Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G206 Micromonas commoda HOM05D001127 ORTHO05D268314 0.0e+00 1907.9 974 100.0
Cre10.g459800 Chlamydomonas reinhardtii HOM05D001127 ORTHO05D004677 1.5e-08 66.2 139 34.5
MCO08G275 Micromonas commoda HOM05D001127 ORTHO05D002230 5.9e-08 64.3 167 34.1
THA.LOC104806517 Tarenaya hassleriana HOM05D001127 ORTHO05D002230 7.7e-08 63.9 155 31.6
Cre17.g737050 Chlamydomonas reinhardtii HOM05D001127 ORTHO05D004677 1.7e-07 62.8 235 28.5
Nitab4.5_0008746g0040 Nicotiana tabacum HOM05D001127 ORTHO05D004677 2.9e-07 62.0 144 34.0
Oeu029810.1 Olea europaea HOM05D001127 ORTHO05D004677 2.9e-07 62.0 145 33.1
Nitab4.5_0000130g0190 Nicotiana tabacum HOM05D001127 ORTHO05D004677 3.8e-07 61.6 144 34.0
Potri.006G133400 Populus trichocarpa HOM05D001127 ORTHO05D002230 3.8e-07 61.6 155 31.0
Cc00_g04680 Coffea canephora HOM05D001127 ORTHO05D004677 5.0e-07 61.2 144 33.3
DCAR_012911 Daucus carota HOM05D001127 ORTHO05D004677 5.0e-07 61.2 144 32.6
Duzib106G1380 Durio zibethinus HOM05D001127 ORTHO05D002230 5.0e-07 61.2 146 30.8
Nitab4.5_0007644g0020 Nicotiana tabacum HOM05D001127 ORTHO05D004677 5.0e-07 61.2 143 33.6
Peaxi162Scf00047g01920 Petunia axillaris HOM05D001127 ORTHO05D004677 5.0e-07 61.2 144 32.6
Solyc07g049580.3 Solanum lycopersicum HOM05D001127 ORTHO05D004677 5.0e-07 61.2 144 34.0
Sopen07g024980 Solanum pennellii HOM05D001127 ORTHO05D004677 5.0e-07 61.2 144 34.0
Nitab4.5_0000622g0220 Nicotiana tabacum HOM05D001127 ORTHO05D004677 6.5e-07 60.8 145 31.7
Peaxi162Scf01333g00145 Petunia axillaris HOM05D001127 ORTHO05D004677 6.5e-07 60.8 144 33.3
PGSC0003DMG400006427 Solanum tuberosum HOM05D001127 ORTHO05D004677 6.5e-07 60.8 144 34.0
TWI53G1923 Tripterygium wilfordii HOM05D001127 ORTHO05D002230 6.5e-07 60.8 155 30.3
Sabra06G0104900 Salix brachista HOM05D001127 ORTHO05D002230 8.5e-07 60.5 155 30.3
Sc01g0003680 Simmondsia chinensis HOM05D001127 ORTHO05D002230 8.5e-07 60.5 257 28.0
CAN.G784.6 Capsicum annuum HOM05D001127 ORTHO05D004677 1.1e-06 60.1 144 34.0
Migut.H01294 Erythranthe guttata HOM05D001127 ORTHO05D004677 1.1e-06 60.1 147 34.0
Migut.M00008 Erythranthe guttata HOM05D001127 ORTHO05D004677 1.4e-06 59.7 162 30.9
SalBow7G4161 Salvia bowleyana HOM05D001127 ORTHO05D004677 1.4e-06 59.7 144 32.6
SGA_v2.0_scaffold49G18419 Striga asiatica HOM05D001127 ORTHO05D004677 1.4e-06 59.7 147 33.3
Aa31LG11G7550 Aethionema arabicum HOM05D001127 ORTHO05D004677 1.9e-06 59.3 144 33.3
MSTRG.9190 Avicennia marina HOM05D001127 ORTHO05D002230 1.9e-06 59.3 216 28.2
Ca_06477_v3 Cicer arietinum L. HOM05D001127 ORTHO05D004677 1.9e-06 59.3 144 34.0
TWI18G1165 Tripterygium wilfordii HOM05D001127 ORTHO05D004677 1.9e-06 59.3 143 32.2
Duzib133G0790 Durio zibethinus HOM05D001127 ORTHO05D004677 2.5e-06 58.9 144 33.3
Gohir.A07G189100 Gossypium hirsutum HOM05D001127 ORTHO05D004677 2.5e-06 58.9 144 34.0
Gorai.001G218800 Gossypium raimondii HOM05D001127 ORTHO05D004677 2.5e-06 58.9 144 34.0
Oeu029109.1 Olea europaea HOM05D001127 ORTHO05D002230 2.5e-06 58.9 190 28.9
Solyc12g005930.2 Solanum lycopersicum HOM05D001127 ORTHO05D004677 2.5e-06 58.9 145 31.0
Sopen12g001880 Solanum pennellii HOM05D001127 ORTHO05D004677 2.5e-06 58.9 145 31.0
PGSC0003DMG400013895 Solanum tuberosum HOM05D001127 ORTHO05D004677 2.5e-06 58.9 145 31.0
MSTRG.14934 Avicennia marina HOM05D001127 ORTHO05D004677 3.2e-06 58.5 147 34.0
BraA01t04354Z Brassica rapa HOM05D001127 ORTHO05D004677 3.2e-06 58.5 144 33.3
CDE02G0072 Ceratophyllum demersum HOM05D001127 ORTHO05D002230 3.2e-06 58.5 212 28.3
Lsat_1_v5_gn_1_53421 Lactuca sativa HOM05D001127 ORTHO05D002230 3.2e-06 58.5 190 27.4
TPR.G15072 Trifolium pratense HOM05D001127 ORTHO05D004677 3.2e-06 58.5 144 34.0
EL10Ac7g17259 Beta vulgaris HOM05D001127 ORTHO05D002230 4.2e-06 58.2 146 29.5
Cpa.g.sc132.75 Carica papaya HOM05D001127 ORTHO05D004677 4.2e-06 58.2 144 31.9
Ciclev10011283m.g Citrus clementina HOM05D001127 ORTHO05D002230 4.2e-06 58.2 155 29.0
