Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G317 Micromonas commoda HOM05D005679 ORTHO05D007228 1.9e-80 302.4 145 100.0
Mapoly0066s0044 Marchantia polymorpha HOM05D005679 ORTHO05D007228 6.9e-30 134.4 143 50.3
AagrBONN_evm.TU.Sc2ySwM_228.1072 Anthoceros agrestis HOM05D005679 ORTHO05D007228 2.9e-28 129.0 145 49.7
CSS0002811 Camellia sinensis var. sinensis HOM05D005679 ORTHO05D007228 6.0e-26 121.3 145 45.5
CBR_g961 Chara braunii HOM05D005679 ORTHO05D007228 6.0e-26 121.3 142 43.0
Cre01.g042150 Chlamydomonas reinhardtii HOM05D005679 ORTHO05D007228 1.3e-25 120.2 142 47.9
Aqoxy4G02804 Aquilegia oxysepala HOM05D005679 ORTHO05D007228 1.8e-25 119.8 145 42.8
ClCG10G019090 Citrullus lanatus HOM05D005679 ORTHO05D007228 1.8e-25 119.8 144 46.5
Os05g0357700 Oryza sativa ssp. japonica HOM05D005679 ORTHO05D007228 2.3e-25 119.4 144 41.0
Pp3c4_17190 Physcomitrium patens HOM05D005679 ORTHO05D007228 2.3e-25 119.4 147 44.9
MELO3C009462.2 Cucumis melo HOM05D005679 ORTHO05D007228 3.9e-25 118.6 144 45.8
Oeu047193.1 Olea europaea HOM05D005679 ORTHO05D007228 3.9e-25 118.6 144 42.4
Sp4g18530 Schrenkiella parvula HOM05D005679 ORTHO05D007228 3.9e-25 118.6 145 42.1
BcaB01g03852 Brassica carinata HOM05D005679 ORTHO05D007228 5.1e-25 118.2 145 42.1
Ciclev10012247m.g Citrus clementina HOM05D005679 ORTHO05D007228 5.1e-25 118.2 145 42.1
CsaV3_3G037160 Cucumis sativus L. HOM05D005679 ORTHO05D007228 5.1e-25 118.2 144 45.1
Dinv21221 Davidia involucrata HOM05D005679 ORTHO05D007228 5.1e-25 118.2 145 43.4
Thhalv10016950m.g Eutrema salsugineum HOM05D005679 ORTHO05D007228 8.7e-25 117.5 145 41.4
Peaxi162Scf00040g01117 Petunia axillaris HOM05D005679 ORTHO05D007228 8.7e-25 117.5 144 45.1
Atru.chr8.1566 Acer truncatum HOM05D005679 ORTHO05D007228 1.1e-24 117.1 145 43.4
BcaC01g05669 Brassica carinata HOM05D005679 ORTHO05D007228 2.5e-24 115.9 145 42.1
BolC3t14741H Brassica oleracea HOM05D005679 ORTHO05D007228 2.5e-24 115.9 145 42.1
Carub.0004s1806 Capsella rubella HOM05D005679 ORTHO05D007228 2.5e-24 115.9 145 42.1
Actinidia05440 Actinidia chinensis HOM05D005679 ORTHO05D007228 3.3e-24 115.5 145 43.4
CAN.G397.28 Capsicum annuum HOM05D005679 ORTHO05D007228 3.3e-24 115.5 144 45.8
Lalb_Chr21g0315771 Lupinus albus HOM05D005679 ORTHO05D007228 4.3e-24 115.2 145 42.8
PSO339G3946 Papaver somniferum HOM05D005679 ORTHO05D007228 4.3e-24 115.2 145 44.1
Potri.006G083300 Populus trichocarpa HOM05D005679 ORTHO05D007228 4.3e-24 115.2 145 43.4
Sabra06G0062900 Salix brachista HOM05D005679 ORTHO05D007228 4.3e-24 115.2 145 43.4
