Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO11G030 Micromonas commoda HOM05D005904 ORTHO05D007074 1.6e-132 476.1 234 100.0
AT3G13740 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 1.3e-22 110.9 159 39.6
A05p35680 Brassica napus HOM05D005904 ORTHO05D007074 2.2e-22 110.2 159 39.6
BraA05t22375Z Brassica rapa HOM05D005904 ORTHO05D007074 2.2e-22 110.2 159 39.6
BcaNung06385 Brassica carinata HOM05D005904 ORTHO05D007074 3.8e-22 109.4 139 41.7
C05p54090 Brassica napus HOM05D005904 ORTHO05D007074 3.8e-22 109.4 139 41.7
BolC5t34074H Brassica oleracea HOM05D005904 ORTHO05D007074 3.8e-22 109.4 139 41.7
BcaB06g25441 Brassica carinata HOM05D005904 ORTHO05D007074 5.0e-22 109.0 139 41.0
Thhalv10021279m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 6.5e-22 108.6 174 38.5
AL3G25790 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.1e-21 107.8 159 39.0
Sp3g11940 Schrenkiella parvula HOM05D005904 ORTHO05D007074 1.5e-21 107.5 174 38.5
Migut.O00807 Erythranthe guttata HOM05D005904 ORTHO05D007074 1.9e-21 107.1 154 40.9
Carub.0003s1326 Capsella rubella HOM05D005904 ORTHO05D007074 2.5e-21 106.7 163 38.7
GSVIVG01016848001 Vitis vinifera HOM05D005904 ORTHO05D007074 5.5e-21 105.5 138 41.3
Zm00001eb120860 Zea mays HOM05D005904 ORTHO05D007074 9.4e-21 104.8 133 41.4
Aa31LG10G930 Aethionema arabicum HOM05D005904 ORTHO05D007074 2.1e-20 103.6 154 36.4
AL1G63140 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 2.7e-20 103.2 138 38.4
MSTRG.22589 Avicennia marina HOM05D005904 ORTHO05D007074 2.7e-20 103.2 138 40.6
CsaV3_3G043900 Cucumis sativus L. HOM05D005904 ORTHO05D007074 4.7e-20 102.4 233 32.2
MELO3C013052.2 Cucumis melo HOM05D005904 ORTHO05D007074 6.1e-20 102.1 233 30.9
Carub.0001s4364 Capsella rubella HOM05D005904 ORTHO05D007074 8.0e-20 101.7 138 37.7
Os05g0318300 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 8.0e-20 101.7 139 39.6
Os11g0237700 Oryza sativa ssp. japonica HOM05D005904 ORTHO05D007074 8.0e-20 101.7 139 39.6
Peaxi162Scf00038g01518 Petunia axillaris HOM05D005904 ORTHO05D007074 8.0e-20 101.7 132 40.9
AT1G55140 Arabidopsis thaliana HOM05D005904 ORTHO05D007074 1.0e-19 101.3 138 37.0
DCAR_022713 Daucus carota HOM05D005904 ORTHO05D007074 1.0e-19 101.3 135 39.3
THA.LOC104810344 Tarenaya hassleriana HOM05D005904 ORTHO05D007074 1.0e-19 101.3 154 37.0
C03p92270 Brassica napus HOM05D005904 ORTHO05D007074 1.4e-19 100.9 138 36.2
BcaC01g01466 Brassica carinata HOM05D005904 ORTHO05D007074 1.8e-19 100.5 138 36.2
BolC3t21541H Brassica oleracea HOM05D005904 ORTHO05D007074 1.8e-19 100.5 138 36.2
CARHR044740 Cardamine hirsuta HOM05D005904 ORTHO05D007074 1.8e-19 100.5 138 36.2
Cc07_g04610 Coffea canephora HOM05D005904 ORTHO05D007074 4.0e-19 99.4 135 39.3
Thhalv10011744m.g Eutrema salsugineum HOM05D005904 ORTHO05D007074 4.0e-19 99.4 138 37.0
Actinidia21754 Actinidia chinensis HOM05D005904 ORTHO05D007074 5.2e-19 99.0 143 38.5
Aa31LG8G920 Aethionema arabicum HOM05D005904 ORTHO05D007074 5.2e-19 99.0 139 36.7
Cpa.g.sc25.58 Carica papaya HOM05D005904 ORTHO05D007074 6.8e-19 98.6 135 38.5
A08p00940 Brassica napus HOM05D005904 ORTHO05D007074 8.8e-19 98.2 138 35.5
BraA08t32149Z Brassica rapa HOM05D005904 ORTHO05D007074 8.8e-19 98.2 138 35.5
ClCG07G013710 Citrullus lanatus HOM05D005904 ORTHO05D007074 8.8e-19 98.2 233 31.3
Sp1g40800 Schrenkiella parvula HOM05D005904 ORTHO05D007074 8.8e-19 98.2 138 37.0
