Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G207 Micromonas commoda HOM05D005746 ORTHO05D007105 0.0e+00 4722.5 2565 100.0
Mapoly0207s0007 Marchantia polymorpha HOM05D005746 ORTHO05D007105 6.0e-169 600.5 2551 27.8
Pp3c6_28730 Physcomitrium patens HOM05D005746 ORTHO05D007105 3.6e-166 591.3 2625 27.4
Medtr6g011760 Medicago truncatula HOM05D005746 ORTHO05D007105 3.9e-144 518.1 2461 25.7
Psat1g074560 Pisum sativum HOM05D005746 ORTHO05D007105 3.4e-140 505.0 2463 25.7
TPR.G10375 Trifolium pratense HOM05D005746 ORTHO05D007105 5.9e-140 504.2 2471 25.2
PGR083G2853 Punica granatum HOM05D005746 ORTHO05D007105 7.2e-138 497.3 2436 26.1
Nitab4.5_0002923g0020 Nicotiana tabacum HOM05D005746 ORTHO05D007105 9.3e-138 496.9 2478 25.9
Thhalv10003503m.g Eutrema salsugineum HOM05D005746 ORTHO05D007105 1.6e-137 496.1 2482 26.3
Dinv33748 Davidia involucrata HOM05D005746 ORTHO05D007105 3.6e-137 495.0 2550 25.5
vmacro05704 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 1.8e-136 492.7 2481 26.9
Peaxi162Scf00451g00821 Petunia axillaris HOM05D005746 ORTHO05D007105 8.7e-136 490.3 2474 26.0
THA.LOC104823176 Tarenaya hassleriana HOM05D005746 ORTHO05D007105 8.7e-136 490.3 2485 25.1
vmacro17103 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 8.7e-136 490.3 2476 26.7
Duzib147G0034 Durio zibethinus HOM05D005746 ORTHO05D007105 1.1e-135 490.0 2601 25.0
PSO017G1620 Papaver somniferum HOM05D005746 ORTHO05D007105 2.5e-135 488.8 2353 25.4
COL.COLO4_33291 Corchorus olitorius HOM05D005746 ORTHO05D007105 1.3e-134 486.5 2510 25.6
Sopen03g014980 Solanum pennellii HOM05D005746 ORTHO05D007105 4.8e-134 484.6 2369 25.8
Zm00001eb414960 Zea mays HOM05D005746 ORTHO05D007105 4.8e-134 484.6 2484 25.0
Solyc03g062650.3 Solanum lycopersicum HOM05D005746 ORTHO05D007105 8.2e-134 483.8 2366 26.1
Potri.004G128601 Populus trichocarpa HOM05D005746 ORTHO05D007105 1.4e-133 483.0 2478 25.9
Atru.chr8.140 Acer truncatum HOM05D005746 ORTHO05D007105 1.8e-133 482.6 2465 25.7
SEGI_38380 Sequoiadendron giganteum HOM05D005746 ORTHO05D007105 2.4e-133 482.3 2489 26.2
AUR62034394 Chenopodium quinoa HOM05D005746 ORTHO05D007105 1.2e-132 479.9 2497 25.7
Cfa007537 Carpinus fangiana HOM05D005746 ORTHO05D007105 1.5e-132 479.6 2393 25.8
AUR62039819 Chenopodium quinoa HOM05D005746 ORTHO05D007105 1.5e-132 479.6 2463 25.7
ClCG10G014980 Citrullus lanatus HOM05D005746 ORTHO05D007105 4.5e-132 478.0 2446 25.7
Nn4g23132 Nelumbo nucifera HOM05D005746 ORTHO05D007105 4.5e-132 478.0 2497 25.6
MBI05_g35450_MAGBIO Magnolia biondii HOM05D005746 ORTHO05D007105 5.9e-132 477.6 1775 27.9
AT3G55160 Arabidopsis thaliana HOM05D005746 ORTHO05D007105 7.7e-132 477.2 2491 25.7
Haze_14549 Corylus avellana HOM05D005746 ORTHO05D007105 7.7e-132 477.2 2379 26.0
