Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G112 Micromonas commoda HOM05D006099 ORTHO05D007317 1.8e-173 612.5 303 100.0
Potri.018G001000 Populus trichocarpa HOM05D006099 ORTHO05D007317 1.0e-35 154.8 291 37.5
Medtr1g010130 Medicago truncatula HOM05D006099 ORTHO05D007317 8.7e-35 151.8 291 36.1
FvH4_2g30570 Fragaria vesca HOM05D006099 ORTHO05D007317 1.5e-34 151.0 284 37.0
VMungo0647G0711 Vigna mungo HOM05D006099 ORTHO05D007317 1.5e-34 151.0 290 35.9
AagrBONN_evm.TU.Sc2ySwM_228.1579 Anthoceros agrestis HOM05D006099 ORTHO05D007317 3.3e-34 149.8 290 36.9
Mapoly0013s0098 Marchantia polymorpha HOM05D006099 ORTHO05D007317 4.3e-34 149.4 309 35.3
Phvul.001G057000 Phaseolus vulgaris HOM05D006099 ORTHO05D007317 7.4e-34 148.7 285 36.5
Lj5g0025000 Lotus japonicus HOM05D006099 ORTHO05D007317 9.6e-34 148.3 290 35.9
Sopen12g032140 Solanum pennellii HOM05D006099 ORTHO05D007317 9.6e-34 148.3 290 35.5
CSS0009505 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 1.3e-33 147.9 292 35.6
C03p88160 Brassica napus HOM05D006099 ORTHO05D007317 1.6e-33 147.5 281 37.0
BolC3t21124H Brassica oleracea HOM05D006099 ORTHO05D007317 1.6e-33 147.5 281 37.0
BraA08t33839Z Brassica rapa HOM05D006099 ORTHO05D007317 2.1e-33 147.1 296 36.1
Cfa013234 Carpinus fangiana HOM05D006099 ORTHO05D007317 2.8e-33 146.7 293 35.8
Lalb_Chr24g0402361 Lupinus albus HOM05D006099 ORTHO05D007317 4.8e-33 146.0 294 34.4
Gohir.D05G068900 Gossypium hirsutum HOM05D006099 ORTHO05D007317 8.2e-33 145.2 291 35.1
Gorai.009G069800 Gossypium raimondii HOM05D006099 ORTHO05D007317 8.2e-33 145.2 291 35.1
Solyc12g096280.2 Solanum lycopersicum HOM05D006099 ORTHO05D007317 1.4e-32 144.4 285 35.4
Ca_27927_v3 Cicer arietinum L. HOM05D006099 ORTHO05D007317 1.8e-32 144.1 304 34.5
ECA240G1547 Erigeron canadensis HOM05D006099 ORTHO05D007317 2.4e-32 143.7 282 34.8
AT4G31150 Arabidopsis thaliana HOM05D006099 ORTHO05D007317 3.1e-32 143.3 281 37.0
Gohir.A05G066400 Gossypium hirsutum HOM05D006099 ORTHO05D007317 3.1e-32 143.3 291 35.1
THA.LOC104803891 Tarenaya hassleriana HOM05D006099 ORTHO05D007317 3.1e-32 143.3 282 37.6
AL7G20920 Arabidopsis lyrata HOM05D006099 ORTHO05D007317 4.0e-32 142.9 281 36.7
CANSAT25G1623 Cannabis sativa HOM05D006099 ORTHO05D007317 4.0e-32 142.9 290 34.1
Carub.0007s0938 Capsella rubella HOM05D006099 ORTHO05D007317 4.0e-32 142.9 281 36.3
CiPaw.07G216100 Carya illinoinensis HOM05D006099 ORTHO05D007317 5.3e-32 142.5 275 37.1
Dinv37480 Davidia involucrata HOM05D006099 ORTHO05D007317 1.5e-31 141.0 287 36.2