Sed0023540 Sechium edule HOM05D005904 ORTHO05D007074 8.8e-19 98.2 135 36.3
AagrBONN_evm.TU.Sc2ySwM_344.3620 Anthoceros agrestis HOM05D005904 ORTHO05D007074 1.2e-18 97.8 119 43.7
Lsat_1_v5_gn_5_134821 Lactuca sativa HOM05D005904 ORTHO05D007074 1.2e-18 97.8 149 35.6
unitig_0.g2872 Utricularia gibba HOM05D005904 ORTHO05D007074 1.2e-18 97.8 122 40.2
HanXRQChr10g0310911 Helianthus annuus HOM05D005904 ORTHO05D007074 1.5e-18 97.4 151 36.4
MD09G1194100 Malus domestica HOM05D005904 ORTHO05D007074 1.5e-18 97.4 135 40.0
Manes.04G139100 Manihot esculenta HOM05D005904 ORTHO05D007074 1.5e-18 97.4 135 38.5
Rhsim08G0232900 Rhododendron simsii HOM05D005904 ORTHO05D007074 2.0e-18 97.1 135 38.5
HPP92_003969 Vanilla planifolia HOM05D005904 ORTHO05D007074 2.0e-18 97.1 142 35.2
CANSAT56G1468 Cannabis sativa HOM05D005904 ORTHO05D007074 2.6e-18 96.7 138 36.2
AUR62038130 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.6e-18 96.7 156 38.5
Oeu039966.1 Olea europaea HOM05D005904 ORTHO05D007074 2.6e-18 96.7 138 37.7
Nn6g35465 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.4e-18 96.3 163 35.0
Prupe.3G050600 Prunus persica HOM05D005904 ORTHO05D007074 3.4e-18 96.3 116 42.2
Solyc03g121530.3 Solanum lycopersicum HOM05D005904 ORTHO05D007074 3.4e-18 96.3 132 38.6
CiPaw.02G140600 Carya illinoinensis HOM05D005904 ORTHO05D007074 4.4e-18 95.9 135 39.3
RcHm_v2.0_Chr6g0267021 Rosa chinensis HOM05D005904 ORTHO05D007074 4.4e-18 95.9 120 42.5
CDE06G0040 Ceratophyllum demersum HOM05D005904 ORTHO05D007074 5.7e-18 95.5 130 38.5
Dinv30384 Davidia involucrata HOM05D005904 ORTHO05D007074 5.7e-18 95.5 152 36.2
FvH4_4g12940 Fragaria vesca HOM05D005904 ORTHO05D007074 5.7e-18 95.5 119 42.0
FAN07G2466 Fragaria x ananassa HOM05D005904 ORTHO05D007074 5.7e-18 95.5 119 42.0
TWI31G1228 Tripterygium wilfordii HOM05D005904 ORTHO05D007074 5.7e-18 95.5 154 37.0
BcaB04g16991 Brassica carinata HOM05D005904 ORTHO05D007074 7.5e-18 95.1 120 37.5
CSS0014810 Camellia sinensis var. sinensis HOM05D005904 ORTHO05D007074 7.5e-18 95.1 135 38.5
CAN.G1389.13 Capsicum annuum HOM05D005904 ORTHO05D007074 7.5e-18 95.1 132 37.9
CBR_g18726 Chara braunii HOM05D005904 ORTHO05D007074 9.8e-18 94.7 156 34.6
PSO210G2600 Papaver somniferum HOM05D005904 ORTHO05D007074 9.8e-18 94.7 135 36.3
QL05p012810 Quercus lobata HOM05D005904 ORTHO05D007074 9.8e-18 94.7 194 34.0
Gohir.A10G060500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 1.3e-17 94.4 157 35.7
ECA234G0674 Erigeron canadensis HOM05D005904 ORTHO05D007074 2.2e-17 93.6 132 37.9
SalBow6G4349 Salvia bowleyana HOM05D005904 ORTHO05D007074 2.2e-17 93.6 173 35.3
PGR044G1952 Punica granatum HOM05D005904 ORTHO05D007074 2.8e-17 93.2 176 34.7
Duzib235G0974 Durio zibethinus HOM05D005904 ORTHO05D007074 3.7e-17 92.8 135 34.8
PSO210G1067 Papaver somniferum HOM05D005904 ORTHO05D007074 3.7e-17 92.8 135 35.6
Sabra01G0156900 Salix brachista HOM05D005904 ORTHO05D007074 3.7e-17 92.8 135 37.0
Thecc.06G110900 Theobroma cacao HOM05D005904 ORTHO05D007074 3.7e-17 92.8 221 31.2
TAR626G1971 Trochodendron aralioides HOM05D005904 ORTHO05D007074 3.7e-17 92.8 135 36.3
Gorai.011G065700 Gossypium raimondii HOM05D005904 ORTHO05D007074 6.3e-17 92.0 224 30.8
Sc12g0010220 Simmondsia chinensis HOM05D005904 ORTHO05D007074 6.3e-17 92.0 138 36.2
