Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G193 Micromonas commoda HOM05D000717 ORTHO05D044291 0.0e+00 1915.6 1132 100.0
Cre02.g115300 Chlamydomonas reinhardtii HOM05D000717 ORTHO05D044291 9.8e-39 166.8 352 33.2
Gohir.A02G123200 Gossypium hirsutum HOM05D000717 ORTHO05D000555 1.3e-11 76.6 335 26.9
FvH4_6g46080 Fragaria vesca HOM05D000717 ORTHO05D000555 2.3e-11 75.9 465 24.1
Gohir.D03G060602 Gossypium hirsutum HOM05D000717 ORTHO05D000555 1.1e-10 73.6 348 26.7
Gorai.002G056200 Gossypium raimondii HOM05D000717 ORTHO05D000555 1.5e-10 73.2 348 26.7
FAN14G4085 Fragaria x ananassa HOM05D000717 ORTHO05D000555 7.3e-10 70.9 465 23.4
Pp3c10_3550 Physcomitrium patens HOM05D000717 ORTHO05D000555 7.3e-10 70.9 445 26.1
BcaC08g45320 Brassica carinata HOM05D000717 ORTHO05D000555 2.1e-09 69.3 333 24.3
C06p29230 Brassica napus HOM05D000717 ORTHO05D000555 2.1e-09 69.3 333 24.3
Nn8g39651 Nelumbo nucifera HOM05D000717 ORTHO05D000555 2.1e-09 69.3 348 25.3
ClCG09G003120 Citrullus lanatus HOM05D000717 ORTHO05D000555 3.6e-09 68.6 345 24.6
FAN14G2371 Fragaria x ananassa HOM05D000717 ORTHO05D000555 4.7e-09 68.2 444 23.2
BolC6t40414H Brassica oleracea HOM05D000717 ORTHO05D000555 6.2e-09 67.8 332 24.4
BolC6t38088H Brassica oleracea HOM05D000717 ORTHO05D000555 8.1e-09 67.4 333 24.0
THA.LOC104812461 Tarenaya hassleriana HOM05D000717 ORTHO05D000555 8.1e-09 67.4 344 24.7
GSVIVG01017492001 Vitis vinifera HOM05D000717 ORTHO05D000555 8.1e-09 67.4 365 25.8
BraA07t30314Z Brassica rapa HOM05D000717 ORTHO05D000555 1.1e-08 67.0 333 24.0
A07p26710 Brassica napus HOM05D000717 ORTHO05D000555 1.4e-08 66.6 333 24.0
Nn2g12195 Nelumbo nucifera HOM05D000717 ORTHO05D000555 1.4e-08 66.6 341 24.3
HanXRQChr05g0156801 Helianthus annuus HOM05D000717 ORTHO05D000555 1.8e-08 66.2 453 23.4
PSO017G0709 Papaver somniferum HOM05D000717 ORTHO05D000555 1.8e-08 66.2 333 27.6
PSO478G0971 Papaver somniferum HOM05D000717 ORTHO05D000555 1.8e-08 66.2 333 27.6
TAR100G0003 Trochodendron aralioides HOM05D000717 ORTHO05D000555 1.8e-08 66.2 342 24.3
TAR170G0006 Trochodendron aralioides HOM05D000717 ORTHO05D000555 1.8e-08 66.2 342 24.3
Aa31LG2G3700 Aethionema arabicum HOM05D000717 ORTHO05D000555 2.3e-08 65.9 378 25.1
Aa31LG4G770 Aethionema arabicum HOM05D000717 ORTHO05D000555 2.3e-08 65.9 342 23.1
Cc07_g04660 Coffea canephora HOM05D000717 ORTHO05D000555 2.3e-08 65.9 337 27.3
Atru.chr2.3886 Acer truncatum HOM05D000717 ORTHO05D000555 3.1e-08 65.5 343 24.5
FvH4_6g29140 Fragaria vesca HOM05D000717 ORTHO05D000555 3.1e-08 65.5 386 24.1
