Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G298 Micromonas commoda HOM05D006132 ORTHO05D007305 0.0e+00 5013.0 2992 100.0
AagrBONN_evm.TU.Sc2ySwM_344.875 Anthoceros agrestis HOM05D006132 ORTHO05D007305 2.1e-27 130.6 469 27.3
MBI01_g01249_MAGBIO Magnolia biondii HOM05D006132 ORTHO05D007305 2.5e-25 123.6 508 25.6
HPP92_019594 Vanilla planifolia HOM05D006132 ORTHO05D007305 9.5e-25 121.7 501 25.9
Aqoxy7G03955 Aquilegia oxysepala HOM05D006132 ORTHO05D007305 2.3e-23 117.1 430 26.5
Mapoly0021s0014 Marchantia polymorpha HOM05D006132 ORTHO05D007305 4.0e-23 116.3 501 25.5
Thhalv10026823m.g Eutrema salsugineum HOM05D006132 ORTHO05D007305 5.2e-23 115.9 475 25.9
AL7G18910 Arabidopsis lyrata HOM05D006132 ORTHO05D007305 1.2e-22 114.8 485 25.2
CBR_g22939 Chara braunii HOM05D006132 ORTHO05D000048 1.2e-22 114.8 501 25.5
Pp3c4_1880 Physcomitrium patens HOM05D006132 ORTHO05D007305 2.0e-22 114.0 490 27.1
COL.COLO4_21010 Corchorus olitorius HOM05D006132 ORTHO05D007305 3.4e-22 113.2 502 25.5
GSVIVG01035326001 Vitis vinifera HOM05D006132 ORTHO05D007305 3.4e-22 113.2 486 25.5
CsaV3_3G048410 Cucumis sativus L. HOM05D006132 ORTHO05D007305 7.6e-22 112.1 499 26.3
Carub.0007s0767 Capsella rubella HOM05D006132 ORTHO05D007305 9.9e-22 111.7 475 25.9
Gohir.A07G022180 Gossypium hirsutum HOM05D006132 ORTHO05D007305 9.9e-22 111.7 487 24.8
Hund19486 Selenicereus undatus HOM05D006132 ORTHO05D007305 9.9e-22 111.7 472 24.4
vmacro00180 Vaccinium macrocarpon HOM05D006132 ORTHO05D007305 9.9e-22 111.7 437 26.5
Ah.11g044450 Amaranthus hybridus HOM05D006132 ORTHO05D007305 1.7e-21 110.9 472 24.6
Gorai.001G024600 Gossypium raimondii HOM05D006132 ORTHO05D007305 1.7e-21 110.9 487 24.8
Atru.chr7.2044 Acer truncatum HOM05D006132 ORTHO05D007305 2.2e-21 110.5 486 24.7
ATR0815G026 Amborella trichopoda HOM05D006132 ORTHO05D007305 2.2e-21 110.5 506 24.7
MSTRG.25925 Avicennia marina HOM05D006132 ORTHO05D007305 2.2e-21 110.5 506 24.9
Migut.A00170 Erythranthe guttata HOM05D006132 ORTHO05D007305 2.2e-21 110.5 503 24.5
BcaC09g52078 Brassica carinata HOM05D006132 ORTHO05D007305 2.9e-21 110.2 475 25.3
A01p05470 Brassica napus HOM05D006132 ORTHO05D007305 2.9e-21 110.2 475 25.3
C01p06070 Brassica napus HOM05D006132 ORTHO05D007305 2.9e-21 110.2 475 25.3
CAN.G9.6 Capsicum annuum HOM05D006132 ORTHO05D007305 2.9e-21 110.2 485 23.7
ClCG11G015000 Citrullus lanatus HOM05D006132 ORTHO05D007305 3.7e-21 109.8 499 26.3
Dinv02537 Davidia involucrata HOM05D006132 ORTHO05D007305 6.4e-21 109.0 475 26.1
PSO210G7354 Papaver somniferum HOM05D006132 ORTHO05D007305 6.4e-21 109.0 420 25.0
AT4G32820 Arabidopsis thaliana HOM05D006132 ORTHO05D007305 8.4e-21 108.6 485 24.9
MELO3C003478.2 Cucumis melo HOM05D006132 ORTHO05D007305 1.1e-20 108.2 499 26.3
Dinv23402 Davidia involucrata HOM05D006132 ORTHO05D007305 1.1e-20 108.2 475 25.9
CSS0000087 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 1.4e-20 107.8 487 25.5
PSO210G2191 Papaver somniferum HOM05D006132 ORTHO05D007305 1.4e-20 107.8 485 24.5
Sed0028022 Sechium edule HOM05D006132 ORTHO05D007305 1.4e-20 107.8 494 25.7
CSS0048337 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 3.2e-20 106.7 502 24.5
Haze_01967 Corylus avellana HOM05D006132 ORTHO05D007305 4.1e-20 106.3 475 24.6
THA.LOC104818581 Tarenaya hassleriana HOM05D006132 ORTHO05D007305 5.4e-20 105.9 503 24.7
