Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G111 Micromonas commoda HOM05D000300 ORTHO05D008505 1.3e-140 503.4 337 100.0
MSTRG.6839 Avicennia marina HOM05D000300 ORTHO05D008505 1.0e-23 115.2 169 39.6
Os04g0530300 Oryza sativa ssp. japonica HOM05D000300 ORTHO05D008505 1.5e-22 111.3 173 39.3
THA.LOC104813391 Tarenaya hassleriana HOM05D000300 ORTHO05D008505 1.5e-22 111.3 177 37.9
CsaV3_3G006220 Cucumis sativus L. HOM05D000300 ORTHO05D008505 2.5e-22 110.5 171 38.0
PGSC0003DMG400015358 Solanum tuberosum HOM05D000300 ORTHO05D008505 2.5e-22 110.5 171 38.6
MELO3C016520.2 Cucumis melo HOM05D000300 ORTHO05D008505 3.2e-22 110.2 171 38.0
ClCG10G006870 Citrullus lanatus HOM05D000300 ORTHO05D008505 4.2e-22 109.8 171 38.0
Cc05_g12170 Coffea canephora HOM05D000300 ORTHO05D000383 4.2e-22 109.8 164 40.2
Gohir.A04G028900 Gossypium hirsutum HOM05D000300 ORTHO05D008505 5.5e-22 109.4 175 37.7
Gohir.D05G358300 Gossypium hirsutum HOM05D000300 ORTHO05D008505 5.5e-22 109.4 175 37.7
AagrBONN_evm.TU.Sc2ySwM_340.171 Anthoceros agrestis HOM05D000300 ORTHO05D008505 7.2e-22 109.0 171 39.2
Cre03.g176050 Chlamydomonas reinhardtii HOM05D000300 ORTHO05D008505 7.2e-22 109.0 167 43.1
Gorai.009G390800 Gossypium raimondii HOM05D000300 ORTHO05D008505 7.2e-22 109.0 175 37.7
SalBow7G1295 Salvia bowleyana HOM05D000300 ORTHO05D008505 7.2e-22 109.0 175 37.7
SalBow7G3546 Salvia bowleyana HOM05D000300 ORTHO05D008505 7.2e-22 109.0 175 37.7
Nn1g06576 Nelumbo nucifera HOM05D000300 ORTHO05D008505 9.4e-22 108.6 176 38.1
Oeu060546.1 Olea europaea HOM05D000300 ORTHO05D008505 9.4e-22 108.6 171 39.2
Glyma.13G278100 Glycine max HOM05D000300 ORTHO05D008505 1.2e-21 108.2 172 37.8
GSVIVG01014363001 Vitis vinifera HOM05D000300 ORTHO05D000383 1.2e-21 108.2 171 38.6
Migut.M00819 Erythranthe guttata HOM05D000300 ORTHO05D008505 1.6e-21 107.8 171 38.6
Sabra11G0105000 Salix brachista HOM05D000300 ORTHO05D008505 1.6e-21 107.8 170 38.8
SEGI_35024 Sequoiadendron giganteum HOM05D000300 ORTHO05D008505 1.6e-21 107.8 175 38.9
TWI38G1039 Tripterygium wilfordii HOM05D000300 ORTHO05D008505 1.6e-21 107.8 171 37.4
Atru.chr2.2664 Acer truncatum HOM05D000300 ORTHO05D008505 2.1e-21 107.5 176 39.8
CiPaw.11G167900 Carya illinoinensis HOM05D000300 ORTHO05D008505 2.1e-21 107.5 164 39.0
Duzib213G0972 Durio zibethinus HOM05D000300 ORTHO05D008505 2.7e-21 107.1 171 38.0
ECA240G3136 Erigeron canadensis HOM05D000300 ORTHO05D008505 2.7e-21 107.1 171 36.8
PSO541G3772 Papaver somniferum HOM05D000300 ORTHO05D008505 2.7e-21 107.1 176 37.5
Potri.011G121000 Populus trichocarpa HOM05D000300 ORTHO05D008505 2.7e-21 107.1 172 37.2
Thecc.07G080900 Theobroma cacao HOM05D000300 ORTHO05D008505 2.7e-21 107.1 171 38.6
Manes.03G111900 Manihot esculenta HOM05D000300 ORTHO05D008505 3.6e-21 106.7 169 37.3
BcaB08g35739 Brassica carinata HOM05D000300 ORTHO05D008505 4.7e-21 106.3 178 38.2
Peaxi162Scf00000g00412 Petunia axillaris HOM05D000300 ORTHO05D008505 4.7e-21 106.3 169 37.9
