Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G106 Micromonas commoda HOM05D001106 ORTHO05D000910 1.7e-282 975.3 499 100.0
PRCOL_00000901 Prasinoderma coloniale HOM05D000578 ORTHO05D000422 2.7e-17 94.4 355 33.0
Zm00001eb233790 Zea mays HOM05D001051 ORTHO05D000886 1.9e-10 71.6 320 29.4
AUR62030486 Chenopodium quinoa HOM05D001106 ORTHO05D000910 8.8e-08 62.8 414 25.6
Peaxi162Scf00015g00927 Petunia axillaris HOM05D001106 ORTHO05D000910 2.0e-07 61.6 87 39.1
BcaC03g14961 Brassica carinata HOM05D001106 ORTHO05D000910 2.6e-07 61.2 92 37.0
C02p24810 Brassica napus HOM05D001106 ORTHO05D000910 2.6e-07 61.2 92 37.0
BolC2t08572H Brassica oleracea HOM05D001106 ORTHO05D000910 2.6e-07 61.2 92 37.0
CiPaw.15G085100 Carya illinoinensis HOM05D001106 ORTHO05D000910 2.6e-07 61.2 78 39.7
A08p26980 Brassica napus HOM05D001106 ORTHO05D000910 3.3e-07 60.8 103 34.0
FvH4_5g12150 Fragaria vesca HOM05D001106 ORTHO05D000910 4.4e-07 60.5 83 38.6
FAN04G2513 Fragaria x ananassa HOM05D001106 ORTHO05D000910 4.4e-07 60.5 82 39.0
FAN08G2620 Fragaria x ananassa HOM05D001106 ORTHO05D000910 4.4e-07 60.5 83 38.6
FAN13G0527 Fragaria x ananassa HOM05D001106 ORTHO05D000910 4.4e-07 60.5 83 38.6
FAN18G2509 Fragaria x ananassa HOM05D001106 ORTHO05D000910 4.4e-07 60.5 83 38.6
FAN18G3399 Fragaria x ananassa HOM05D001106 ORTHO05D000910 4.4e-07 60.5 83 38.6
Nitab4.5_0009734g0010 Nicotiana tabacum HOM05D001106 ORTHO05D000910 4.4e-07 60.5 84 36.9
Hund18947 Selenicereus undatus HOM05D000932 ORTHO05D000729 4.4e-07 60.5 103 43.7
A02p15110 Brassica napus HOM05D001106 ORTHO05D000910 5.7e-07 60.1 92 35.9
Sp5g23590 Schrenkiella parvula HOM05D001106 ORTHO05D000910 5.7e-07 60.1 92 35.9
BraA02t06577Z Brassica rapa HOM05D001106 ORTHO05D000910 7.4e-07 59.7 92 35.9
CANSAT01G3252 Cannabis sativa HOM05D001106 ORTHO05D000910 7.4e-07 59.7 44 52.3
Ca_11174_v3 Cicer arietinum L. HOM05D001106 ORTHO05D000910 9.7e-07 59.3 44 52.3
Manes.05G137600 Manihot esculenta HOM05D001106 ORTHO05D000910 9.7e-07 59.3 44 52.3
Oeu050163.1 Olea europaea HOM05D001106 ORTHO05D000910 9.7e-07 59.3 76 38.2
Pp3c2_31580 Physcomitrium patens HOM05D001051 ORTHO05D000886 1.3e-06 58.9 41 58.5
Lalb_Chr21g0308941 Lupinus albus HOM05D001106 ORTHO05D000910 1.7e-06 58.5 44 52.3
Manes.01G012000 Manihot esculenta HOM05D001106 ORTHO05D000910 1.7e-06 58.5 51 47.1
Nitab4.5_0000974g0020 Nicotiana tabacum HOM05D001106 ORTHO05D000910 1.7e-06 58.5 84 36.9
Os09g0240200 Oryza sativa ssp. japonica HOM05D001051 ORTHO05D000886 1.7e-06 58.5 317 30.0