A06p40280 Brassica napus HOM05D005746 ORTHO05D007105 1.0e-131 476.9 2522 25.8
BraA06t26946Z Brassica rapa HOM05D005746 ORTHO05D007105 1.0e-131 476.9 2522 25.8
SMO367G0809 Selaginella moellendorffii HOM05D005746 ORTHO05D007105 1.0e-131 476.9 2579 26.0
Lj2g0006836 Lotus japonicus HOM05D005746 ORTHO05D007105 6.5e-131 474.2 2607 25.4
Gohir.A09G017100 Gossypium hirsutum HOM05D005746 ORTHO05D007105 8.5e-131 473.8 2263 25.9
MD09G1049900 Malus domestica HOM05D005746 ORTHO05D007105 8.5e-131 473.8 2539 25.5
C07p37790 Brassica napus HOM05D005746 ORTHO05D007105 3.2e-130 471.9 2549 25.7
BolC7t44300H Brassica oleracea HOM05D005746 ORTHO05D007105 3.2e-130 471.9 2549 25.7
arahy.Tifrunner.gnm1.ann1.IK9RDG Arachis hypogaea HOM05D005746 ORTHO05D007105 5.5e-130 471.1 2487 25.7
Actinidia06086 Actinidia chinensis HOM05D005746 ORTHO05D007105 9.4e-130 470.3 2386 25.4
AL5G36280 Arabidopsis lyrata HOM05D005746 ORTHO05D007105 9.4e-130 470.3 2486 25.6
Glyma.19G021700 Glycine max HOM05D005746 ORTHO05D007105 9.4e-130 470.3 2153 26.8
Eucgr.J01361 Eucalyptus grandis HOM05D005746 ORTHO05D007105 2.1e-129 469.2 2455 25.7
RcHm_v2.0_Chr2g0168711 Rosa chinensis HOM05D005746 ORTHO05D007105 2.7e-129 468.8 2470 25.1
Ca_04277_v3 Cicer arietinum L. HOM05D005746 ORTHO05D007105 3.6e-129 468.4 2456 24.9
Rhsim10G0040100 Rhododendron simsii HOM05D005746 ORTHO05D007105 4.6e-129 468.0 2445 25.6
Migut.H00912 Erythranthe guttata HOM05D005746 ORTHO05D007105 6.1e-129 467.6 2578 25.4
Gorai.006G018000 Gossypium raimondii HOM05D005746 ORTHO05D007105 7.9e-129 467.2 2253 25.4
MD17G1050300 Malus domestica HOM05D005746 ORTHO05D007105 7.9e-129 467.2 2527 25.0
Lalb_Chr06g0175391 Lupinus albus HOM05D005746 ORTHO05D007105 1.0e-128 466.8 2169 26.0
arahy.Tifrunner.gnm1.ann1.C4FZ3V Arachis hypogaea HOM05D005746 ORTHO05D007105 2.3e-128 465.7 2488 25.8
MSTRG.3234 Avicennia marina HOM05D005746 ORTHO05D007105 2.3e-128 465.7 2469 24.9
CARHR165190 Cardamine hirsuta HOM05D005746 ORTHO05D007105 3.9e-128 464.9 2483 25.3
Hund15611 Selenicereus undatus HOM05D005746 ORTHO05D007105 3.9e-128 464.9 2488 25.5
MELO3C009878.2 Cucumis melo HOM05D005746 ORTHO05D007105 5.1e-128 464.5 2471 25.3
CiPaw.03G027900 Carya illinoinensis HOM05D005746 ORTHO05D007105 8.8e-128 463.8 2487 25.2
Sc14g0005950 Simmondsia chinensis HOM05D005746 ORTHO05D007105 1.1e-127 463.4 2481 25.5
Aa31LG2G4330 Aethionema arabicum HOM05D005746 ORTHO05D007105 2.0e-127 462.6 2498 25.0
DCAR_021658 Daucus carota HOM05D005746 ORTHO05D007105 2.6e-127 462.2 2526 25.1
Lsat_1_v5_gn_3_100801 Lactuca sativa HOM05D005746 ORTHO05D007105 2.6e-127 462.2 2419 25.1
TWI34G0228 Tripterygium wilfordii HOM05D005746 ORTHO05D007105 2.6e-127 462.2 2461 25.2