TAR383G0617 Trochodendron aralioides HOM05D005904 ORTHO05D007074 6.3e-17 92.0 152 36.2
Ah.08g216180 Amaranthus hybridus HOM05D005904 ORTHO05D007074 8.3e-17 91.7 151 33.8
Lj3g0018823 Lotus japonicus HOM05D005904 ORTHO05D007074 1.1e-16 91.3 134 36.6
VMungo1080G0888 Vigna mungo HOM05D005904 ORTHO05D007074 1.1e-16 91.3 134 36.6
Potri.001G200300 Populus trichocarpa HOM05D005904 ORTHO05D007074 1.4e-16 90.9 135 35.6
Lj5A45T77 Lonicera japonica HOM05D005904 ORTHO05D007074 1.8e-16 90.5 132 37.1
MBI01_g01270_MAGBIO Magnolia biondii HOM05D005904 ORTHO05D007074 1.8e-16 90.5 138 37.0
AUR62009818 Chenopodium quinoa HOM05D005904 ORTHO05D007074 2.4e-16 90.1 135 40.7
Glyma.15G023700 Glycine max HOM05D005904 ORTHO05D007074 2.4e-16 90.1 134 36.6
Lalb_Chr24g0396341 Lupinus albus HOM05D005904 ORTHO05D007074 2.4e-16 90.1 178 34.3
Psat5g293640 Pisum sativum HOM05D005904 ORTHO05D007074 2.4e-16 90.1 134 37.3
Hund18723 Selenicereus undatus HOM05D005904 ORTHO05D007074 2.4e-16 90.1 138 36.2
arahy.Tifrunner.gnm1.ann1.21ET8L Arachis hypogaea HOM05D005904 ORTHO05D007074 3.1e-16 89.7 137 35.8
arahy.Tifrunner.gnm1.ann1.LV1MMJ Arachis hypogaea HOM05D005904 ORTHO05D007074 3.1e-16 89.7 137 35.8
Eucgr.F03129 Eucalyptus grandis HOM05D005904 ORTHO05D007074 4.1e-16 89.4 135 35.6
Gohir.D10G061500 Gossypium hirsutum HOM05D005904 ORTHO05D007074 5.4e-16 89.0 224 30.4
Phvul.005G160100 Phaseolus vulgaris HOM05D005904 ORTHO05D007074 5.4e-16 89.0 137 35.0
Pp3c14_13400 Physcomitrium patens HOM05D005904 ORTHO05D007074 1.2e-15 87.8 119 41.2
Aqoxy7G04049 Aquilegia oxysepala HOM05D005904 ORTHO05D007074 1.6e-15 87.4 135 37.0
EL10Ac7g15769 Beta vulgaris HOM05D005904 ORTHO05D007074 1.6e-15 87.4 135 35.6
Nitab4.5_0001295g0010 Nicotiana tabacum HOM05D005904 ORTHO05D007074 1.6e-15 87.4 125 37.6
Medtr2g100220 Medicago truncatula HOM05D005904 ORTHO05D007074 2.0e-15 87.0 134 35.8
SMO134G0002 Selaginella moellendorffii HOM05D005904 ORTHO05D007074 7.7e-15 85.1 119 39.5
FAN12G1666 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.3e-14 84.3 129 40.3
Ciclev10026243m.g Citrus clementina HOM05D005904 ORTHO05D007074 2.9e-14 83.2 148 36.5
Mapoly0003s0025 Marchantia polymorpha HOM05D005904 ORTHO05D007074 1.9e-13 80.5 144 34.0
DCAR_016164 Daucus carota HOM05D001529 ORTHO05D003309 3.2e-13 79.7 162 30.9
Nn8g38876 Nelumbo nucifera HOM05D005904 ORTHO05D007074 3.2e-13 79.7 131 33.6
SGA_v2.0_scaffold45G16976 Striga asiatica HOM05D005904 ORTHO05D007074 3.2e-13 79.7 201 32.3
COL.COLO4_30653 Corchorus olitorius HOM05D005904 ORTHO05D007074 4.2e-13 79.3 170 31.2
Lj9A518G85 Lonicera japonica HOM05D005904 ORTHO05D007074 7.2e-13 78.6 145 33.1
SEGI_12033 Sequoiadendron giganteum HOM05D005904 ORTHO05D007074 1.4e-11 74.3 129 34.1
ATR0661G556 Amborella trichopoda HOM05D005904 ORTHO05D007074 2.3e-11 73.6 117 37.6
FAN17G1021 Fragaria x ananassa HOM05D005904 ORTHO05D007074 1.7e-09 67.4 83 44.6
Sopen03g040340 Solanum pennellii HOM05D005904 ORTHO05D007074 2.2e-09 67.0 80 45.0
vmacro18789 Vaccinium macrocarpon HOM05D005904 ORTHO05D007074 1.1e-08 64.7 140 29.3
AL180U10010 Arabidopsis lyrata HOM05D005904 ORTHO05D007074 1.6e-07 60.8 105 36.2
Atru.chr1.3688 Acer truncatum HOM05D005904 ORTHO05D007074 4.5e-07 59.3 151 25.2
PGSC0003DMG400002591 Solanum tuberosum HOM05D005904 ORTHO05D007074 4.5e-07 59.3 76 40.8


User provided reference genes

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