Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G330 Micromonas commoda HOM05D007188 ORTHO05D009102 9.4e-119 430.3 225 100.0
Lsat_1_v5_gn_8_20860 Lactuca sativa HOM05D007188 ORTHO05D009102 2.9e-19 99.8 146 35.6
Cre10.g464650 Chlamydomonas reinhardtii HOM05D007188 ORTHO05D009102 1.1e-18 97.8 161 40.4
HanXRQChr08g0218401 Helianthus annuus HOM05D007188 ORTHO05D009102 1.1e-18 97.8 146 34.9
ECA233G0714 Erigeron canadensis HOM05D007188 ORTHO05D009102 9.4e-18 94.7 146 34.2
Cc02_g10880 Coffea canephora HOM05D007188 ORTHO05D009102 1.6e-17 94.0 143 33.6
CSS0035829 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.1e-17 93.6 140 33.6
CSS0007320 Camellia sinensis var. sinensis HOM05D007188 ORTHO05D009102 2.7e-17 93.2 140 33.6
Gohir.A05G293300 Gossypium hirsutum HOM05D007188 ORTHO05D009102 3.6e-17 92.8 145 32.4
AagrBONN_evm.TU.Sc2ySwM_228.639 Anthoceros agrestis HOM05D007188 ORTHO05D009102 6.1e-17 92.0 145 40.0
RcHm_v2.0_Chr1g0362491 Rosa chinensis HOM05D007188 ORTHO05D009102 6.1e-17 92.0 149 32.2
Eucgr.G02872 Eucalyptus grandis HOM05D007188 ORTHO05D009102 7.9e-17 91.7 184 32.1
FAN01G3175 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.0e-16 91.3 125 34.4
FAN03G0393 Fragaria x ananassa HOM05D007188 ORTHO05D009102 1.0e-16 91.3 137 34.3
Gorai.009G310600 Gossypium raimondii HOM05D007188 ORTHO05D009102 1.0e-16 91.3 145 32.4
PSO063G4012 Papaver somniferum HOM05D007188 ORTHO05D009102 1.0e-16 91.3 139 35.3
Gohir.D05G294000 Gossypium hirsutum HOM05D007188 ORTHO05D009102 1.4e-16 90.9 145 31.7
Potri.008G034900 Populus trichocarpa HOM05D007188 ORTHO05D009102 1.4e-16 90.9 138 32.6
Aqoxy1G01136 Aquilegia oxysepala HOM05D007188 ORTHO05D009102 1.8e-16 90.5 145 32.4
FAN06G0953 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.3e-16 90.1 163 32.5
FAN06G2123 Fragaria x ananassa HOM05D007188 ORTHO05D009102 2.3e-16 90.1 163 32.5
Pp3c2_18450 Physcomitrium patens HOM05D007188 ORTHO05D009102 2.3e-16 90.1 147 36.7
CiPaw.02G171800 Carya illinoinensis HOM05D007188 ORTHO05D009102 3.0e-16 89.7 146 31.5
FAN10G2630 Fragaria x ananassa HOM05D007188 ORTHO05D009102 3.0e-16 89.7 163 32.5
Migut.F01952 Erythranthe guttata HOM05D007188 ORTHO05D009102 3.9e-16 89.4 143 33.6
Sabra08G0023300 Salix brachista HOM05D007188 ORTHO05D009102 3.9e-16 89.4 138 32.6
AUR62014280 Chenopodium quinoa HOM05D007188 ORTHO05D009102 5.1e-16 89.0 148 30.4
MD01G1102700 Malus domestica HOM05D007188 ORTHO05D009102 5.1e-16 89.0 143 34.3
QL08p054189 Quercus lobata HOM05D007188 ORTHO05D009102 5.1e-16 89.0 143 32.9
TAR623G0008 Trochodendron aralioides HOM05D007188 ORTHO05D009102 6.7e-16 88.6 145 31.7
unitig_88.g27814 Utricularia gibba HOM05D007188 ORTHO05D009102 8.8e-16 88.2 146 33.6
arahy.Tifrunner.gnm1.ann1.3RW2WH Arachis hypogaea HOM05D007188 ORTHO05D009102 1.1e-15 87.8 139 33.1