Psat3g193520 Pisum sativum HOM05D001051 ORTHO05D000886 1.7e-06 58.5 42 57.1
Sabra10G0095000 Salix brachista HOM05D001106 ORTHO05D000910 1.7e-06 58.5 76 36.8
AUR62035221 Chenopodium quinoa HOM05D001106 ORTHO05D000910 2.2e-06 58.2 339 26.3
DCAR_026289 Daucus carota HOM05D001051 ORTHO05D000886 2.2e-06 58.2 58 46.6
Eucgr.G02322 Eucalyptus grandis HOM05D001106 ORTHO05D000910 2.2e-06 58.2 44 52.3
FvH4_4g08980 Fragaria vesca HOM05D001051 ORTHO05D000886 2.2e-06 58.2 41 58.5
FAN22G1203 Fragaria x ananassa HOM05D001051 ORTHO05D000886 2.2e-06 58.2 41 58.5
Nitab4.5_0000057g0280 Nicotiana tabacum HOM05D001106 ORTHO05D000910 2.2e-06 58.2 78 37.2
Solyc03g119540.3 Solanum lycopersicum HOM05D001106 ORTHO05D000910 2.2e-06 58.2 79 39.2
Sopen03g038370 Solanum pennellii HOM05D001106 ORTHO05D000910 2.2e-06 58.2 79 39.2
Aqoxy3G00303 Aquilegia oxysepala HOM05D001106 ORTHO05D000910 2.8e-06 57.8 78 37.2
arahy.Tifrunner.gnm1.ann1.669CET Arachis hypogaea HOM05D001051 ORTHO05D000886 2.8e-06 57.8 41 58.5
arahy.Tifrunner.gnm1.ann1.S3IANQ Arachis hypogaea HOM05D001051 ORTHO05D000886 2.8e-06 57.8 41 58.5
CANSAT80G0543 Cannabis sativa HOM05D001106 ORTHO05D000910 2.8e-06 57.8 44 52.3
CANSAT80G0980 Cannabis sativa HOM05D001106 ORTHO05D000910 2.8e-06 57.8 44 52.3
COL.COLO4_05971 Corchorus olitorius HOM05D001106 ORTHO05D000910 2.8e-06 57.8 105 35.2
CsaV3_5G034320 Cucumis sativus L. HOM05D001106 ORTHO05D000910 2.8e-06 57.8 88 33.0
Migut.L01064 Erythranthe guttata HOM05D001106 ORTHO05D000910 2.8e-06 57.8 44 52.3
FAN17G2373 Fragaria x ananassa HOM05D001051 ORTHO05D000886 2.8e-06 57.8 41 58.5
Pp3c18_13350 Physcomitrium patens HOM05D001106 ORTHO05D000910 2.8e-06 57.8 41 56.1
Pp3c8_1870 Physcomitrium patens HOM05D001106 ORTHO05D000910 2.8e-06 57.8 41 53.7
QL01p042619 Quercus lobata HOM05D001106 ORTHO05D000910 2.8e-06 57.8 77 36.4
Rhsim12G0143500 Rhododendron simsii HOM05D001106 ORTHO05D000910 2.8e-06 57.8 49 46.9
Solyc04g007210.3 Solanum lycopersicum HOM05D001106 ORTHO05D000910 2.8e-06 57.8 44 52.3
BraA08t34644Z Brassica rapa HOM05D001106 ORTHO05D000910 3.7e-06 57.4 103 33.0
CAN.G438.137 Capsicum annuum HOM05D001106 ORTHO05D000910 3.7e-06 57.4 79 38.0
Cre03.g182700 Chlamydomonas reinhardtii HOM05D001051 ORTHO05D000886 3.7e-06 57.4 44 50.0
ClCG07G016220 Citrullus lanatus HOM05D001051 ORTHO05D000886 3.7e-06 57.4 44 56.8
ECA246G3575 Erigeron canadensis HOM05D001106 ORTHO05D000037 3.7e-06 57.4 44 52.3
Hma1.2p1_0061F.1_g033920 Hydrangea macrophylla HOM05D001106 ORTHO05D000910 3.7e-06 57.4 44 52.3