Aa31LG5G21440 Aethionema arabicum HOM05D005679 ORTHO05D007228 5.6e-24 114.8 145 42.1
A03p20010 Brassica napus HOM05D005679 ORTHO05D007228 5.6e-24 114.8 145 41.4
C03p23450 Brassica napus HOM05D005679 ORTHO05D007228 5.6e-24 114.8 145 41.4
BraA03t11252Z Brassica rapa HOM05D005679 ORTHO05D007228 5.6e-24 114.8 145 41.4
Rhsim03G0076400 Rhododendron simsii HOM05D005679 ORTHO05D007228 7.4e-24 114.4 145 44.1
TAR633G0672 Trochodendron aralioides HOM05D005679 ORTHO05D007228 1.3e-23 113.6 142 43.7
Migut.J01051 Erythranthe guttata HOM05D005679 ORTHO05D007228 1.6e-23 113.2 145 42.1
Prupe.7G112900 Prunus persica HOM05D005679 ORTHO05D007228 1.6e-23 113.2 145 42.1
HPP92_006355 Vanilla planifolia HOM05D005679 ORTHO05D007228 1.6e-23 113.2 145 40.7
AL4G32420 Arabidopsis lyrata HOM05D005679 ORTHO05D007228 2.8e-23 112.5 145 40.0
Sopen09g004390 Solanum pennellii HOM05D005679 ORTHO05D007228 2.8e-23 112.5 144 43.1
CANSAT80G1368 Cannabis sativa HOM05D005679 ORTHO05D007228 3.7e-23 112.1 145 40.7
VMungo0720G0655 Vigna mungo HOM05D005679 ORTHO05D007228 3.7e-23 112.1 145 42.1
Glyma.10G071200 Glycine max HOM05D005679 ORTHO05D007228 4.8e-23 111.7 145 40.7
Solyc09g009630.3 Solanum lycopersicum HOM05D005679 ORTHO05D007228 4.8e-23 111.7 144 43.1
PGSC0003DMG401002654 Solanum tuberosum HOM05D005679 ORTHO05D007228 4.8e-23 111.7 144 43.1
Glyma.13G153052 Glycine max HOM05D005679 ORTHO05D007228 6.2e-23 111.3 145 40.7
Hma1.2p1_0536F.1_g174040 Hydrangea macrophylla HOM05D005679 ORTHO05D007228 6.2e-23 111.3 146 43.2
AT2G36305 Arabidopsis thaliana HOM05D005679 ORTHO05D007228 8.2e-23 110.9 145 39.3
Cc06_g05640 Coffea canephora HOM05D005679 ORTHO05D007228 8.2e-23 110.9 145 44.1
Nn6g34939 Nelumbo nucifera HOM05D005679 ORTHO05D007228 8.2e-23 110.9 157 39.5
Phvul.007G229100 Phaseolus vulgaris HOM05D005679 ORTHO05D007228 8.2e-23 110.9 145 41.4
MSTRG.5837 Avicennia marina HOM05D005679 ORTHO05D007228 1.4e-22 110.2 145 42.8
MD12G1023600 Malus domestica HOM05D005679 ORTHO05D007228 1.4e-22 110.2 145 42.1
COL.COLO4_29768 Corchorus olitorius HOM05D005679 ORTHO05D007228 2.4e-22 109.4 145 41.4
HanXRQChr11g0340241 Helianthus annuus HOM05D005679 ORTHO05D007228 2.4e-22 109.4 145 41.4
Psat6g080840 Pisum sativum HOM05D005679 ORTHO05D007228 2.4e-22 109.4 145 42.1
GSVIVG01033827001 Vitis vinifera HOM05D005679 ORTHO05D007228 2.4e-22 109.4 145 41.4
PSO384G2019 Papaver somniferum HOM05D005679 ORTHO05D007228 3.1e-22 109.0 145 42.1
HanXRQChr10g0314031 Helianthus annuus HOM05D005679 ORTHO05D007228 4.0e-22 108.6 145 41.4