Sc09g0009530 Simmondsia chinensis HOM05D006132 ORTHO05D007305 1.2e-19 104.8 499 23.2
Duzib168G1248 Durio zibethinus HOM05D006132 ORTHO05D007305 1.6e-19 104.4 452 25.9
Nn8g39007 Nelumbo nucifera HOM05D006132 ORTHO05D007305 1.6e-19 104.4 433 25.6
Sp7g30590 Schrenkiella parvula HOM05D006132 ORTHO05D007305 1.6e-19 104.4 485 23.9
Thecc.09G049200 Theobroma cacao HOM05D006132 ORTHO05D007305 2.1e-19 104.0 466 25.5
Nitab4.5_0000318g0080 Nicotiana tabacum HOM05D006132 ORTHO05D007305 7.8e-19 102.1 491 23.6
TAR636G1718 Trochodendron aralioides HOM05D006132 ORTHO05D007305 7.8e-19 102.1 494 23.9
CiPaw.07G201400 Carya illinoinensis HOM05D006132 ORTHO05D007305 1.0e-18 101.7 459 25.1
RcHm_v2.0_Chr6g0306811 Rosa chinensis HOM05D006132 ORTHO05D007305 1.7e-18 100.9 467 25.7
AUR62040212 Chenopodium quinoa HOM05D006132 ORTHO05D007305 3.0e-18 100.1 470 23.4
Ciclev10010526m.g Citrus clementina HOM05D006132 ORTHO05D007305 8.6e-18 98.6 462 25.1
QL12p040855 Quercus lobata HOM05D006132 ORTHO05D007305 8.6e-18 98.6 477 25.2
SGA_v2.0_scaffold103G30057 Striga asiatica HOM05D006132 ORTHO05D007305 5.6e-17 95.9 486 24.7
Manes.03G057600 Manihot esculenta HOM05D006132 ORTHO05D007305 7.3e-17 95.5 426 24.2
Potri.018G057900 Populus trichocarpa HOM05D006132 ORTHO05D007305 1.2e-16 94.7 472 23.3
PGR031G1631 Punica granatum HOM05D006132 ORTHO05D007305 1.2e-16 94.7 424 23.8
SalBow4G1475 Salvia bowleyana HOM05D006132 ORTHO05D007305 1.2e-16 94.7 294 26.9
FvH4_2g35140 Fragaria vesca HOM05D006132 ORTHO05D007305 2.8e-16 93.6 429 24.5
TWI34G0160 Tripterygium wilfordii HOM05D006132 ORTHO05D007305 3.6e-16 93.2 425 24.5
MCO14G002 Micromonas commoda HOM05D000104 ORTHO05D003467 1.1e-15 91.7 86 54.7
EL10Ac2g03960 Beta vulgaris HOM05D006132 ORTHO05D007305 4.0e-15 89.7 488 23.8
DCAR_007699 Daucus carota HOM05D006132 ORTHO05D007305 7.6e-14 85.5 440 24.1
HanXRQChr03g0077991 Helianthus annuus HOM05D006132 ORTHO05D007305 7.6e-14 85.5 303 25.7
Lj8C561G12 Lonicera japonica HOM05D006132 ORTHO05D007305 1.4e-12 81.3 241 28.6
Peaxi162Scf00840g00429 Petunia axillaris HOM05D006132 ORTHO05D007305 1.6e-11 77.8 347 24.2
Glyma.06G088900 Glycine max HOM05D006132 ORTHO05D007305 4.6e-11 76.3 213 31.0
Medtr3g110417 Medicago truncatula HOM05D006132 ORTHO05D007305 4.6e-11 76.3 137 32.8
Prupe.1G443500 Prunus persica HOM05D006132 ORTHO05D007305 4.6e-11 76.3 212 28.8
Glyma.04G087200 Glycine max HOM05D006132 ORTHO05D007305 6.0e-11 75.9 137 32.8
FAN20G0110 Fragaria x ananassa HOM05D006132 ORTHO05D007305 7.8e-11 75.5 207 28.5
Phvul.009G112700 Phaseolus vulgaris HOM05D006132 ORTHO05D007305 7.8e-11 75.5 137 33.6
MD08G1108900 Malus domestica HOM05D006132 ORTHO05D007305 1.0e-10 75.1 212 28.3
Nitab4.5_0002021g0060 Nicotiana tabacum HOM05D006132 ORTHO05D007305 1.3e-10 74.7 136 34.6
Solyc08g066010.2 Solanum lycopersicum HOM05D006132 ORTHO05D007305 1.3e-10 74.7 132 35.6
Sopen08g019670 Solanum pennellii HOM05D006132 ORTHO05D007305 1.3e-10 74.7 132 35.6
VMungo1309G3161 Vigna mungo HOM05D006132 ORTHO05D007305 1.3e-10 74.7 132 35.6
CSS0029204 Camellia sinensis var. sinensis HOM05D006132 ORTHO05D007305 3.9e-10 73.2 431 24.6
Gohir.D07G023900 Gossypium hirsutum HOM05D006132 ORTHO05D007305 3.3e-09 70.1 167 31.1
Oeu038827.1 Olea europaea HOM05D006132 ORTHO05D007305 5.6e-09 69.3 175 30.9
Rhsim11G0049000 Rhododendron simsii HOM05D006132 ORTHO05D007305 5.6e-09 69.3 379 24.3


User provided reference genes

Program Settings