Thhalv10018453m.g Eutrema salsugineum HOM05D000717 ORTHO05D000555 4.0e-08 65.1 341 23.8
FAN02G4269 Fragaria x ananassa HOM05D000717 ORTHO05D000555 4.0e-08 65.1 389 23.9
FAN05G0386 Fragaria x ananassa HOM05D000717 ORTHO05D000555 4.0e-08 65.1 443 22.6
Peaxi162Scf00019g00321 Petunia axillaris HOM05D000717 ORTHO05D000555 4.0e-08 65.1 337 26.4
Sed0008618 Sechium edule HOM05D000717 ORTHO05D000555 4.0e-08 65.1 336 22.9
MSTRG.2966 Avicennia marina HOM05D000717 ORTHO05D000555 5.2e-08 64.7 353 25.8
Cpa.g.sc10.137 Carica papaya HOM05D000717 ORTHO05D000555 5.2e-08 64.7 339 24.2
FAN05G0416 Fragaria x ananassa HOM05D000717 ORTHO05D000555 5.2e-08 64.7 389 23.7
FAN09G3718 Fragaria x ananassa HOM05D000717 ORTHO05D000555 5.2e-08 64.7 389 23.9
AT1G80510 Arabidopsis thaliana HOM05D000717 ORTHO05D000555 6.8e-08 64.3 330 23.9
FAN14G2309 Fragaria x ananassa HOM05D000717 ORTHO05D000555 6.8e-08 64.3 386 23.8
MD17G1217500 Malus domestica HOM05D000717 ORTHO05D000555 8.9e-08 63.9 336 24.4
Oeu032841.1 Olea europaea HOM05D000717 ORTHO05D000555 8.9e-08 63.9 463 24.6
PGR102G2592 Punica granatum HOM05D000717 ORTHO05D000555 8.9e-08 63.9 334 24.6
CiPaw.02G158800 Carya illinoinensis HOM05D000717 ORTHO05D000555 1.2e-07 63.5 340 22.6
COL.COLO4_00318 Corchorus olitorius HOM05D000717 ORTHO05D000555 1.2e-07 63.5 331 26.3
MSTRG.4697 Avicennia marina HOM05D000717 ORTHO05D000555 1.5e-07 63.2 340 23.8
BcaC03g15961 Brassica carinata HOM05D000717 ORTHO05D000555 1.5e-07 63.2 329 23.4
CAN.G93.46 Capsicum annuum HOM05D000717 ORTHO05D000555 1.5e-07 63.2 337 26.4
CARHR074030 Cardamine hirsuta HOM05D000717 ORTHO05D000555 1.5e-07 63.2 330 23.6
ECA246G4373 Erigeron canadensis HOM05D000717 ORTHO05D000555 1.5e-07 63.2 339 23.6
Sp7g03110 Schrenkiella parvula HOM05D000717 ORTHO05D000555 1.5e-07 63.2 334 24.9
C02p37250 Brassica napus HOM05D000717 ORTHO05D000555 2.0e-07 62.8 329 23.4
BolC2t09735H Brassica oleracea HOM05D000717 ORTHO05D000555 2.0e-07 62.8 329 23.4
BraA02t07344Z Brassica rapa HOM05D000717 ORTHO05D000555 2.0e-07 62.8 329 23.4
Ciclev10011669m.g Citrus clementina HOM05D000717 ORTHO05D000555 2.0e-07 62.8 342 25.7
Dinv38145 Davidia involucrata HOM05D000717 ORTHO05D000555 2.0e-07 62.8 348 25.6
A02p23510 Brassica napus HOM05D000717 ORTHO05D000555 2.6e-07 62.4 329 23.4
Cpa.g.sc19.101 Carica papaya HOM05D000717 ORTHO05D000555 2.6e-07 62.4 351 24.5
AUR62023136 Chenopodium quinoa HOM05D000717 ORTHO05D000555 3.4e-07 62.0 460 22.4
AUR62009454 Chenopodium quinoa HOM05D000717 ORTHO05D000555 4.4e-07 61.6 481 22.5
Sabra03G0016400 Salix brachista HOM05D000717 ORTHO05D000555 4.4e-07 61.6 349 25.8
