Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 5.0e-161 571.2 330 100.0
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 5.1e-97 358.6 263 71.5
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 3.0e-89 332.8 275 62.9
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 3.7e-87 325.9 261 64.0
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 7.2e-83 311.6 272 61.0
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.3e-79 300.8 263 62.7
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 8.2e-79 298.1 259 62.5
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 4.1e-78 295.8 280 57.5
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 1.5e-77 293.9 280 56.8
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 2.0e-77 293.5 280 55.4
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 2.0e-77 293.5 280 57.1
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.0e-77 293.5 285 55.4
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 2.6e-77 293.1 279 56.3
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 3.4e-77 292.7 279 56.3
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 5.9e-77 292.0 285 55.1
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 7.7e-77 291.6 279 55.9
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 1.0e-76 291.2 285 55.1
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 1.3e-76 290.8 281 55.5
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 2.2e-76 290.0 277 54.5
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 2.2e-76 290.0 285 55.1
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 2.2e-76 290.0 284 57.0
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.9e-76 289.7 273 56.0
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.8e-76 289.3 277 55.2
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 5.0e-76 288.9 286 55.6
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 8.5e-76 288.1 268 56.0
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 1.1e-75 287.7 277 55.2
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 1.4e-75 287.3 286 54.9
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 3.2e-75 286.2 261 57.9
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.2e-75 285.8 255 56.9
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 4.2e-75 285.8 281 55.2
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 5.5e-75 285.4 274 55.5
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 7.2e-75 285.0 274 55.5
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 7.2e-75 285.0 276 55.8
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 7.2e-75 285.0 285 55.4
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 7.2e-75 285.0 274 54.7
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.2e-75 285.0 274 54.7
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 7.2e-75 285.0 274 54.4
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 7.2e-75 285.0 278 54.0
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 7.2e-75 285.0 286 54.5
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 7.2e-75 285.0 275 55.6
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 7.2e-75 285.0 281 53.4
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 9.4e-75 284.6 253 57.7
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 9.4e-75 284.6 270 55.2
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.2e-74 284.3 280 55.0
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 1.2e-74 284.3 280 55.0
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.2e-74 284.3 283 54.1
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 1.6e-74 283.9 272 54.4
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 2.1e-74 283.5 264 56.1
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 2.1e-74 283.5 283 53.7
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 2.7e-74 283.1 283 54.1
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.7e-74 283.1 268 56.3
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 3.6e-74 282.7 285 55.4
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 3.6e-74 282.7 286 54.5
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 3.6e-74 282.7 273 53.8
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 4.7e-74 282.3 279 55.2
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 4.7e-74 282.3 282 55.3
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 6.1e-74 282.0 273 54.2
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 6.1e-74 282.0 273 54.2
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 6.1e-74 282.0 261 57.1
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 7.9e-74 281.6 284 54.2
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 1.0e-73 281.2 274 54.7
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 1.4e-73 280.8 285 53.7
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.4e-73 280.8 273 55.7
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.8e-73 280.4 253 56.1
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.8e-73 280.4 279 54.1
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 3.0e-73 279.6 274 54.7
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 3.0e-73 279.6 299 51.8
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 3.9e-73 279.3 280 54.3
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 5.1e-73 278.9 280 53.6
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 5.1e-73 278.9 279 53.4
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 5.1e-73 278.9 279 53.8
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 8.8e-73 278.1 274 54.4
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 8.8e-73 278.1 274 54.4
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 8.8e-73 278.1 274 54.4
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 8.8e-73 278.1 278 55.0
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 8.8e-73 278.1 279 53.8
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.5e-72 277.3 280 54.3
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 2.0e-72 276.9 280 54.3
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 2.0e-72 276.9 280 53.2
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 2.6e-72 276.6 274 54.0
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 2.6e-72 276.6 276 54.7
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 3.3e-72 276.2 273 52.0
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 3.3e-72 276.2 274 54.0
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 5.7e-72 275.4 278 52.9
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 9.7e-72 274.6 280 53.9
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.7e-71 273.9 278 52.2
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 2.8e-71 273.1 267 54.3
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.8e-71 273.1 221 60.6
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 2.8e-71 273.1 261 56.7
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 3.7e-71 272.7 235 59.1
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 3.7e-71 272.7 235 59.1
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 6.3e-71 271.9 265 55.1
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.8e-70 270.4 231 58.9
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.4e-70 270.0 281 52.7
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 2.2e-68 263.5 280 52.9
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 3.8e-68 262.7 270 52.2
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 5.0e-68 262.3 221 59.3
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 6.5e-68 261.9 279 50.9
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 2.5e-67 260.0 279 50.9
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 2.5e-67 260.0 224 58.9
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 5.5e-67 258.8 278 49.6
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 3.6e-66 256.1 236 55.5
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 2.3e-65 253.4 204 62.7
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 3.0e-65 253.1 282 51.4
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 3.3e-64 249.6 244 52.9
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.1e-59 234.6 270 47.4
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 4.2e-59 232.6 276 47.5
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.8e-49 200.7 269 43.9
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 1.5e-40 171.0 221 47.5
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 8.6e-36 155.2 227 41.0
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 3.3e-35 153.3 187 48.1
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 4.4e-32 142.9 152 54.6
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 1.1e-30 138.3 166 47.6
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 1.6e-29 134.4 100 59.0
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 2.9e-23 113.6 148 46.6
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 4.6e-13 79.7 91 49.5
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 6.2e-10 69.3 66 50.0


User provided reference genes

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