Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G221 Micromonas commoda HOM05D004969 ORTHO05D006085 9.2e-209 730.3 468 100.0
PSO170G6732 Papaver somniferum HOM05D004969 ORTHO05D006085 2.9e-29 134.0 185 40.5
Sc23g0001560 Simmondsia chinensis HOM05D004969 ORTHO05D006085 2.9e-29 134.0 150 44.0
PSO017G0293 Papaver somniferum HOM05D004969 ORTHO05D006085 1.1e-28 132.1 171 41.5
Hma1.2p1_0342F.1_g130660 Hydrangea macrophylla HOM05D004969 ORTHO05D006085 1.4e-28 131.7 149 42.3
VMungo0540G2242 Vigna mungo HOM05D004969 ORTHO05D006085 1.4e-28 131.7 148 42.6
Cpa.g.sc116.57 Carica papaya HOM05D004969 ORTHO05D006085 1.9e-28 131.3 148 42.6
HanXRQChr02g0036761 Helianthus annuus HOM05D004969 ORTHO05D006085 1.9e-28 131.3 191 38.2
Ca_15098_v3 Cicer arietinum L. HOM05D004969 ORTHO05D006085 2.5e-28 131.0 153 42.5
Eucgr.A02100 Eucalyptus grandis HOM05D004969 ORTHO05D006085 4.2e-28 130.2 188 36.7
MBI06_g36481_MAGBIO Magnolia biondii HOM05D004969 ORTHO05D006085 4.2e-28 130.2 149 43.0
Os04g0439900 Oryza sativa ssp. japonica HOM05D004969 ORTHO05D006085 4.2e-28 130.2 182 40.7
Phvul.006G083300 Phaseolus vulgaris HOM05D004969 ORTHO05D006085 5.5e-28 129.8 148 41.9
Prupe.2G102700 Prunus persica HOM05D004969 ORTHO05D006085 5.5e-28 129.8 149 42.3
Glyma.11G202700 Glycine max HOM05D004969 ORTHO05D006085 7.2e-28 129.4 148 41.9
Glyma.18G048200 Glycine max HOM05D004969 ORTHO05D006085 7.2e-28 129.4 148 41.9
Gorai.001G088300 Gossypium raimondii HOM05D004969 ORTHO05D006085 9.3e-28 129.0 185 38.4
TWI77G0063 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 9.3e-28 129.0 149 41.6
HPP92_004464 Vanilla planifolia HOM05D004969 ORTHO05D006085 9.3e-28 129.0 152 40.1
Mapoly0007s0079 Marchantia polymorpha HOM05D004969 ORTHO05D006085 1.2e-27 128.6 147 40.8
Medtr3g063200 Medicago truncatula HOM05D004969 ORTHO05D006085 1.2e-27 128.6 149 40.9
MSTRG.22462 Avicennia marina HOM05D004969 ORTHO05D006085 1.6e-27 128.3 149 40.9
COL.COLO4_05992 Corchorus olitorius HOM05D004598 ORTHO05D005550 1.6e-27 128.3 148 41.2
Duzib211G0057 Durio zibethinus HOM05D004969 ORTHO05D006085 1.6e-27 128.3 146 41.8
Gohir.A07G077900 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.6e-27 128.3 164 40.2
Gohir.D07G082700 Gossypium hirsutum HOM05D004969 ORTHO05D006085 1.6e-27 128.3 185 38.4
Manes.02G076800 Manihot esculenta HOM05D004969 ORTHO05D006085 1.6e-27 128.3 147 40.1
HPP92_004490 Vanilla planifolia HOM05D004969 ORTHO05D006085 1.6e-27 128.3 152 40.1
MD02G1235900 Malus domestica HOM05D004969 ORTHO05D006085 2.1e-27 127.9 162 38.9
CiPaw.06G151300 Carya illinoinensis HOM05D004969 ORTHO05D006085 2.7e-27 127.5 152 40.1
Nn5g27434 Nelumbo nucifera HOM05D004969 ORTHO05D006085 2.7e-27 127.5 149 40.9
THA.LOC104802933 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.7e-27 127.5 155 39.4