Nn4g25135 Nelumbo nucifera HOM05D006099 ORTHO05D007317 1.5e-31 141.0 282 35.5
CAN.G947.18 Capsicum annuum HOM05D006099 ORTHO05D007317 2.0e-31 140.6 284 35.9
Cc00_g12770 Coffea canephora HOM05D006099 ORTHO05D007317 2.0e-31 140.6 294 35.4
Zm00001eb274410 Zea mays HOM05D006099 ORTHO05D007317 2.0e-31 140.6 291 35.1
HanXRQChr13g0419861 Helianthus annuus HOM05D006099 ORTHO05D007317 2.6e-31 140.2 289 36.0
Sp7g29030 Schrenkiella parvula HOM05D006099 ORTHO05D007317 3.4e-31 139.8 281 36.7
Thhalv10025966m.g Eutrema salsugineum HOM05D006099 ORTHO05D007317 4.5e-31 139.4 281 36.3
Manes.15G141100 Manihot esculenta HOM05D006099 ORTHO05D007317 7.6e-31 138.7 288 33.7
Actinidia03572 Actinidia chinensis HOM05D006099 ORTHO05D007317 1.7e-30 137.5 288 34.7
Ciclev10009104m.g Citrus clementina HOM05D006099 ORTHO05D007317 1.7e-30 137.5 295 34.2
Hma1.2p1_1615F.1_g293710 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 1.7e-30 137.5 270 34.1
Rhsim07G0173500 Rhododendron simsii HOM05D006099 ORTHO05D007317 2.2e-30 137.1 313 33.5
Sed0006978 Sechium edule HOM05D006099 ORTHO05D007317 2.9e-30 136.7 286 36.7
GSVIVG01035588001 Vitis vinifera HOM05D006099 ORTHO05D007317 2.9e-30 136.7 292 34.2
arahy.Tifrunner.gnm1.ann1.AEW87R Arachis hypogaea HOM05D006099 ORTHO05D007317 3.8e-30 136.3 309 34.3
Manes.15G141200 Manihot esculenta HOM05D006099 ORTHO05D007317 3.8e-30 136.3 286 35.0
A08p18780 Brassica napus HOM05D006099 ORTHO05D007317 6.5e-30 135.6 320 33.8
Glyma.14G131200 Glycine max HOM05D006099 ORTHO05D007317 6.5e-30 135.6 277 34.3
Lsat_1_v5_gn_3_111601 Lactuca sativa HOM05D006099 ORTHO05D007317 6.5e-30 135.6 280 34.6
Pp3c6_10670 Physcomitrium patens HOM05D006099 ORTHO05D007317 6.5e-30 135.6 289 32.9
Aa31LG2G19160 Aethionema arabicum HOM05D006099 ORTHO05D007317 1.1e-29 134.8 282 34.0
MD08G1132300 Malus domestica HOM05D006099 ORTHO05D007317 1.4e-29 134.4 288 33.7
SMO351G0465 Selaginella moellendorffii HOM05D006099 ORTHO05D007317 2.5e-29 133.7 247 36.4
ATR0626G128 Amborella trichopoda HOM05D006099 ORTHO05D007317 4.2e-29 132.9 280 34.3
ClCG08G012820 Citrullus lanatus HOM05D006099 ORTHO05D007317 5.5e-29 132.5 298 34.9
CsaV3_2G031500 Cucumis sativus L. HOM05D006099 ORTHO05D007317 5.5e-29 132.5 286 36.0
Nitab4.5_0001159g0110 Nicotiana tabacum HOM05D006099 ORTHO05D007317 1.2e-28 131.3 313 34.2
QL12p030693 Quercus lobata HOM05D006099 ORTHO05D007317 1.6e-28 131.0 248 37.9
Atru.chr7.2710 Acer truncatum HOM05D006099 ORTHO05D007317 6.0e-28 129.0 294 32.7
Lj7A751T33 Lonicera japonica HOM05D006099 ORTHO05D007317 6.0e-28 129.0 296 32.4