COL.COLO4_10298 Corchorus olitorius HOM05D001127 ORTHO05D002230 4.2e-06 58.2 155 31.0
COL.COLO4_35989 Corchorus olitorius HOM05D001127 ORTHO05D004677 4.2e-06 58.2 144 33.3
CsaV3_3G035400 Cucumis sativus L. HOM05D001127 ORTHO05D002230 4.2e-06 58.2 155 29.7
MD09G1118900 Malus domestica HOM05D001127 ORTHO05D004677 4.2e-06 58.2 144 33.3
Sed0010697 Sechium edule HOM05D001127 ORTHO05D004677 4.2e-06 58.2 144 32.6
TWI75G1692 Tripterygium wilfordii HOM05D001127 ORTHO05D004677 4.2e-06 58.2 143 32.2
MD17G1109700 Malus domestica HOM05D001127 ORTHO05D004677 5.5e-06 57.8 144 33.3
Medtr5g098140 Medicago truncatula HOM05D001127 ORTHO05D004677 5.5e-06 57.8 144 33.3
Sabra02G0170400 Salix brachista HOM05D001127 ORTHO05D004677 5.5e-06 57.8 144 32.6
Sed0018007 Sechium edule HOM05D001127 ORTHO05D004677 5.5e-06 57.8 162 31.5
Atru.chr8.2522 Acer truncatum HOM05D001127 ORTHO05D002230 7.2e-06 57.4 155 29.7
Aqoxy1G04067 Aquilegia oxysepala HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
BcaB04g21266 Brassica carinata HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
C05p59440 Brassica napus HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
BolC5t34600H Brassica oleracea HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
CAN.G283.4 Capsicum annuum HOM05D001127 ORTHO05D004677 7.2e-06 57.4 145 30.3
Cfa017482 Carpinus fangiana HOM05D001127 ORTHO05D002230 7.2e-06 57.4 155 29.7
CiPaw.09G184300 Carya illinoinensis HOM05D001127 ORTHO05D002230 7.2e-06 57.4 155 30.3
CDE09G1289 Ceratophyllum demersum HOM05D001127 ORTHO05D002230 7.2e-06 57.4 216 28.7
Migut.F02011 Erythranthe guttata HOM05D001127 ORTHO05D002230 7.2e-06 57.4 146 30.8
Eucgr.A01077 Eucalyptus grandis HOM05D001127 ORTHO05D004677 7.2e-06 57.4 162 31.5
Gohir.A07G086000 Gossypium hirsutum HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
Gohir.D07G091100 Gossypium hirsutum HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
Gohir.D07G195480 Gossypium hirsutum HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 33.3
Gorai.001G097600 Gossypium raimondii HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
Oeu046888.2 Olea europaea HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
Os08g0337700 Oryza sativa ssp. japonica HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
SMO119G0184 Selaginella moellendorffii HOM05D001127 ORTHO05D002230 7.2e-06 57.4 146 30.1
VMungo0647G2114 Vigna mungo HOM05D001127 ORTHO05D004677 7.2e-06 57.4 144 32.6
GSVIVG01025565001 Vitis vinifera HOM05D001127 ORTHO05D002230 7.2e-06 57.4 161 28.6
AL3G19260 Arabidopsis lyrata HOM05D001127 ORTHO05D004677 9.4e-06 57.0 200 31.0
BcaC05g29579 Brassica carinata HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
BcaC09g47960 Brassica carinata HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
A03p35540 Brassica napus HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
A05p40350 Brassica napus HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
BraA03t12729Z Brassica rapa HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
Carub.0003s0747 Capsella rubella HOM05D001127 ORTHO05D004677 9.4e-06 57.0 200 31.0
DCAR_021119 Daucus carota HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
Eucgr.A01196 Eucalyptus grandis HOM05D001127 ORTHO05D002230 9.4e-06 57.0 155 29.7
MCO11G755 Micromonas commoda HOM05D001127 ORTHO05D004677 9.4e-06 57.0 145 29.7
RcHm_v2.0_Chr3g0468201 Rosa chinensis HOM05D001127 ORTHO05D002230 9.4e-06 57.0 156 29.5
SGA_v2.0_scaffold329G48854 Striga asiatica HOM05D001127 ORTHO05D002230 9.4e-06 57.0 146 30.1
Thecc.01G186500 Theobroma cacao HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
vmacro12135 Vaccinium macrocarpon HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6
HPP92_019799 Vanilla planifolia HOM05D001127 ORTHO05D002230 9.4e-06 57.0 201 29.4
Zm00001eb176770 Zea mays HOM05D001127 ORTHO05D004677 9.4e-06 57.0 144 32.6


User provided reference genes

Program Settings