THA.LOC104827189 Tarenaya hassleriana HOM05D004969 ORTHO05D006085 2.7e-27 127.5 155 39.4
TAR381G0816 Trochodendron aralioides HOM05D004969 ORTHO05D006085 2.7e-27 127.5 149 40.9
Psat5g144880 Pisum sativum HOM05D004969 ORTHO05D006085 3.5e-27 127.1 199 37.2
Migut.N03359 Erythranthe guttata HOM05D004969 ORTHO05D006085 4.6e-27 126.7 149 40.9
CsaV3_5G020190 Cucumis sativus L. HOM05D004969 ORTHO05D006085 6.1e-27 126.3 147 39.5
Nitab4.5_0003818g0050 Nicotiana tabacum HOM05D004969 ORTHO05D006085 6.1e-27 126.3 150 40.0
GSVIVG01025999001 Vitis vinifera HOM05D004969 ORTHO05D006085 6.1e-27 126.3 202 35.6
AT5G16620 Arabidopsis thaliana HOM05D004969 ORTHO05D006085 7.9e-27 125.9 180 37.8
Carub.0006s1483 Capsella rubella HOM05D004969 ORTHO05D006085 7.9e-27 125.9 180 37.8
ECA247G1475 Erigeron canadensis HOM05D004969 ORTHO05D006085 7.9e-27 125.9 190 37.9
FvH4_7g07530 Fragaria vesca HOM05D004969 ORTHO05D006085 7.9e-27 125.9 173 36.4
FAN03G1223 Fragaria x ananassa HOM05D004969 ORTHO05D006085 7.9e-27 125.9 173 36.4
Thecc.04G114600 Theobroma cacao HOM05D004969 ORTHO05D006085 7.9e-27 125.9 181 37.0
TWI53G0342 Tripterygium wilfordii HOM05D004969 ORTHO05D006085 7.9e-27 125.9 151 40.4
Aa31LG11G13030 Aethionema arabicum HOM05D004969 ORTHO05D006085 1.0e-26 125.6 175 38.3
AL6G27590 Arabidopsis lyrata HOM05D004969 ORTHO05D006085 1.0e-26 125.6 180 37.8
BcaB08g36833 Brassica carinata HOM05D004969 ORTHO05D006085 1.0e-26 125.6 166 38.0
Sp6g27550 Schrenkiella parvula HOM05D004969 ORTHO05D006085 1.0e-26 125.6 168 38.7
PGSC0003DMG400023281 Solanum tuberosum HOM05D004969 ORTHO05D006085 1.0e-26 125.6 157 38.9
Actinidia23029 Actinidia chinensis HOM05D004969 ORTHO05D006085 1.3e-26 125.2 189 36.5
BraA02t05337Z Brassica rapa HOM05D004969 ORTHO05D006085 1.3e-26 125.2 170 37.6
Cc10_g11320 Coffea canephora HOM05D004969 ORTHO05D006085 1.3e-26 125.2 149 40.3
Lalb_Chr18g0053961 Lupinus albus HOM05D004969 ORTHO05D006085 1.3e-26 125.2 155 39.4
Nitab4.5_0000365g0150 Nicotiana tabacum HOM05D004969 ORTHO05D006085 1.3e-26 125.2 150 39.3
A10p22590 Brassica napus HOM05D004969 ORTHO05D006085 1.8e-26 124.8 170 37.6
BolC2t06766H Brassica oleracea HOM05D004969 ORTHO05D006085 1.8e-26 124.8 170 37.6
BraA10t44321Z Brassica rapa HOM05D004969 ORTHO05D006085 1.8e-26 124.8 170 37.6
Thhalv10013528m.g Eutrema salsugineum HOM05D004969 ORTHO05D006085 2.3e-26 124.4 172 38.4
Pp3c4_25740 Physcomitrium patens HOM05D004969 ORTHO05D006085 2.3e-26 124.4 355 30.4
Rhsim12G0005600 Rhododendron simsii HOM05D004969 ORTHO05D006085 2.3e-26 124.4 172 37.8
arahy.Tifrunner.gnm1.ann1.70N71I Arachis hypogaea HOM05D004969 ORTHO05D006085 3.0e-26 124.0 162 39.5
Cre12.g508000 Chlamydomonas reinhardtii HOM05D004969 ORTHO05D006085 3.0e-26 124.0 195 41.0
MD07G1079600 Malus domestica HOM05D004969 ORTHO05D006085 3.0e-26 124.0 173 38.7