Medtr1g110870 Medicago truncatula HOM05D001106 ORTHO05D000910 3.7e-06 57.4 44 50.0
Nn8g40382 Nelumbo nucifera HOM05D001051 ORTHO05D000886 3.7e-06 57.4 41 56.1
Phvul.011G069800 Phaseolus vulgaris HOM05D000932 ORTHO05D000729 3.7e-06 57.4 57 54.4
Potri.010G125100 Populus trichocarpa HOM05D001106 ORTHO05D000910 3.7e-06 57.4 78 35.9
QL08p043651 Quercus lobata HOM05D000578 ORTHO05D000422 3.7e-06 57.4 53 47.2
BcaB03g14046 Brassica carinata HOM05D001106 ORTHO05D000910 4.8e-06 57.0 65 41.5
BcaC04g18929 Brassica carinata HOM05D001051 ORTHO05D000886 4.8e-06 57.0 44 50.0
BolC9t58962H Brassica oleracea HOM05D001051 ORTHO05D000886 4.8e-06 57.0 44 50.0
CSS0037269 Camellia sinensis var. sinensis HOM05D001051 ORTHO05D000886 4.8e-06 57.0 43 51.2
Cpa.g.sc3.516 Carica papaya HOM05D001106 ORTHO05D000910 4.8e-06 57.0 49 46.9
CDE02G1963 Ceratophyllum demersum HOM05D001051 ORTHO05D000886 4.8e-06 57.0 43 55.8
CDE04G3461 Ceratophyllum demersum HOM05D001051 ORTHO05D000886 4.8e-06 57.0 43 55.8
Cc11_g10150 Coffea canephora HOM05D001106 ORTHO05D000910 4.8e-06 57.0 78 35.9
Lj4g0015701 Lotus japonicus HOM05D001051 ORTHO05D000886 4.8e-06 57.0 349 28.1
Peaxi162Scf00382g00067 Petunia axillaris HOM05D001106 ORTHO05D000910 4.8e-06 57.0 82 35.4
Pp3c2_35540 Physcomitrium patens HOM05D001106 ORTHO05D000910 4.8e-06 57.0 63 39.7
Psat6g228360 Pisum sativum HOM05D001106 ORTHO05D000910 4.8e-06 57.0 44 50.0
RcHm_v2.0_Chr4g0403841 Rosa chinensis HOM05D001051 ORTHO05D000886 4.8e-06 57.0 41 56.1
TPR.G3285 Trifolium pratense HOM05D001051 ORTHO05D000886 4.8e-06 57.0 41 56.1
Atru.chr9.837 Acer truncatum HOM05D001106 ORTHO05D000910 6.3e-06 56.6 64 40.6
CDE04G0770 Ceratophyllum demersum HOM05D001051 ORTHO05D000886 6.3e-06 56.6 41 58.5
COL.COLO4_20602 Corchorus olitorius HOM05D001106 ORTHO05D000910 6.3e-06 56.6 56 44.6
FAN07G2068 Fragaria x ananassa HOM05D001051 ORTHO05D000886 6.3e-06 56.6 41 56.1
HanXRQChr04g0121971 Helianthus annuus HOM05D001106 ORTHO05D000910 6.3e-06 56.6 44 52.3
Lsat_1_v5_gn_7_6501 Lactuca sativa HOM05D001106 ORTHO05D000910 6.3e-06 56.6 44 52.3
Lj5g0019912 Lotus japonicus HOM05D001106 ORTHO05D000910 6.3e-06 56.6 75 37.3
Nitab4.5_0000874g0020 Nicotiana tabacum HOM05D001106 ORTHO05D000910 6.3e-06 56.6 44 50.0
Nitab4.5_0003373g0100 Nicotiana tabacum HOM05D001106 ORTHO05D000910 6.3e-06 56.6 44 50.0
Sabra08G0091400 Salix brachista HOM05D001106 ORTHO05D000910 6.3e-06 56.6 78 38.5
Sopen05g005060 Solanum pennellii HOM05D001106 ORTHO05D000910 6.3e-06 56.6 59 42.4