unitig_899.g15115 Utricularia gibba HOM05D000717 ORTHO05D000555 4.4e-07 61.6 377 28.1
MD09G1077200 Malus domestica HOM05D000717 ORTHO05D000555 5.8e-07 61.2 487 23.8
RcHm_v2.0_Chr2g0134331 Rosa chinensis HOM05D000717 ORTHO05D000555 5.8e-07 61.2 335 24.8
BcaB04g19528 Brassica carinata HOM05D000717 ORTHO05D000555 7.6e-07 60.8 337 26.1
Lj9P497T46 Lonicera japonica HOM05D000717 ORTHO05D000555 7.6e-07 60.8 448 21.7
FAN09G4193 Fragaria x ananassa HOM05D000717 ORTHO05D000555 9.9e-07 60.5 468 22.6
Nitab4.5_0002249g0080 Nicotiana tabacum HOM05D000717 ORTHO05D000555 9.9e-07 60.5 337 26.4
BcaC06g33721 Brassica carinata HOM05D000717 ORTHO05D000555 1.3e-06 60.1 331 26.6
Duzib133G0330 Durio zibethinus HOM05D000717 ORTHO05D000555 1.3e-06 60.1 333 26.4
Nitab4.5_0003203g0050 Nicotiana tabacum HOM05D000717 ORTHO05D000555 1.3e-06 60.1 337 26.4
C07p38580 Brassica napus HOM05D000717 ORTHO05D000555 1.7e-06 59.7 331 26.6
BolC7t44379H Brassica oleracea HOM05D000717 ORTHO05D000555 1.7e-06 59.7 331 26.6
Glyma.02G260100 Glycine max HOM05D000717 ORTHO05D000555 1.7e-06 59.7 474 23.4
Lsat_1_v5_gn_4_88200 Lactuca sativa HOM05D000717 ORTHO05D000555 1.7e-06 59.7 366 25.7
MD17G1067600 Malus domestica HOM05D000717 ORTHO05D000555 1.7e-06 59.7 486 23.5
Os02g0191300 Oryza sativa ssp. japonica HOM05D000717 ORTHO05D000555 1.7e-06 59.7 462 23.2
Sp2g18180 Schrenkiella parvula HOM05D000717 ORTHO05D000555 1.7e-06 59.7 369 26.3
Aqoxy7G03589 Aquilegia oxysepala HOM05D000717 ORTHO05D000555 2.2e-06 59.3 332 24.7
Eucgr.F03925 Eucalyptus grandis HOM05D000717 ORTHO05D000555 2.2e-06 59.3 341 23.2
Medtr5g083770 Medicago truncatula HOM05D000717 ORTHO05D000555 2.2e-06 59.3 368 25.3
Prupe.3G093200 Prunus persica HOM05D000717 ORTHO05D000555 2.2e-06 59.3 337 25.2
MSTRG.8908 Avicennia marina HOM05D000717 ORTHO05D000555 2.9e-06 58.9 337 25.8
BcaC06g30845 Brassica carinata HOM05D000717 ORTHO05D000555 2.9e-06 58.9 350 26.3
Cpa.g.sc19.102 Carica papaya HOM05D000717 ORTHO05D000555 2.9e-06 58.9 354 23.4
FAN05G4139 Fragaria x ananassa HOM05D000717 ORTHO05D000555 2.9e-06 58.9 351 25.4
Prupe.3G246900 Prunus persica HOM05D000717 ORTHO05D000555 2.9e-06 58.9 475 22.3
QL05p032962 Quercus lobata HOM05D000717 ORTHO05D000555 2.9e-06 58.9 335 23.3
vmacro05602 Vaccinium macrocarpon HOM05D000717 ORTHO05D000555 2.9e-06 58.9 335 24.2
HPP92_022030 Vanilla planifolia HOM05D000717 ORTHO05D000555 2.9e-06 58.9 338 23.7
CDE04G2503 Ceratophyllum demersum HOM05D000717 ORTHO05D000555 3.7e-06 58.5 116 33.6