TAR374G0083 Trochodendron aralioides HOM05D005746 ORTHO05D007105 3.3e-127 461.8 2476 25.6
SGA_v2.0_scaffold1G00328 Striga asiatica HOM05D005746 ORTHO05D007105 4.4e-127 461.5 2351 26.2
Phvul.004G028000 Phaseolus vulgaris HOM05D005746 ORTHO05D007105 5.7e-127 461.1 2166 26.2
Sp2g17500 Schrenkiella parvula HOM05D005746 ORTHO05D007105 5.7e-127 461.1 2485 25.7
CSS0043134 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.3e-126 459.9 2374 25.3
CAN.G1205.1 Capsicum annuum HOM05D005746 ORTHO05D007105 1.3e-126 459.9 2495 25.6
Sabra04G0090500 Salix brachista HOM05D005746 ORTHO05D007105 2.8e-126 458.8 2474 24.9
Oeu060938.1 Olea europaea HOM05D005746 ORTHO05D007105 3.7e-126 458.4 2271 26.1
VMungo0464G0495 Vigna mungo HOM05D005746 ORTHO05D007105 3.7e-126 458.4 2166 26.2
Cc07_g03290 Coffea canephora HOM05D005746 ORTHO05D007105 1.1e-125 456.8 2552 25.5
EL10Ac2g02971 Beta vulgaris HOM05D005746 ORTHO05D007105 1.4e-125 456.4 2448 24.9
FvH4_6g48870 Fragaria vesca HOM05D005746 ORTHO05D007105 2.6e-124 452.2 2363 25.4
FAN02G0556 Fragaria x ananassa HOM05D005746 ORTHO05D007105 2.6e-124 452.2 2356 25.0
Aqoxy3G00678 Aquilegia oxysepala HOM05D005746 ORTHO05D007105 3.4e-124 451.8 2473 25.6
ATR0564G261 Amborella trichopoda HOM05D005746 ORTHO05D007105 5.9e-124 451.1 1808 26.7
Carub.0005s2180 Capsella rubella HOM05D005746 ORTHO05D007105 2.2e-123 449.1 1814 26.6
ECA246G0262 Erigeron canadensis HOM05D005746 ORTHO05D007105 2.2e-123 449.1 2442 24.2
CSS0009890 Camellia sinensis var. sinensis HOM05D005746 ORTHO05D007105 1.1e-122 446.8 2367 25.3
Sed0005323 Sechium edule HOM05D005746 ORTHO05D007105 1.9e-122 446.0 2443 24.9
QL02p081653 Quercus lobata HOM05D005746 ORTHO05D007105 3.2e-122 445.3 2466 24.7
BcaC06g33649 Brassica carinata HOM05D005746 ORTHO05D007105 4.2e-122 444.9 2352 25.9
HanXRQChr14g0439111 Helianthus annuus HOM05D005746 ORTHO05D007105 4.7e-121 441.4 2190 25.4
CBR_g50021 Chara braunii HOM05D005746 ORTHO05D007105 5.2e-120 438.0 2266 26.5
FAN09G1953 Fragaria x ananassa HOM05D005746 ORTHO05D007105 4.4e-119 434.9 2066 25.8
vmacro05746 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 4.4e-119 434.9 2471 26.1
Gohir.D09G015800 Gossypium hirsutum HOM05D005746 ORTHO05D007105 3.7e-118 431.8 1966 25.8
Thecc.04G080100 Theobroma cacao HOM05D005746 ORTHO05D007105 2.4e-117 429.1 2075 25.7
Manes.15G175000 Manihot esculenta HOM05D005746 ORTHO05D007105 2.6e-116 425.6 2064 25.0
HPP92_011243 Vanilla planifolia HOM05D005746 ORTHO05D007105 7.2e-114 417.5 2367 24.1
Prupe.3G268800 Prunus persica HOM05D005746 ORTHO05D007105 2.1e-113 416.0 1980 25.5
Cpa.g.sc14.10 Carica papaya HOM05D005746 ORTHO05D007105 5.2e-112 411.4 1639 26.6