arahy.Tifrunner.gnm1.ann1.CRM3NE Arachis hypogaea HOM05D007188 ORTHO05D009102 1.1e-15 87.8 139 33.1
Sc06g0002050 Simmondsia chinensis HOM05D007188 ORTHO05D009102 1.5e-15 87.4 144 31.2
CANSAT56G0643 Cannabis sativa HOM05D007188 ORTHO05D009102 2.0e-15 87.0 143 30.1
VMungo0720G2339 Vigna mungo HOM05D007188 ORTHO05D009102 2.6e-15 86.7 143 31.5
Aa31LG3G3010 Aethionema arabicum HOM05D007188 ORTHO05D009102 3.3e-15 86.3 138 33.3
CAN.G694.38 Capsicum annuum HOM05D007188 ORTHO05D009102 3.3e-15 86.3 169 29.0
Nn6g35269 Nelumbo nucifera HOM05D007188 ORTHO05D009102 3.3e-15 86.3 145 29.7
GSVIVG01016213001 Vitis vinifera HOM05D007188 ORTHO05D009102 4.4e-15 85.9 143 31.5
SGA_v2.0_scaffold62G21381 Striga asiatica HOM05D007188 ORTHO05D009102 5.7e-15 85.5 141 31.2
Thhalv10021497m.g Eutrema salsugineum HOM05D007188 ORTHO05D009102 7.4e-15 85.1 148 31.8
Sopen05g034000 Solanum pennellii HOM05D007188 ORTHO05D009102 7.4e-15 85.1 169 27.2
Ca_10538_v3 Cicer arietinum L. HOM05D007188 ORTHO05D009102 9.7e-15 84.7 139 32.4
RhsimUnG0185400 Rhododendron simsii HOM05D007188 ORTHO05D009102 9.7e-15 84.7 184 29.9
Solyc05g055550.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 9.7e-15 84.7 169 27.2
CsaV3_5G036040 Cucumis sativus L. HOM05D007188 ORTHO05D009102 1.7e-14 84.0 159 31.4
Glyma.20G183500 Glycine max HOM05D007188 ORTHO05D009102 1.7e-14 84.0 139 31.7
Nitab4.5_0001760g0020 Nicotiana tabacum HOM05D007188 ORTHO05D009102 1.7e-14 84.0 129 32.6
CARHR084890 Cardamine hirsuta HOM05D007188 ORTHO05D009102 2.2e-14 83.6 138 32.6
Sed0000210 Sechium edule HOM05D007188 ORTHO05D009102 2.2e-14 83.6 139 32.4
Os10g0545100 Oryza sativa ssp. japonica HOM05D007188 ORTHO05D009102 2.8e-14 83.2 184 30.4
Rhsim09G0148000 Rhododendron simsii HOM05D007188 ORTHO05D009102 2.8e-14 83.2 184 29.9
BolC3t16687H Brassica oleracea HOM05D007188 ORTHO05D009102 3.7e-14 82.8 146 28.8
SalBow4G2327 Salvia bowleyana HOM05D007188 ORTHO05D009102 3.7e-14 82.8 144 33.3
PGSC0003DMG400023370 Solanum tuberosum HOM05D007188 ORTHO05D009102 3.7e-14 82.8 146 29.5
AL3G21760 Arabidopsis lyrata HOM05D007188 ORTHO05D009102 4.8e-14 82.4 147 31.3
C03p44120 Brassica napus HOM05D007188 ORTHO05D009102 4.8e-14 82.4 146 28.8
BraA03t12819Z Brassica rapa HOM05D007188 ORTHO05D009102 4.8e-14 82.4 146 28.8
Peaxi162Scf00176g01519 Petunia axillaris HOM05D007188 ORTHO05D009102 4.8e-14 82.4 141 31.9
Phvul.007G099300 Phaseolus vulgaris HOM05D007188 ORTHO05D009102 4.8e-14 82.4 143 30.1
Sp3g08680 Schrenkiella parvula HOM05D007188 ORTHO05D009102 4.8e-14 82.4 148 31.1
A03p36520 Brassica napus HOM05D007188 ORTHO05D009102 6.3e-14 82.0 146 28.8
MELO3C012404.2 Cucumis melo HOM05D007188 ORTHO05D009102 6.3e-14 82.0 159 30.8
Manes.07G133140 Manihot esculenta HOM05D007188 ORTHO05D009102 6.3e-14 82.0 139 30.9
Psat6g181120 Pisum sativum HOM05D007188 ORTHO05D009102 6.3e-14 82.0 139 32.4