AL8G28840 Arabidopsis lyrata HOM05D000300 ORTHO05D008505 6.1e-21 105.9 178 38.8
AT5G53800 Arabidopsis thaliana HOM05D000300 ORTHO05D008505 6.1e-21 105.9 178 38.8
Thhalv10013922m.g Eutrema salsugineum HOM05D000300 ORTHO05D008505 6.1e-21 105.9 178 37.6
Sp6g15870 Schrenkiella parvula HOM05D000300 ORTHO05D008505 6.1e-21 105.9 176 38.1
Aqoxy1G02483 Aquilegia oxysepala HOM05D000300 ORTHO05D008505 8.0e-21 105.5 175 36.0
BcaC04g20418 Brassica carinata HOM05D000300 ORTHO05D008505 1.0e-20 105.1 178 37.6
A10p11170 Brassica napus HOM05D000300 ORTHO05D008505 1.0e-20 105.1 178 37.6
C09p43740 Brassica napus HOM05D000300 ORTHO05D008505 1.0e-20 105.1 178 37.6
BolC9t57259H Brassica oleracea HOM05D000300 ORTHO05D008505 1.0e-20 105.1 178 37.6
BraA10t43209Z Brassica rapa HOM05D000300 ORTHO05D008505 1.0e-20 105.1 178 37.6
Carub.0008s1409 Capsella rubella HOM05D000300 ORTHO05D008505 1.0e-20 105.1 178 37.6
Mapoly0026s0140 Marchantia polymorpha HOM05D000300 ORTHO05D008505 1.0e-20 105.1 171 37.4
PSO675G9140 Papaver somniferum HOM05D000300 ORTHO05D008505 1.0e-20 105.1 176 36.9
Cpa.g.sc80.49 Carica papaya HOM05D000300 ORTHO05D008505 1.4e-20 104.8 167 37.7
Ciclev10007647m.g Citrus clementina HOM05D000300 ORTHO05D000383 1.4e-20 104.8 171 37.4
Glyma.12G223300 Glycine max HOM05D000300 ORTHO05D008505 1.4e-20 104.8 171 36.8
Hma1.2p1_1618F.1_g293900 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 1.4e-20 104.8 171 36.8
TPR.G38968 Trifolium pratense HOM05D000300 ORTHO05D008505 1.4e-20 104.8 171 38.0
VMungo1080G0699 Vigna mungo HOM05D000300 ORTHO05D008505 1.4e-20 104.8 171 36.8
Dinv04313 Davidia involucrata HOM05D000300 ORTHO05D008505 1.8e-20 104.4 174 36.8
Phvul.005G071500 Phaseolus vulgaris HOM05D000300 ORTHO05D008505 1.8e-20 104.4 171 36.8
Psat3g101080 Pisum sativum HOM05D000300 ORTHO05D008505 2.3e-20 104.0 171 37.4
QL08p020830 Quercus lobata HOM05D000300 ORTHO05D008505 2.3e-20 104.0 171 36.8
vmacro11851 Vaccinium macrocarpon HOM05D000300 ORTHO05D008505 3.0e-20 103.6 180 36.1
arahy.Tifrunner.gnm1.ann1.UT5NS3 Arachis hypogaea HOM05D000300 ORTHO05D008505 5.2e-20 102.8 171 36.8
arahy.Tifrunner.gnm1.ann1.Z7GNQ3 Arachis hypogaea HOM05D000300 ORTHO05D008505 5.2e-20 102.8 171 36.8
Lj3g0005060 Lotus japonicus HOM05D000300 ORTHO05D008505 5.2e-20 102.8 171 37.4
Prupe.4G183600 Prunus persica HOM05D000300 ORTHO05D008505 5.2e-20 102.8 171 36.8
CANSAT56G2812 Cannabis sativa HOM05D000300 ORTHO05D008505 6.7e-20 102.4 171 37.4
MD11G1245300 Malus domestica HOM05D000300 ORTHO05D008505 6.7e-20 102.4 169 37.3
CSS0002162 Camellia sinensis var. sinensis HOM05D000300 ORTHO05D008505 1.1e-19 101.7 174 37.4
Lalb_Chr20g0109791 Lupinus albus HOM05D000300 ORTHO05D008505 1.1e-19 101.7 171 37.4
RcHm_v2.0_Chr5g0033901 Rosa chinensis HOM05D000300 ORTHO05D008505 1.1e-19 101.7 171 36.8
MD03G1225800 Malus domestica HOM05D000300 ORTHO05D008505 2.0e-19 100.9 169 36.7
Medtr2g079460 Medicago truncatula HOM05D000300 ORTHO05D008505 2.0e-19 100.9 171 36.8