Aqoxy2G02250 Aquilegia oxysepala HOM05D004969 ORTHO05D006085 3.9e-26 123.6 181 37.6
Duzib133G0278 Durio zibethinus HOM05D004969 ORTHO05D006085 5.1e-26 123.2 160 38.8
Lalb_Chr15g0085491 Lupinus albus HOM05D004969 ORTHO05D006085 1.5e-25 121.7 200 35.0
Potri.004G087100 Populus trichocarpa HOM05D004969 ORTHO05D006085 1.5e-25 121.7 287 32.1
RcHm_v2.0_Chr1g0339281 Rosa chinensis HOM05D004969 ORTHO05D006085 1.5e-25 121.7 173 37.6
CSS0003565 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.9e-25 121.3 347 33.4
CANSAT78G2392 Cannabis sativa HOM05D004969 ORTHO05D006085 2.5e-25 120.9 279 31.5
HanXRQChr04g0102091 Helianthus annuus HOM05D004969 ORTHO05D006085 2.5e-25 120.9 262 32.8
Sed0015915 Sechium edule HOM05D004969 ORTHO05D006085 2.5e-25 120.9 147 37.4
Cfa005580 Carpinus fangiana HOM05D004969 ORTHO05D006085 4.3e-25 120.2 154 39.0
Lj6g0017586 Lotus japonicus HOM05D004969 ORTHO05D006085 4.3e-25 120.2 258 31.8
Zm00001eb082230 Zea mays HOM05D004969 ORTHO05D006085 4.3e-25 120.2 353 31.7
Pp3c26_4000 Physcomitrium patens HOM05D004969 ORTHO05D006085 9.7e-25 119.0 255 31.0
CSS0028019 Camellia sinensis var. sinensis HOM05D004969 ORTHO05D006085 1.6e-24 118.2 347 33.1
Sabra04G0058000 Salix brachista HOM05D004969 ORTHO05D006085 1.6e-24 118.2 142 41.5
Sopen11g010590 Solanum pennellii HOM05D004969 ORTHO05D006085 1.6e-24 118.2 257 30.4
CAN.G2.7 Capsicum annuum HOM05D004969 ORTHO05D006085 2.2e-24 117.9 261 31.0
Solyc11g020300.2 Solanum lycopersicum HOM05D004969 ORTHO05D006085 2.2e-24 117.9 257 30.0
CARHR196580 Cardamine hirsuta HOM05D004969 ORTHO05D006085 2.8e-24 117.5 259 32.4
Ciclev10011792m.g Citrus clementina HOM05D004969 ORTHO05D006085 2.8e-24 117.5 164 36.0
PGR042G0690 Punica granatum HOM05D004969 ORTHO05D006085 2.8e-24 117.5 276 32.2
Peaxi162Scf00391g00434 Petunia axillaris HOM05D004969 ORTHO05D006085 6.3e-24 116.3 280 30.7
C09p60500 Brassica napus HOM05D004969 ORTHO05D006085 8.2e-24 115.9 170 35.9
Sabra17G0108000 Salix brachista HOM05D004969 ORTHO05D006085 2.4e-23 114.4 139 38.8
SMO367G0370 Selaginella moellendorffii HOM05D004969 ORTHO05D006085 2.4e-23 114.4 189 34.9
vmacro00973 Vaccinium macrocarpon HOM05D004969 ORTHO05D006085 2.4e-23 114.4 118 45.8
MELO3C025065.2 Cucumis melo HOM05D004969 ORTHO05D006085 4.1e-23 113.6 266 29.7
Potri.017G129800 Populus trichocarpa HOM05D004969 ORTHO05D006085 6.9e-23 112.8 179 34.6
ClCG01G008270 Citrullus lanatus HOM05D004969 ORTHO05D006085 1.5e-22 111.7 158 35.4
Hund27125 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.5e-22 111.7 79 59.5
Hund27130 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.5e-22 111.7 79 59.5
Gohir.A07G173560 Gossypium hirsutum HOM05D004969 ORTHO05D006085 2.0e-22 111.3 122 45.1
A02p03690 Brassica napus HOM05D006375 ORTHO05D008188 5.9e-22 109.8 161 35.4