HanXRQChr10g0313901 Helianthus annuus HOM05D005679 ORTHO05D007228 5.3e-22 108.2 145 41.4
SGA_v2.0_scaffold13G06736 Striga asiatica HOM05D005679 ORTHO05D007228 5.3e-22 108.2 145 41.4
Eucgr.A01508 Eucalyptus grandis HOM05D005679 ORTHO05D007228 6.9e-22 107.8 142 42.3
Duzib093G1300 Durio zibethinus HOM05D005679 ORTHO05D007228 1.2e-21 107.1 145 42.1
CiPaw.09G012600 Carya illinoinensis HOM05D005679 ORTHO05D007228 1.5e-21 106.7 145 40.0
HanXRQChr10g0313981 Helianthus annuus HOM05D005679 ORTHO05D007228 1.5e-21 106.7 145 40.0
HanXRQChr13g0424691 Helianthus annuus HOM05D005679 ORTHO05D007228 1.5e-21 106.7 145 40.0
Gohir.A04G063700 Gossypium hirsutum HOM05D005679 ORTHO05D007228 2.6e-21 105.9 145 40.0
Sc02g0000910 Simmondsia chinensis HOM05D005679 ORTHO05D007228 2.6e-21 105.9 144 41.7
Ah.08g210640 Amaranthus hybridus HOM05D005679 ORTHO05D007228 3.4e-21 105.5 145 39.3
Lj5g0006681 Lotus japonicus HOM05D005679 ORTHO05D007228 4.5e-21 105.1 145 40.0
MD14G1020800 Malus domestica HOM05D005679 ORTHO05D007228 4.5e-21 105.1 145 40.7
THA.LOC104807091 Tarenaya hassleriana HOM05D005679 ORTHO05D007228 4.5e-21 105.1 145 37.9
arahy.Tifrunner.gnm1.ann1.J82H2E Arachis hypogaea HOM05D005679 ORTHO05D007228 5.8e-21 104.8 145 40.7
Gohir.D04G100800 Gossypium hirsutum HOM05D005679 ORTHO05D007228 5.8e-21 104.8 145 38.6
Thecc.05G087100 Theobroma cacao HOM05D005679 ORTHO05D007228 7.6e-21 104.4 145 40.0
Medtr1g060300 Medicago truncatula HOM05D005679 ORTHO05D007228 1.3e-20 103.6 145 38.6
PRCOL_00001551 Prasinoderma coloniale HOM05D005679 ORTHO05D007228 1.3e-20 103.6 132 43.2
TPR.G31118 Trifolium pratense HOM05D005679 ORTHO05D007228 1.3e-20 103.6 145 39.3
arahy.Tifrunner.gnm1.ann1.5KE53F Arachis hypogaea HOM05D005679 ORTHO05D007228 1.7e-20 103.2 145 40.7
AUR62028550 Chenopodium quinoa HOM05D005679 ORTHO05D007228 1.7e-20 103.2 145 41.4
PGR004G0569 Punica granatum HOM05D005679 ORTHO05D007228 1.7e-20 103.2 142 41.5
EL10Ac7g16934 Beta vulgaris HOM05D005679 ORTHO05D007228 2.9e-20 102.4 145 40.7
Gorai.009G404000 Gossypium raimondii HOM05D005679 ORTHO05D007228 2.9e-20 102.4 145 38.6
Lsat_1_v5_gn_1_48041 Lactuca sativa HOM05D005679 ORTHO05D007228 2.9e-20 102.4 145 39.3
CDE02G3258 Ceratophyllum demersum HOM05D005679 ORTHO05D007228 4.9e-20 101.7 102 48.0
TWI77G0106 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 4.9e-20 101.7 129 42.6
RcHm_v2.0_Chr3g0472981 Rosa chinensis HOM05D005679 ORTHO05D007228 1.1e-19 100.5 145 38.6
vmacro07401 Vaccinium macrocarpon HOM05D005679 ORTHO05D007228 1.1e-19 100.5 168 37.5