Duzib168G0660 Durio zibethinus HOM05D006099 ORTHO05D007317 1.3e-27 127.9 307 34.2
CBR_g34340 Chara braunii HOM05D006099 ORTHO05D007317 1.8e-27 127.5 245 38.0
Thecc.09G001300 Theobroma cacao HOM05D006099 ORTHO05D007317 1.8e-27 127.5 257 35.8
PGSC0003DMG400029284 Solanum tuberosum HOM05D006099 ORTHO05D007317 2.3e-27 127.1 280 33.9
BcaB03g12683 Brassica carinata HOM05D006099 ORTHO05D007317 3.0e-27 126.7 258 34.9
arahy.Tifrunner.gnm1.ann1.ZJIP4K Arachis hypogaea HOM05D006099 ORTHO05D007317 3.9e-27 126.3 279 34.4
FAN15G2948 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.9e-27 126.3 298 32.2
FAN27G0146 Fragaria x ananassa HOM05D006099 ORTHO05D007317 3.9e-27 126.3 302 32.8
Oeu035175.2 Olea europaea HOM05D006099 ORTHO05D007317 8.7e-27 125.2 242 36.8
PGR142G3206 Punica granatum HOM05D006099 ORTHO05D007317 8.7e-27 125.2 299 32.4
QL12p030880 Quercus lobata HOM05D006099 ORTHO05D007317 8.7e-27 125.2 237 37.6
AUR62020668 Chenopodium quinoa HOM05D006099 ORTHO05D007317 2.5e-26 123.6 298 32.6
MELO3C011207.2 Cucumis melo HOM05D006099 ORTHO05D007317 4.3e-26 122.9 282 34.4
PSO170G3285 Papaver somniferum HOM05D006099 ORTHO05D007317 5.7e-26 122.5 248 33.5
Sabra18G0005300 Salix brachista HOM05D002037 ORTHO05D002762 7.4e-26 122.1 302 34.8
Cpa.g.sc148.13 Carica papaya HOM05D006099 ORTHO05D007317 2.4e-24 117.1 188 35.1
Sc23g0004430 Simmondsia chinensis HOM05D006099 ORTHO05D007317 2.0e-23 114.0 308 32.5
Haze_21663 Corylus avellana HOM05D006099 ORTHO05D007317 3.4e-23 113.2 278 33.1
SGA_v2.0_scaffold27G11694 Striga asiatica HOM05D006099 ORTHO05D007317 7.6e-23 112.1 297 31.0
Hund03250 Selenicereus undatus HOM05D006099 ORTHO05D007317 1.3e-22 111.3 168 36.9
Os06g0663600 Oryza sativa ssp. japonica HOM05D006099 ORTHO05D007317 1.7e-22 110.9 162 37.0
CSS0007227 Camellia sinensis var. sinensis HOM05D006099 ORTHO05D007317 2.2e-22 110.5 180 35.0
Hma1.2p1_1615F.1_g293700 Hydrangea macrophylla HOM05D006099 ORTHO05D007317 6.5e-22 109.0 177 35.0
RcHm_v2.0_Chr6g0312441 Rosa chinensis HOM05D006099 ORTHO05D007317 8.5e-22 108.6 278 32.4
Eucgr.C02144 Eucalyptus grandis HOM05D006099 ORTHO05D007317 1.1e-21 108.2 282 31.9
PSO063G7181 Papaver somniferum HOM05D006099 ORTHO05D007317 1.1e-21 108.2 236 34.3
HPP92_011639 Vanilla planifolia HOM05D006099 ORTHO05D007317 1.1e-21 108.2 162 38.3
TWI32G0633 Tripterygium wilfordii HOM05D006099 ORTHO05D007317 4.2e-21 106.3 232 32.3
Zm00001eb274500 Zea mays HOM05D006099 ORTHO05D007317 2.1e-20 104.0 171 35.7
