Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G116 Micromonas commoda HOM05D007328 ORTHO05D009246 1.3e-55 219.5 115 100.0
Pp3c15_7370 Physcomitrium patens HOM05D007328 ORTHO05D009246 8.8e-12 73.9 106 37.7
Os04g0481500 Oryza sativa ssp. japonica HOM05D007328 ORTHO05D009246 9.1e-09 63.9 114 42.1
PGR044G2544 Punica granatum HOM05D007328 ORTHO05D009246 9.1e-09 63.9 104 40.4
AagrBONN_evm.TU.Sc2ySwM_369.482 Anthoceros agrestis HOM05D007328 ORTHO05D009246 2.0e-08 62.8 108 36.1
Gohir.D12G189600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 2.6e-08 62.4 106 38.7
Gorai.008G203400 Gossypium raimondii HOM05D007328 ORTHO05D009246 2.6e-08 62.4 106 38.7
Thecc.03G118600 Theobroma cacao HOM05D007328 ORTHO05D009246 2.6e-08 62.4 112 37.5
Ah.08g218420 Amaranthus hybridus HOM05D007328 ORTHO05D009246 3.4e-08 62.0 104 39.4
DCAR_007459 Daucus carota HOM05D007328 ORTHO05D009246 3.4e-08 62.0 101 40.6
QL10p005926 Quercus lobata HOM05D007328 ORTHO05D009246 3.4e-08 62.0 104 39.4
Sc04g0001180 Simmondsia chinensis HOM05D007328 ORTHO05D009246 3.4e-08 62.0 104 38.5
Prupe.5G161600 Prunus persica HOM05D007328 ORTHO05D009246 4.5e-08 61.6 104 40.4
CANSAT80G1532 Cannabis sativa HOM05D007328 ORTHO05D009246 5.9e-08 61.2 104 39.4
Duzib205G1420 Durio zibethinus HOM05D007328 ORTHO05D009246 5.9e-08 61.2 108 38.9
FvH4_5g06690 Fragaria vesca HOM05D007328 ORTHO05D009246 7.7e-08 60.8 104 37.5
FAN18G0524 Fragaria x ananassa HOM05D007328 ORTHO05D009246 7.7e-08 60.8 104 37.5
RcHm_v2.0_Chr7g0191941 Rosa chinensis HOM05D007328 ORTHO05D009246 7.7e-08 60.8 104 40.4
Sp5g33820 Schrenkiella parvula HOM05D007328 ORTHO05D009246 7.7e-08 60.8 104 40.4
Dinv38499 Davidia involucrata HOM05D007328 ORTHO05D009246 1.0e-07 60.5 104 38.5
CSS0000986 Camellia sinensis var. sinensis HOM05D007328 ORTHO05D009246 1.3e-07 60.1 104 38.5
PSO067G0004 Papaver somniferum HOM05D007328 ORTHO05D009246 1.3e-07 60.1 104 38.5
TWI23G0848 Tripterygium wilfordii HOM05D007328 ORTHO05D009246 1.3e-07 60.1 104 37.5
Gohir.A12G186600 Gossypium hirsutum HOM05D007328 ORTHO05D009246 1.7e-07 59.7 103 38.8
CARHR072340 Cardamine hirsuta HOM05D007328 ORTHO05D009246 2.2e-07 59.3 105 40.0
CAN.G126.95 Capsicum annuum HOM05D007328 ORTHO05D009246 2.9e-07 58.9 104 36.5
Rhsim12G0170200 Rhododendron simsii HOM05D007328 ORTHO05D009246 2.9e-07 58.9 104 38.5
PSO063G4259 Papaver somniferum HOM05D007328 ORTHO05D009246 3.8e-07 58.5 103 38.8
BcaB03g16036 Brassica carinata HOM05D004141 ORTHO05D005416 5.0e-07 58.2 100 41.0
CiPaw.12G033600 Carya illinoinensis HOM05D007328 ORTHO05D009246 5.0e-07 58.2 104 37.5
ECA246G4123 Erigeron canadensis HOM05D007328 ORTHO05D009246 5.0e-07 58.2 64 46.9
Hund05612 Selenicereus undatus HOM05D007328 ORTHO05D009246 5.0e-07 58.2 101 32.7
Aqoxy5G03651 Aquilegia oxysepala HOM05D007328 ORTHO05D009246 6.5e-07 57.8 112 35.7
Carub.0002s1493 Capsella rubella HOM05D007328 ORTHO05D009246 6.5e-07 57.8 104 39.4