Os08g0169700 Oryza sativa ssp. japonica HOM05D005746 ORTHO05D007105 6.3e-102 377.9 1594 26.0
Ciclev10010889m.g Citrus clementina HOM05D005746 ORTHO05D007105 6.8e-96 357.8 2470 23.7
GSVIVG01011388001 Vitis vinifera HOM05D005746 ORTHO05D007105 3.4e-87 328.9 1564 26.1
Lju41C18T12 Lonicera japonica HOM05D005746 ORTHO05D007105 1.2e-79 303.9 1507 25.0
VMungo0464G0208 Vigna mungo HOM05D005746 ORTHO05D007105 7.8e-76 291.2 1061 27.2
vmacro22549 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 3.3e-74 285.8 2623 23.0
AagrBONN_evm.TU.Sc2ySwM_369.379 Anthoceros agrestis HOM05D005746 ORTHO05D007105 5.2e-72 278.5 1495 27.4
CDE09G0909 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 7.6e-63 248.1 744 29.2
unitig_0.g531 Utricularia gibba HOM05D005746 ORTHO05D007105 4.6e-60 238.8 1325 25.7
CsaV3_3G041540 Cucumis sativus L. HOM05D005746 ORTHO05D007105 3.9e-59 235.7 1136 25.2
CsaV3_3G041530 Cucumis sativus L. HOM05D005746 ORTHO05D007105 1.2e-55 224.2 1214 26.2
Duzib147G0404 Durio zibethinus HOM05D005746 ORTHO05D007105 3.8e-54 219.2 1059 25.6
vmacro05484 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 6.9e-48 198.4 1176 25.7
CDE09G1403 Ceratophyllum demersum HOM05D005746 ORTHO05D007105 9.6e-34 151.4 854 25.2
Lju41A18T48 Lonicera japonica HOM05D005746 ORTHO05D007105 4.8e-33 149.1 526 28.9
Cre15.g642050 Chlamydomonas reinhardtii HOM05D005746 ORTHO05D007105 1.9e-26 127.1 286 33.9
BcaNung05131 Brassica carinata HOM05D005746 ORTHO05D007105 3.3e-26 126.3 901 24.1
CARHR159400 Cardamine hirsuta HOM05D005746 ORTHO05D007105 1.3e-25 124.4 352 29.0
vmacro05485 Vaccinium macrocarpon HOM05D005746 ORTHO05D007105 3.7e-17 96.3 147 38.8
AagrBONN_evm.TU.Sc2ySwM_369.378 Anthoceros agrestis HOM05D005746 ORTHO05D007105 1.4e-16 94.4 173 36.4
VMungo1127G1036 Vigna mungo HOM05D005746 ORTHO05D007105 8.5e-14 85.1 98 43.9
BcaC06g33650 Brassica carinata HOM05D005746 ORTHO05D007105 2.3e-11 77.0 96 47.9
CsaV3_UNG114880 Cucumis sativus L. HOM05D005746 ORTHO05D007105 3.0e-11 76.6 107 40.2
Lj2g0022018 Lotus japonicus HOM05D005746 ORTHO05D007105 1.5e-10 74.3 217 29.5
CAN.G284.10 Capsicum annuum HOM05D005746 ORTHO05D007105 9.7e-10 71.6 142 32.4
CAN.G525.35 Capsicum annuum HOM05D005746 ORTHO05D007105 3.7e-09 69.7 136 33.8
CAN.G691.2 Capsicum annuum HOM05D005746 ORTHO05D007105 6.3e-09 68.9 142 31.0
CAN.G65.185 Capsicum annuum HOM05D005746 ORTHO05D007105 7.0e-08 65.5 102 33.3
CAN.G697.12 Capsicum annuum HOM05D005746 ORTHO05D007105 1.2e-07 64.7 102 31.4
CAN.G385.2 Capsicum annuum HOM05D005746 ORTHO05D007105 1.0e-06 61.6 126 31.7
AagrBONN_evm.TU.Sc2ySwM_369.374 Anthoceros agrestis HOM05D005746 ORTHO05D007105 1.7e-06 60.8 94 38.3


User provided reference genes

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