FAN24G0140 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.4e-19 101.3 238 34.0
EL10Ac2g03669 Beta vulgaris HOM05D006099 ORTHO05D007317 3.9e-19 99.8 277 30.7
HanXRQChr13g0419831 Helianthus annuus HOM05D006099 ORTHO05D007317 5.1e-19 99.4 180 39.4
Zm00001eb274550 Zea mays HOM05D006099 ORTHO05D007317 8.8e-19 98.6 126 39.7
Ah.11g044160 Amaranthus hybridus HOM05D006099 ORTHO05D007317 1.1e-18 98.2 183 37.2
Zm00001eb442290 Zea mays HOM05D006099 ORTHO05D007317 1.5e-18 97.8 126 38.9
DCAR_000694 Daucus carota HOM05D006099 ORTHO05D007317 2.5e-18 97.1 281 31.7
Cre07.g346100 Chlamydomonas reinhardtii HOM05D006099 ORTHO05D007317 7.4e-18 95.5 297 33.0
SalBow4G2099 Salvia bowleyana HOM05D006099 ORTHO05D007317 4.8e-17 92.8 238 31.1
CDE06G2693 Ceratophyllum demersum HOM05D006099 ORTHO05D007317 3.8e-14 83.2 156 36.5
unitig_32.g10951 Utricularia gibba HOM05D006099 ORTHO05D007317 8.5e-14 82.0 160 36.2
BolC6t36631H Brassica oleracea HOM05D006099 ORTHO05D007317 2.5e-13 80.5 138 34.1
BcaC08g44050 Brassica carinata HOM05D006099 ORTHO05D007317 5.5e-13 79.3 138 34.1
AUR62028064 Chenopodium quinoa HOM05D006099 ORTHO05D007317 1.6e-12 77.8 411 23.4
BcaC04g20481 Brassica carinata HOM05D006099 ORTHO05D007317 3.6e-12 76.6 138 33.3
C09p43040 Brassica napus HOM05D006099 ORTHO05D007317 3.6e-12 76.6 138 33.3
Psat6g031520 Pisum sativum HOM05D006099 ORTHO05D007317 3.6e-12 76.6 141 34.0
C03p41630 Brassica napus HOM05D006099 ORTHO05D007317 1.8e-11 74.3 132 34.1
vmacro05090 Vaccinium macrocarpon HOM05D006099 ORTHO05D007317 3.3e-10 70.1 148 30.4
HPP92_011638 Vanilla planifolia HOM05D006099 ORTHO05D007317 2.2e-09 67.4 46 60.9
Migut.A00464 Erythranthe guttata HOM05D006099 ORTHO05D007317 1.1e-08 65.1 170 28.8
RcHm_v2.0_Chr6g0312501 Rosa chinensis HOM05D006099 ORTHO05D007317 1.1e-08 65.1 221 29.9
CARHR239060 Cardamine hirsuta HOM05D006099 ORTHO05D007317 1.4e-08 64.7 144 36.8
Prupe.1G463600 Prunus persica HOM05D006099 ORTHO05D007317 1.4e-08 64.7 120 33.3
MBI16_g00820_MAGBIO Magnolia biondii HOM05D006099 ORTHO05D007317 1.8e-08 64.3 269 24.2
Sc23g0004790 Simmondsia chinensis HOM05D006099 ORTHO05D007317 4.1e-08 63.2 102 37.3
TPR.G3995 Trifolium pratense HOM05D006099 ORTHO05D007317 1.5e-07 61.2 46 52.2
Nitab4.5_0001327g0030 Nicotiana tabacum HOM05D006099 ORTHO05D007317 2.6e-07 60.5 153 34.6
FAN20G1258 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.3e-06 58.2 301 26.9
FAN20G1767 Fragaria x ananassa HOM05D006099 ORTHO05D007317 1.3e-06 58.2 301 26.9


User provided reference genes

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