AUR62022974 Chenopodium quinoa HOM05D000717 ORTHO05D000555 3.7e-06 58.5 337 21.4
ECA232G1070 Erigeron canadensis HOM05D000717 ORTHO05D000555 3.7e-06 58.5 339 24.2
LjContig00357g0015591 Lotus japonicus HOM05D000717 ORTHO05D000555 3.7e-06 58.5 449 23.4
Sopen04g031050 Solanum pennellii HOM05D000717 ORTHO05D000555 3.7e-06 58.5 331 23.6
A09p04200 Brassica napus HOM05D000717 ORTHO05D000555 4.9e-06 58.2 334 26.0
BraA09t36057Z Brassica rapa HOM05D000717 ORTHO05D000555 4.9e-06 58.2 372 26.1
CSS0014663 Camellia sinensis var. sinensis HOM05D000717 ORTHO05D000555 4.9e-06 58.2 334 23.7
ClCG07G004780 Citrullus lanatus HOM05D000717 ORTHO05D000555 4.9e-06 58.2 339 24.5
Medtr5g083760 Medicago truncatula HOM05D000717 ORTHO05D000555 4.9e-06 58.2 329 26.7
Os06g0644700 Oryza sativa ssp. japonica HOM05D000717 ORTHO05D000555 4.9e-06 58.2 334 24.3
Phvul.008G219100 Phaseolus vulgaris HOM05D000717 ORTHO05D000555 4.9e-06 58.2 368 24.7
AT3G30390 Arabidopsis thaliana HOM05D000717 ORTHO05D000555 6.4e-06 57.8 331 25.7
CSS0043484 Camellia sinensis var. sinensis HOM05D000717 ORTHO05D000555 6.4e-06 57.8 334 24.0
Duzib211G0270 Durio zibethinus HOM05D000717 ORTHO05D000555 6.4e-06 57.8 331 26.0
Glyma.U031224 Glycine max HOM05D000717 ORTHO05D000555 6.4e-06 57.8 474 23.4
Lalb_Chr04g0250321 Lupinus albus HOM05D000717 ORTHO05D000555 6.4e-06 57.8 309 24.6
Manes.11G061300 Manihot esculenta HOM05D000717 ORTHO05D000555 6.4e-06 57.8 338 24.9
PGSC0003DMG400011639 Solanum tuberosum HOM05D000717 ORTHO05D000555 6.4e-06 57.8 301 26.9
TPR.G20210 Trifolium pratense HOM05D000717 ORTHO05D000555 6.4e-06 57.8 357 23.5
Actinidia18222 Actinidia chinensis HOM05D000717 ORTHO05D000555 8.4e-06 57.4 343 23.3
Ah.10g036040 Amaranthus hybridus HOM05D000717 ORTHO05D000555 8.4e-06 57.4 355 24.2
AL5G20100 Arabidopsis lyrata HOM05D000717 ORTHO05D000555 8.4e-06 57.4 331 25.7
arahy.Tifrunner.gnm1.ann1.Y81JPB Arachis hypogaea HOM05D000717 ORTHO05D000555 8.4e-06 57.4 349 25.5
BcaC04g23811 Brassica carinata HOM05D000717 ORTHO05D000555 8.4e-06 57.4 372 25.5
FAN02G0540 Fragaria x ananassa HOM05D000717 ORTHO05D000555 8.4e-06 57.4 347 25.1
MD01G1161200 Malus domestica HOM05D000717 ORTHO05D000555 8.4e-06 57.4 343 24.2
Rhsim08G0078600 Rhododendron simsii HOM05D000717 ORTHO05D000555 8.4e-06 57.4 334 25.4
SHI11245 Sapria himalayana HOM05D000717 ORTHO05D000555 8.4e-06 57.4 448 22.8
Solyc04g077460.3 Solanum lycopersicum HOM05D000717 ORTHO05D000555 8.4e-06 57.4 331 23.3
PGSC0003DMG401004944 Solanum tuberosum HOM05D000717 ORTHO05D000555 8.4e-06 57.4 331 23.6


User provided reference genes

Program Settings