-34 148.7 220 40.9
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-33 147.9 220 41.4
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 6.3e-32 142.5 250 34.0
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 4.1e-31 139.8 206 37.9
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 4.1e-31 139.8 162 43.2
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.5e-30 136.3 172 44.8
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 4.5e-30 136.3 170 42.4
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 9.7e-25 118.6 172 35.5
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 6.3e-24 115.9 250 30.8
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 1.2e-22 111.7 92 54.3
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.5e-20 104.8 143 39.2
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 9.4e-20 102.1 196 32.1
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 5.2e-18 96.3 114 40.4
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 3.4e-17 93.6 120 41.7
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 4.4e-17 93.2 93 51.6
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 1.1e-15 88.6 137 35.0
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 1.0e-13 82.0 273 26.4
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 5.0e-13 79.7 238 28.2
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 1.5e-12 78.2 239 28.0
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 4.2e-12 76.6 103 40.8
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 9.5e-12 75.5 301 25.2
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 2.1e-11 74.3 144 36.8
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 1.5e-09 68.2 52 59.6
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 2.0e-09 67.8 84 40.5
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 7.5e-09 65.9 52 57.7
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 1.3e-08 65.1 266 23.7
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 8.3e-08 62.4 145 30.3
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 3.5e-06 57.0 198 25.8


User provided reference genes

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