Atru.chr1.1922 Acer truncatum HOM05D004969 ORTHO05D006085 2.2e-21 107.8 276 30.8
AagrBONN_evm.TU.Sc2ySwM_362.1764 Anthoceros agrestis HOM05D004969 ORTHO05D006085 2.9e-21 107.5 132 37.1
CDE04G1977 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 2.9e-21 107.5 371 28.6
BcaC03g18507 Brassica carinata HOM05D006375 ORTHO05D008188 3.8e-21 107.1 154 36.4
C02p08510 Brassica napus HOM05D006375 ORTHO05D008188 3.8e-21 107.1 154 36.4
AUR62023559 Chenopodium quinoa HOM05D004969 ORTHO05D006085 5.0e-21 106.7 186 37.1
SEGI_27085 Sequoiadendron giganteum HOM05D004969 ORTHO05D006085 5.0e-21 106.7 130 39.2
FAN06G2886 Fragaria x ananassa HOM05D004969 ORTHO05D006085 6.5e-21 106.3 170 34.7
FAN10G2597 Fragaria x ananassa HOM05D004969 ORTHO05D006085 8.5e-21 105.9 170 34.7
TPR.G14671 Trifolium pratense HOM05D004969 ORTHO05D006085 8.5e-21 105.9 83 53.0
CBR_g49427 Chara braunii HOM05D004969 ORTHO05D006085 1.4e-20 105.1 179 36.3
unitig_8.g3641 Utricularia gibba HOM05D004969 ORTHO05D006085 1.4e-20 105.1 260 30.4
ATR1136G165 Amborella trichopoda HOM05D004969 ORTHO05D006085 4.2e-20 103.6 187 34.2
MSTRG.1535 Avicennia marina HOM05D004969 ORTHO05D006085 4.2e-20 103.6 141 34.0
arahy.Tifrunner.gnm1.ann1.247CUK Arachis hypogaea HOM05D004969 ORTHO05D006085 7.2e-20 102.8 77 55.8
BolC9t58883H Brassica oleracea HOM05D004969 ORTHO05D006085 1.2e-19 102.1 360 30.3
HanXRQChr02g0036561 Helianthus annuus HOM05D004969 ORTHO05D006085 1.2e-19 102.1 184 31.5
DCAR_014392 Daucus carota HOM05D004969 ORTHO05D006085 4.6e-19 100.1 265 30.6
Hund16770 Selenicereus undatus HOM05D004969 ORTHO05D006085 4.6e-19 100.1 163 35.0
Lsat_1_v5_gn_1_25461 Lactuca sativa HOM05D004969 ORTHO05D006085 1.8e-18 98.2 150 36.0
SGA_v2.0_scaffold25G11066 Striga asiatica HOM05D004969 ORTHO05D007712 1.1e-17 95.5 249 30.1
Oeu064082.1 Olea europaea HOM05D004969 ORTHO05D006085 4.3e-17 93.6 193 31.6
QL11p019695 Quercus lobata HOM05D004969 ORTHO05D006085 1.3e-16 92.0 70 57.1
CDE07G1829 Ceratophyllum demersum HOM05D004969 ORTHO05D006085 6.3e-16 89.7 66 56.1
Zm00001eb422870 Zea mays HOM05D004969 ORTHO05D006085 1.4e-15 88.6 120 37.5
CiPaw.05G038800 Carya illinoinensis HOM05D004969 ORTHO05D006085 3.1e-15 87.4 274 28.1
Dinv41780 Davidia involucrata HOM05D004969 ORTHO05D006085 2.9e-13 80.9 156 32.7
FAN15G1524 Fragaria x ananassa HOM05D004969 ORTHO05D006085 1.4e-10 72.0 66 47.0
MELO3C025953.2 Cucumis melo HOM05D004969 ORTHO05D006085 1.7e-08 65.1 46 56.5
Hund14746 Selenicereus undatus HOM05D004969 ORTHO05D006085 1.7e-08 65.1 85 41.2
HanXRQChr02g0036751 Helianthus annuus HOM05D004969 ORTHO05D006085 2.8e-08 64.3 179 25.7
Oeu000537.1 Olea europaea HOM05D004969 ORTHO05D006085 2.6e-06 57.8 52 48.1


User provided reference genes

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