Lsat_1_v5_gn_5_12821 Lactuca sativa HOM05D007328 ORTHO05D009246 6.5e-07 57.8 101 39.6
AL2G39190 Arabidopsis lyrata HOM05D007328 ORTHO05D009246 8.5e-07 57.4 104 39.4
CsaV3_1G000900 Cucumis sativus L. HOM05D007328 ORTHO05D009246 8.5e-07 57.4 103 36.9
FAN04G3262 Fragaria x ananassa HOM05D007328 ORTHO05D009246 8.5e-07 57.4 106 40.6
Solyc03g111790.4 Solanum lycopersicum HOM05D007328 ORTHO05D009246 1.1e-06 57.0 104 35.6
Sopen03g030890 Solanum pennellii HOM05D007328 ORTHO05D009246 1.1e-06 57.0 104 35.6
BcaC08g47455 Brassica carinata HOM05D007328 ORTHO05D009246 1.4e-06 56.6 100 40.0
A07p44000 Brassica napus HOM05D004141 ORTHO05D005416 1.4e-06 56.6 100 40.0
C06p52680 Brassica napus HOM05D004141 ORTHO05D005416 1.4e-06 56.6 100 40.0
BraA07t31907Z Brassica rapa HOM05D007328 ORTHO05D009246 1.4e-06 56.6 100 40.0
FAN13G1360 Fragaria x ananassa HOM05D007328 ORTHO05D009246 1.4e-06 56.6 106 39.6
Manes.06G112300 Manihot esculenta HOM05D007328 ORTHO05D009246 1.4e-06 56.6 62 45.2
Nitab4.5_0003542g0010 Nicotiana tabacum HOM05D007328 ORTHO05D009246 1.4e-06 56.6 101 35.6
AT1G78790 Arabidopsis thaliana HOM05D007328 ORTHO05D009246 1.9e-06 56.2 104 38.5
CDE02G4603 Ceratophyllum demersum HOM05D007328 ORTHO05D009246 1.9e-06 56.2 56 48.2
ClCG06G017550 Citrullus lanatus HOM05D007328 ORTHO05D009246 1.9e-06 56.2 101 37.6
Mapoly0166s0013 Marchantia polymorpha HOM05D007328 ORTHO05D009246 1.9e-06 56.2 68 42.6
MSTRG.4340 Avicennia marina HOM05D007328 ORTHO05D009246 2.5e-06 55.8 101 35.6
Migut.D02033 Erythranthe guttata HOM05D007328 ORTHO05D009246 2.5e-06 55.8 104 34.6
Lsat_1_v5_gn_3_90700 Lactuca sativa HOM05D007328 ORTHO05D009246 2.5e-06 55.8 100 38.0
AUR62001234 Chenopodium quinoa HOM05D007328 ORTHO05D009246 3.2e-06 55.5 65 43.1
Nitab4.5_0000510g0070 Nicotiana tabacum HOM05D007328 ORTHO05D009246 3.2e-06 55.5 101 35.6
Potri.012G090600 Populus trichocarpa HOM05D007328 ORTHO05D009246 3.2e-06 55.5 104 35.6
PGSC0003DMG400015227 Solanum tuberosum HOM05D007328 ORTHO05D009246 3.2e-06 55.5 104 34.6
GSVIVG01007592001 Vitis vinifera HOM05D007328 ORTHO05D009246 3.2e-06 55.5 101 37.6
Aa31LG4G2240 Aethionema arabicum HOM05D007328 ORTHO05D009246 5.5e-06 54.7 60 45.0
HPP92_017655 Vanilla planifolia HOM05D007328 ORTHO05D009246 5.5e-06 54.7 104 35.6
ATR0199G045 Amborella trichopoda HOM05D007328 ORTHO05D009246 7.2e-06 54.3 51 51.0
Glyma.17G125900 Glycine max HOM05D007328 ORTHO05D009246 7.2e-06 54.3 104 36.5
PRCOL_00004262 Prasinoderma coloniale HOM05D007328 ORTHO05D009246 7.2e-06 54.3 61 45.9
Sed0026647 Sechium edule HOM05D007328 ORTHO05D009246 7.2e-06 54.3 100 38.0
SGA_v2.0_scaffold7G04170 Striga asiatica HOM05D007328 ORTHO05D009246 7.2e-06 54.3 104 36.5
Haze_07631 Corylus avellana HOM05D007328 ORTHO05D009246 9.4e-06 53.9 105 38.1
Medtr4g104430 Medicago truncatula HOM05D007328 ORTHO05D009246 9.4e-06 53.9 104 34.6


User provided reference genes

Program Settings