Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G294 Micromonas commoda HOM05D005310 ORTHO05D006920 1.6e-73 279.3 135 100.0
MELO3C002677.2 Cucumis melo HOM05D005310 ORTHO05D006920 1.1e-24 117.1 129 45.7
EL10Ac8g20559 Beta vulgaris HOM05D005310 ORTHO05D006920 1.4e-24 116.7 126 46.0
AUR62041821 Chenopodium quinoa HOM05D005310 ORTHO05D006920 1.8e-24 116.3 126 45.2
CsaV3_1G033090 Cucumis sativus L. HOM05D005310 ORTHO05D006920 2.4e-24 115.9 129 45.7
Duzib192G0594 Durio zibethinus HOM05D005310 ORTHO05D006920 5.3e-24 114.8 129 45.7
COL.COLO4_31237 Corchorus olitorius HOM05D005310 ORTHO05D006920 6.9e-24 114.4 129 45.0
Gohir.D06G138800 Gossypium hirsutum HOM05D005310 ORTHO05D006920 6.9e-24 114.4 129 43.4
Gohir.A06G133700 Gossypium hirsutum HOM05D005310 ORTHO05D006920 1.2e-23 113.6 129 44.2
Gorai.010G161400 Gossypium raimondii HOM05D005310 ORTHO05D006920 1.2e-23 113.6 129 43.4
Potri.004G061200 Populus trichocarpa HOM05D005310 ORTHO05D006920 1.2e-23 113.6 130 45.4
PRCOL_00002435 Prasinoderma coloniale HOM05D005310 ORTHO05D006920 1.5e-23 113.2 132 46.2
Ah.14g086990 Amaranthus hybridus HOM05D005310 ORTHO05D006920 2.0e-23 112.8 126 43.7
CSS0016268 Camellia sinensis var. sinensis HOM05D005310 ORTHO05D006920 2.0e-23 112.8 129 45.7
SEGI_40960 Sequoiadendron giganteum HOM05D005310 ORTHO05D006920 2.0e-23 112.8 145 43.4
Nn3g21104 Nelumbo nucifera HOM05D005310 ORTHO05D006920 2.6e-23 112.5 129 44.2
Sc05g0006870 Simmondsia chinensis HOM05D005310 ORTHO05D006920 2.6e-23 112.5 126 44.4
Manes.16G042900 Manihot esculenta HOM05D005310 ORTHO05D006920 3.4e-23 112.1 129 44.2
Sabra04G0040500 Salix brachista HOM05D005310 ORTHO05D006920 3.4e-23 112.1 129 44.2
GSVIVG01021256001 Vitis vinifera HOM05D005310 ORTHO05D006920 4.5e-23 111.7 129 42.6
Dinv12753 Davidia involucrata HOM05D005310 ORTHO05D006920 7.6e-23 110.9 129 42.6
Lj4g0024191 Lotus japonicus HOM05D005310 ORTHO05D006920 7.6e-23 110.9 128 43.0
Psat7g068720 Pisum sativum HOM05D005310 ORTHO05D006920 7.6e-23 110.9 129 41.9
Lalb_Chr12g0204951 Lupinus albus HOM05D005310 ORTHO05D006920 9.9e-23 110.5 127 41.7
Thecc.06G165700 Theobroma cacao HOM05D005310 ORTHO05D006920 9.9e-23 110.5 129 44.2
AUR62039478 Chenopodium quinoa HOM05D005310 ORTHO05D006920 1.3e-22 110.2 131 42.0
Peaxi162Scf00202g01112 Petunia axillaris HOM05D005310 ORTHO05D006920 1.3e-22 110.2 129 45.7
Phvul.002G241100 Phaseolus vulgaris HOM05D005310 ORTHO05D006920 1.3e-22 110.2 129 41.9
VMungo0251G0247 Vigna mungo HOM05D005310 ORTHO05D006920 1.3e-22 110.2 129 41.9
FvH4_3g07310 Fragaria vesca HOM05D005310 ORTHO05D006920 1.7e-22 109.8 129 43.4
Medtr8g087310 Medicago truncatula HOM05D005310 ORTHO05D006920 1.7e-22 109.8 129 40.3
TPR.G6733 Trifolium pratense HOM05D005310 ORTHO05D006920 1.7e-22 109.8 129 41.1
FAN11G0629 Fragaria x ananassa HOM05D005310 ORTHO05D006920 2.9e-22 109.0 129 42.6
Glyma.05G161000 Glycine max HOM05D005310 ORTHO05D006920 2.9e-22 109.0 126 42.9
Solyc02g072160.4 Solanum lycopersicum HOM05D005310 ORTHO05D006920 2.9e-22 109.0 129 45.0
ATR0012G016 Amborella trichopoda HOM05D005310 ORTHO05D006920 3.8e-22 108.6 129 43.4
Os02g0234500 Oryza sativa ssp. japonica HOM05D005310 ORTHO05D006920 3.8e-22 108.6 126 42.9
Atru.chr10.1571 Acer truncatum HOM05D005310 ORTHO05D006920 6.4e-22 107.8 129 40.3