ATR0568G150 Amborella trichopoda HOM05D005679 ORTHO05D007228 1.4e-19 100.1 107 47.7
FvH4_6g18450 Fragaria vesca HOM05D005679 ORTHO05D007228 2.5e-19 99.4 145 37.9
FAN14G3109 Fragaria x ananassa HOM05D005679 ORTHO05D007228 2.5e-19 99.4 145 37.9
FAN05G0675 Fragaria x ananassa HOM05D005679 ORTHO05D007228 4.2e-19 98.6 145 39.3
SHI23954 Sapria himalayana HOM05D005679 ORTHO05D007228 5.5e-19 98.2 147 40.1
SMO203G0038 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 5.5e-19 98.2 166 37.3
unitig_749.g14296 Utricularia gibba HOM05D005679 ORTHO05D007228 2.7e-18 95.9 107 48.6
TWI53G0317 Tripterygium wilfordii HOM05D005679 ORTHO05D007228 3.5e-18 95.5 109 45.9
Manes.09G056451 Manihot esculenta HOM05D005679 ORTHO05D007228 6.0e-18 94.7 144 38.2
HanXRQChr10g0314011 Helianthus annuus HOM05D005679 ORTHO05D007228 2.3e-17 92.8 107 44.9
ECA248G1272 Erigeron canadensis HOM05D005679 ORTHO05D007228 5.1e-17 91.7 107 45.8
FAN05G4213 Fragaria x ananassa HOM05D005679 ORTHO05D007228 5.1e-17 91.7 107 44.9
Sed0012745 Sechium edule HOM05D005679 ORTHO05D007228 5.1e-17 91.7 101 46.5
QL07p039311 Quercus lobata HOM05D005679 ORTHO05D007228 6.7e-17 91.3 109 43.1
Haze_19592 Corylus avellana HOM05D005679 ORTHO05D007228 1.9e-16 89.7 109 44.0
FAN02G2684 Fragaria x ananassa HOM05D005679 ORTHO05D007228 9.7e-16 87.4 154 37.0
SMO327G0022 Selaginella moellendorffii HOM05D005679 ORTHO05D007228 9.7e-16 87.4 144 36.8
AUR62033502 Chenopodium quinoa HOM05D005679 ORTHO05D007228 2.4e-14 82.8 142 36.6
Nitab4.5_0001725g0030 Nicotiana tabacum HOM05D005679 ORTHO05D007228 5.0e-12 75.1 144 35.4
Lj9A526G37 Lonicera japonica HOM05D005679 ORTHO05D007228 6.5e-12 74.7 145 35.9
Sed0004661 Sechium edule HOM05D005679 ORTHO05D007228 5.5e-11 71.6 89 43.8
Lsat_1_v5_gn_1_48021 Lactuca sativa HOM05D005679 ORTHO05D007228 1.2e-10 70.5 83 39.8
Nitab4.5_0002400g0100 Nicotiana tabacum HOM05D005679 ORTHO05D007228 7.9e-10 67.8 139 33.8
Ca_26654_v3 Cicer arietinum L. HOM05D005679 ORTHO05D007228 3.0e-09 65.9 89 42.7
Gohir.D09G135950 Gossypium hirsutum HOM05D005679 ORTHO05D007228 3.0e-09 65.9 78 43.6
Gorai.006G155900 Gossypium raimondii HOM05D005679 ORTHO05D007228 6.7e-09 64.7 78 42.3
HanXRQChr10g0313891 Helianthus annuus HOM05D005679 ORTHO05D007228 1.1e-08 63.9 89 42.7
TAR636G2700 Trochodendron aralioides HOM05D005679 ORTHO05D007228 9.7e-08 60.8 88 42.0
Zm00001eb285910 Zea mays HOM05D005679 ORTHO05D007228 1.1e-06 57.4 144 28.5


User provided reference genes

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