TWI14G1218 Tripterygium wilfordii HOM05D003276 ORTHO05D003809 6.3e-06 56.6 51 52.9
Aa31LG5G12910 Aethionema arabicum HOM05D001051 ORTHO05D000886 8.2e-06 56.2 42 52.4
A07p31990 Brassica napus HOM05D001106 ORTHO05D000910 8.2e-06 56.2 92 37.0
CSS0017546 Camellia sinensis var. sinensis HOM05D001106 ORTHO05D000910 8.2e-06 56.2 95 30.5
CARHR197470 Cardamine hirsuta HOM05D001051 ORTHO05D000886 8.2e-06 56.2 43 51.2
CiPaw.16G085800 Carya illinoinensis HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 50.0
Ciclev10015173m.g Citrus clementina HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 50.0
Cc04_g07160 Coffea canephora HOM05D001106 ORTHO05D000910 8.2e-06 56.2 54 50.0
Dinv09797 Davidia involucrata HOM05D001106 ORTHO05D000910 8.2e-06 56.2 57 43.9
Dinv28098 Davidia involucrata HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 47.7
FAN02G1551 Fragaria x ananassa HOM05D001051 ORTHO05D000886 8.2e-06 56.2 41 51.2
HanXRQChr17g0552071 Helianthus annuus HOM05D001106 ORTHO05D000910 8.2e-06 56.2 59 42.4
Lsat_1_v5_gn_3_59241 Lactuca sativa HOM05D001106 ORTHO05D000910 8.2e-06 56.2 75 38.7
Lj2g0004218 Lotus japonicus HOM05D001106 ORTHO05D000910 8.2e-06 56.2 70 34.3
Lalb_Chr17g0342141 Lupinus albus HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 47.7
Peaxi162Scf01346g00018 Petunia axillaris HOM05D001106 ORTHO05D000910 8.2e-06 56.2 81 37.0
Pp3c22_5440 Physcomitrium patens HOM05D001106 ORTHO05D000910 8.2e-06 56.2 65 40.0
Pp3c7_25600 Physcomitrium patens HOM05D001051 ORTHO05D000886 8.2e-06 56.2 42 52.4
Potri.004G108320 Populus trichocarpa HOM05D001051 ORTHO05D000886 8.2e-06 56.2 340 25.9
Potri.008G120400 Populus trichocarpa HOM05D001106 ORTHO05D000910 8.2e-06 56.2 78 35.9
Potri.015G054600 Populus trichocarpa HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 50.0
Prupe.5G221000 Prunus persica HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 50.0
SalBow8G2735 Salvia bowleyana HOM05D001106 ORTHO05D000910 8.2e-06 56.2 148 30.4
Solyc05g009310.3 Solanum lycopersicum HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 50.0
Sopen04g002270 Solanum pennellii HOM05D001106 ORTHO05D000910 8.2e-06 56.2 74 37.8
PGSC0003DMG400014566 Solanum tuberosum HOM05D001106 ORTHO05D000910 8.2e-06 56.2 44 50.0
TWI60G1239 Tripterygium wilfordii HOM05D001106 ORTHO05D000910 8.2e-06 56.2 80 40.0
GSVIVG01036037001 Vitis vinifera HOM05D001051 ORTHO05D000886 8.2e-06 56.2 343 24.8


User provided reference genes

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