CiPaw.09G137200 Carya illinoinensis HOM05D005310 ORTHO05D006920 6.4e-22 107.8 129 41.1
Eucgr.E02785 Eucalyptus grandis HOM05D005310 ORTHO05D006920 6.4e-22 107.8 129 43.4
HPP92_004012 Vanilla planifolia HOM05D005310 ORTHO05D006920 6.4e-22 107.8 126 43.7
PSO210G5690 Papaver somniferum HOM05D005310 ORTHO05D006920 8.4e-22 107.5 129 41.9
PGSC0003DMG400028420 Solanum tuberosum HOM05D005310 ORTHO05D006920 8.4e-22 107.5 129 44.2
HPP92_004025 Vanilla planifolia HOM05D005310 ORTHO05D006920 8.4e-22 107.5 126 43.7
Ciclev10018335m.g Citrus clementina HOM05D005310 ORTHO05D006920 1.1e-21 107.1 134 41.0
Sopen02g021140 Solanum pennellii HOM05D005310 ORTHO05D006920 1.1e-21 107.1 129 44.2
MD00G1009300 Malus domestica HOM05D005310 ORTHO05D006920 1.4e-21 106.7 145 40.0
MD05G1295400 Malus domestica HOM05D005310 ORTHO05D006920 1.4e-21 106.7 145 40.0
TWI53G0456 Tripterygium wilfordii HOM05D005310 ORTHO05D006920 1.4e-21 106.7 129 43.4
CAN.G411.52 Capsicum annuum HOM05D005310 ORTHO05D006920 1.9e-21 106.3 129 44.2
Ca_17897_v3 Cicer arietinum L. HOM05D005310 ORTHO05D006920 1.9e-21 106.3 129 40.3
Sed0028201 Sechium edule HOM05D005310 ORTHO05D006920 1.9e-21 106.3 129 41.9
THA.LOC104806167 Tarenaya hassleriana HOM05D005310 ORTHO05D006920 1.9e-21 106.3 126 41.3
AL7G35440 Arabidopsis lyrata HOM05D005310 ORTHO05D006920 2.4e-21 105.9 145 40.0
AT4G18810 Arabidopsis thaliana HOM05D005310 ORTHO05D006920 2.4e-21 105.9 129 41.9
C01p12850 Brassica napus HOM05D005310 ORTHO05D006920 2.4e-21 105.9 129 42.6
BolC1t01261H Brassica oleracea HOM05D005310 ORTHO05D006920 2.4e-21 105.9 129 42.6
Sp7g17520 Schrenkiella parvula HOM05D005310 ORTHO05D006920 2.4e-21 105.9 145 40.7
Aqoxy1G01994 Aquilegia oxysepala HOM05D005310 ORTHO05D006920 3.2e-21 105.5 126 42.9
A01p10840 Brassica napus HOM05D005310 ORTHO05D006920 3.2e-21 105.5 129 42.6
BraA01t01031Z Brassica rapa HOM05D005310 ORTHO05D006920 3.2e-21 105.5 129 42.6
Hma1.2p1_2416F.1_g321740 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 3.2e-21 105.5 129 40.3
ClCG03G007450 Citrullus lanatus HOM05D005310 ORTHO05D006920 4.2e-21 105.1 130 42.3
Cre05.g244800 Chlamydomonas reinhardtii HOM05D005310 ORTHO05D006920 5.4e-21 104.8 126 42.1
AagrBONN_evm.TU.Sc2ySwM_362.2005 Anthoceros agrestis HOM05D005310 ORTHO05D006920 7.1e-21 104.4 126 39.7
Thhalv10024714m.g Eutrema salsugineum HOM05D005310 ORTHO05D006920 9.3e-21 104.0 129 41.9
PGR042G1369 Punica granatum HOM05D005310 ORTHO05D006920 9.3e-21 104.0 145 40.0
Glyma.08G118400 Glycine max HOM05D005310 ORTHO05D006920 1.2e-20 103.6 129 41.1
vmacro16023 Vaccinium macrocarpon HOM05D005310 ORTHO05D006920 1.2e-20 103.6 157 37.6
Actinidia02744 Actinidia chinensis HOM05D005310 ORTHO05D006920 1.6e-20 103.2 138 39.1
HanXRQChr11g0343901 Helianthus annuus HOM05D005310 ORTHO05D006920 1.6e-20 103.2 145 38.6
Nitab4.5_0005937g0010 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.6e-20 103.2 129 42.6
ECA248G0338 Erigeron canadensis HOM05D005310 ORTHO05D006920 2.1e-20 102.8 145 37.9
Mapoly0037s0097 Marchantia polymorpha HOM05D005310 ORTHO05D006920 2.7e-20 102.4 145 39.3
SMO119G0157 Selaginella moellendorffii HOM05D005310 ORTHO05D006920 2.7e-20 102.4 126 42.1
Carub.0007s2242 Capsella rubella HOM05D005310 ORTHO05D006920 3.5e-20 102.1 145 38.6