SMO367G0821 Selaginella moellendorffii HOM05D000300 ORTHO05D008505 2.0e-19 100.9 152 38.8
Pp3c25_13690 Physcomitrium patens HOM05D000300 ORTHO05D008505 4.4e-19 99.8 177 35.6
Zm00001eb075780 Zea mays HOM05D000300 ORTHO05D008505 4.4e-19 99.8 168 36.9
Aa31LG3G10120 Aethionema arabicum HOM05D000300 ORTHO05D008505 5.7e-19 99.4 202 35.6
FvH4_3g20100 Fragaria vesca HOM05D000300 ORTHO05D008505 7.5e-19 99.0 174 36.2
FAN11G2262 Fragaria x ananassa HOM05D000300 ORTHO05D008505 7.5e-19 99.0 171 36.3
PGR031G2267 Punica granatum HOM05D000300 ORTHO05D008505 7.5e-19 99.0 169 34.9
Lsat_1_v5_gn_9_97040 Lactuca sativa HOM05D000300 ORTHO05D008505 9.7e-19 98.6 173 35.8
FAN21G2789 Fragaria x ananassa HOM05D000300 ORTHO05D008505 1.3e-18 98.2 171 36.8
HPP92_025994 Vanilla planifolia HOM05D000300 ORTHO05D008505 2.2e-18 97.4 171 36.8
ATR0680G062 Amborella trichopoda HOM05D000300 ORTHO05D008505 3.7e-18 96.7 176 35.8
DCAR_013093 Daucus carota HOM05D000300 ORTHO05D008505 1.4e-17 94.7 164 36.0
unitig_747.g21571 Utricularia gibba HOM05D000300 ORTHO05D008505 1.8e-17 94.4 159 36.5
Haze_09412 Corylus avellana HOM05D000300 ORTHO05D008505 2.4e-17 94.0 163 36.8
Solyc12g013790.3 Solanum lycopersicum HOM05D000300 ORTHO05D008505 5.3e-17 92.8 171 33.9
Sopen12g007100 Solanum pennellii HOM05D000300 ORTHO05D008505 5.3e-17 92.8 171 33.9
Ca_01834_v3 Cicer arietinum L. HOM05D000300 ORTHO05D008505 7.0e-17 92.4 150 37.3
Rhsim06G0197200 Rhododendron simsii HOM05D000300 ORTHO05D008505 1.2e-16 91.7 153 37.3
Sc16g0006940 Simmondsia chinensis HOM05D000300 ORTHO05D008505 2.0e-16 90.9 110 44.5
SGA_v2.0_scaffold34G13828 Striga asiatica HOM05D000300 ORTHO05D008505 2.0e-16 90.9 207 33.3
Nitab4.5_0007374g0020 Nicotiana tabacum HOM05D000300 ORTHO05D008505 1.0e-15 88.6 218 32.1
HanXRQChr03g0078531 Helianthus annuus HOM05D000300 ORTHO05D008505 5.0e-15 86.3 159 35.2
CDE02G0965 Ceratophyllum demersum HOM05D000300 ORTHO05D008505 1.1e-14 85.1 171 31.6
CDE01G0218 Ceratophyllum demersum HOM05D005098 ORTHO05D006646 1.2e-13 81.6 129 36.4
MD11G1245600 Malus domestica HOM05D000300 ORTHO05D008505 1.2e-13 81.6 152 34.2
Hma1.2p1_1738F.1_g299980 Hydrangea macrophylla HOM05D000300 ORTHO05D008505 2.1e-13 80.9 171 31.6
Sed0021435 Sechium edule HOM05D000300 ORTHO05D008505 2.7e-13 80.5 169 33.7
Hund02219 Selenicereus undatus HOM05D000300 ORTHO05D008505 1.0e-12 78.6 169 34.9
CBR_g12199 Chara braunii HOM05D000300 ORTHO05D008505 1.4e-12 78.2 64 57.8
Actinidia12817 Actinidia chinensis HOM05D000300 ORTHO05D008505 3.0e-12 77.0 70 51.4
Ah.04g164930 Amaranthus hybridus HOM05D000300 ORTHO05D008505 5.7e-11 72.8 169 31.4
Nitab4.5_0000662g0230 Nicotiana tabacum HOM05D000300 ORTHO05D008505 2.8e-10 70.5 190 29.5
FAN25G2371 Fragaria x ananassa HOM05D000300 ORTHO05D008505 3.7e-10 70.1 58 53.4
MD11G1132100 Malus domestica HOM05D000300 ORTHO05D008505 1.2e-08 65.1 68 47.1
Nn1g04059 Nelumbo nucifera HOM05D000300 ORTHO05D008505 3.2e-06 57.0 79 40.5


User provided reference genes

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