Zm00001eb022660 Zea mays HOM05D007188 ORTHO05D009102 8.2e-14 81.6 143 29.4
Lalb_Chr21g0313651 Lupinus albus HOM05D007188 ORTHO05D009102 1.4e-13 80.9 143 29.4
AT3G10405 Arabidopsis thaliana HOM05D007188 ORTHO05D009102 1.8e-13 80.5 138 31.2
CDE09G0470 Ceratophyllum demersum HOM05D007188 ORTHO05D009102 2.4e-13 80.1 163 27.0
Ah.06g188920 Amaranthus hybridus HOM05D006516 ORTHO05D008083 3.1e-13 79.7 153 29.4
Carub.0003s0959 Capsella rubella HOM05D007188 ORTHO05D009102 3.1e-13 79.7 147 30.6
TPR.G10293 Trifolium pratense HOM05D007188 ORTHO05D009102 3.1e-13 79.7 139 31.7
Solyc02g033060.3 Solanum lycopersicum HOM05D007188 ORTHO05D009102 4.1e-13 79.3 169 26.0
Sopen02g011440 Solanum pennellii HOM05D007188 ORTHO05D009102 4.1e-13 79.3 129 31.0
TWI38G2147 Tripterygium wilfordii HOM05D007188 ORTHO05D009102 4.1e-13 79.3 144 29.2
Cfa001805 Carpinus fangiana HOM05D007188 ORTHO05D009102 5.3e-13 79.0 157 28.7
Medtr1g094160 Medicago truncatula HOM05D007188 ORTHO05D009102 5.3e-13 79.0 154 31.2
Duzib106G0123 Durio zibethinus HOM05D007188 ORTHO05D009102 9.1e-13 78.2 196 28.1
Actinidia38870 Actinidia chinensis HOM05D007188 ORTHO05D009102 1.2e-12 77.8 198 27.8
Atru.chr12.855 Acer truncatum HOM05D007188 ORTHO05D009102 1.6e-12 77.4 178 30.3
Mapoly0050s0048 Marchantia polymorpha HOM05D007188 ORTHO05D009102 2.0e-12 77.0 213 31.5
Mapoly0278s0008 Marchantia polymorpha HOM05D007188 ORTHO05D009102 2.0e-12 77.0 213 31.5
Lj5g0026151 Lotus japonicus HOM05D007188 ORTHO05D009102 1.0e-11 74.7 144 30.6
ClCG05G021230 Citrullus lanatus HOM05D007188 ORTHO05D009102 3.8e-11 72.8 158 29.1
EL10Ac4g08743 Beta vulgaris HOM05D007188 ORTHO05D009102 8.5e-11 71.6 145 31.7
Glyma.10G207400 Glycine max HOM05D007188 ORTHO05D009102 7.2e-10 68.6 103 33.0
THA.LOC104826897 Tarenaya hassleriana HOM05D007188 ORTHO05D009102 2.1e-09 67.0 163 25.8
vmacro04839 Vaccinium macrocarpon HOM05D007188 ORTHO05D009102 3.6e-09 66.2 140 31.4
PRCOL_00002171 Prasinoderma coloniale HOM05D007188 ORTHO05D009102 6.1e-09 65.5 184 32.1
COL.COLO4_36178 Corchorus olitorius HOM05D007188 ORTHO05D009102 1.8e-08 63.9 208 27.4
Thecc.10G085100 Theobroma cacao HOM05D007188 ORTHO05D009102 6.7e-08 62.0 147 25.9
Ciclev10033195m.g Citrus clementina HOM05D007188 ORTHO05D009102 1.1e-07 61.2 89 33.7
Dinv31237 Davidia involucrata HOM05D007188 ORTHO05D009102 1.1e-07 61.2 105 29.5
BcaC01g04184 Brassica carinata HOM05D007188 ORTHO05D009102 2.6e-07 60.1 152 27.0
Haze_16743 Corylus avellana HOM05D007188 ORTHO05D009102 2.6e-07 60.1 157 26.8
Hund14950 Selenicereus undatus HOM05D007188 ORTHO05D009102 9.7e-07 58.2 106 28.3
SMO358G0267 Selaginella moellendorffii HOM05D007188 ORTHO05D009102 1.7e-06 57.4 142 28.2
Prupe.2G208300 Prunus persica HOM05D007188 ORTHO05D009102 6.3e-06 55.5 102 28.4


User provided reference genes

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