Pp3c26_9450 Physcomitrium patens HOM05D005310 ORTHO05D006920 3.5e-20 102.1 126 39.7
Prupe.4G066900 Prunus persica HOM05D005310 ORTHO05D006920 3.5e-20 102.1 145 38.6
CARHR225670 Cardamine hirsuta HOM05D005310 ORTHO05D006920 4.6e-20 101.7 145 38.6
Migut.M01009 Erythranthe guttata HOM05D005310 ORTHO05D006920 4.6e-20 101.7 141 39.7
unitig_0.g743 Utricularia gibba HOM05D005310 ORTHO05D006920 6.0e-20 101.3 116 44.8
Oeu040921.3 Olea europaea HOM05D005310 ORTHO05D006920 7.9e-20 100.9 123 40.7
Aa31LG6G1520 Aethionema arabicum HOM05D005310 ORTHO05D006920 1.3e-19 100.1 145 39.3
Nitab4.5_0000437g0070 Nicotiana tabacum HOM05D005310 ORTHO05D006920 1.8e-19 99.8 129 41.9
QL05p049965 Quercus lobata HOM05D005310 ORTHO05D006920 1.8e-19 99.8 129 38.8
Dinv32339 Davidia involucrata HOM05D005310 ORTHO05D006920 3.0e-19 99.0 124 41.9
FAN16G3592 Fragaria x ananassa HOM05D005310 ORTHO05D006920 3.0e-19 99.0 154 36.4
FAN21G2773 Fragaria x ananassa HOM05D005310 ORTHO05D006920 3.0e-19 99.0 153 36.6
FAN25G3188 Fragaria x ananassa HOM05D005310 ORTHO05D006920 3.9e-19 98.6 153 37.9
CDE04G2110 Ceratophyllum demersum HOM05D005310 ORTHO05D006920 6.7e-19 97.8 125 40.8
Hma1.2p1_2416F.1_g321730 Hydrangea macrophylla HOM05D005310 ORTHO05D006920 1.1e-18 97.1 129 38.0
Cpa.g.sc7.109 Carica papaya HOM05D005310 ORTHO05D006920 4.3e-18 95.1 116 38.8
SGA_v2.0_scaffold16G07714 Striga asiatica HOM05D005310 ORTHO05D006920 4.8e-17 91.7 126 37.3
Lsat_1_v5_gn_1_110100 Lactuca sativa HOM05D005310 ORTHO05D006920 8.1e-17 90.9 129 37.2
Lj1A1175T55 Lonicera japonica HOM05D005310 ORTHO05D006920 3.1e-16 89.0 143 37.1
Rhsim02G0147000 Rhododendron simsii HOM05D005310 ORTHO05D006920 9.0e-16 87.4 114 37.7
arahy.Tifrunner.gnm1.ann1.W2RHW2 Arachis hypogaea HOM05D005310 ORTHO05D006920 5.8e-15 84.7 97 41.2
Cc02_g15590 Coffea canephora HOM05D005310 ORTHO05D006920 1.3e-14 83.6 80 43.8
RcHm_v2.0_Chr2g0109861 Rosa chinensis HOM05D005310 ORTHO05D006920 2.9e-14 82.4 80 43.8
Zm00001eb204900 Zea mays HOM05D005310 ORTHO05D006920 6.4e-14 81.3 96 40.6
RcHm_v2.0_Chr5g0011651 Rosa chinensis HOM05D005310 ORTHO05D006920 8.4e-14 80.9 80 43.8
SalBow8G4237 Salvia bowleyana HOM05D005310 ORTHO05D006920 9.3e-13 77.4 126 34.9
Hund04397 Selenicereus undatus HOM05D005310 ORTHO05D006920 1.6e-12 76.6 126 34.1
DCAR_027984 Daucus carota HOM05D005310 ORTHO05D006920 1.0e-11 73.9 145 34.5
CBR_g23069 Chara braunii HOM05D005310 ORTHO05D006920 3.9e-11 72.0 119 36.1
Cre06.g274650 Chlamydomonas reinhardtii HOM05D005310 ORTHO05D006920 3.9e-11 72.0 127 35.4
Haze_05378 Corylus avellana HOM05D005310 ORTHO05D006920 3.3e-10 68.9 157 29.3
Haze_05354 Corylus avellana HOM05D005310 ORTHO05D006920 4.3e-10 68.6 143 28.7
Cre01.g027850 Chlamydomonas reinhardtii HOM05D005310 ORTHO05D044290 2.8e-09 65.9 126 28.6
RcHm_v2.0_Chr0c19g0500071 Rosa chinensis HOM05D005310 ORTHO05D006920 4.8e-09 65.1 61 45.9
CBR_g48496 Chara braunii HOM05D005310 ORTHO05D006920 8.2e-09 64.3 123 29.3
AL2G32090 Arabidopsis lyrata HOM05D006122 ORTHO05D007426 1.7e-06 56.6 133 27.8
Sp5g27490 Schrenkiella parvula HOM05D006122 ORTHO05D007426 2.2e-06 56.2 137 25.5
Carub.0002s1927 Capsella rubella HOM05D006122 ORTHO05D007426 6.5e-06 54.7 137 25.5


User provided reference genes

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