Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO10G065 Micromonas commoda HOM05D006847 ORTHO05D008685 8.5e-81 303.5 143 100.0
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 4.1e-19 98.6 138 41.3
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 3.5e-18 95.5 138 40.6
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 3.5e-18 95.5 144 38.9
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 6.0e-18 94.7 138 42.8
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 1.0e-17 94.0 138 40.6
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 1.0e-17 94.0 140 38.6
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 1.3e-17 93.6 138 42.0
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 1.3e-17 93.6 138 41.3
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 1.3e-17 93.6 138 40.6
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 1.7e-17 93.2 138 40.6
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 2.3e-17 92.8 138 40.6
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 2.3e-17 92.8 141 40.4
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 2.3e-17 92.8 138 40.6
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 2.3e-17 92.8 144 38.9
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.0e-17 92.4 138 41.3
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 3.0e-17 92.4 143 37.8
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 3.0e-17 92.4 138 39.1
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 3.0e-17 92.4 144 38.9
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 3.9e-17 92.0 144 37.5
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 5.0e-17 91.7 145 40.7
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 5.0e-17 91.7 141 38.3
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 6.6e-17 91.3 138 40.6
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 6.6e-17 91.3 146 42.5
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 6.6e-17 91.3 138 39.9
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 8.6e-17 90.9 138 40.6
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.1e-16 90.5 144 38.9
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 1.1e-16 90.5 139 36.7
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 1.1e-16 90.5 138 39.9
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.1e-16 90.5 146 41.8
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 1.5e-16 90.1 138 40.6
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.5e-16 90.1 141 38.3
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.9e-16 89.7 143 36.4
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 1.9e-16 89.7 138 39.1
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 1.9e-16 89.7 138 38.4
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 2.5e-16 89.4 138 40.6
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 2.5e-16 89.4 138 37.0
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 2.5e-16 89.4 135 40.0
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 2.5e-16 89.4 138 39.9
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.5e-16 89.4 138 39.1
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.5e-16 89.4 138 39.1
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.3e-16 89.0 133 42.1
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 3.3e-16 89.0 138 39.1
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 4.3e-16 88.6 138 39.1
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 4.3e-16 88.6 138 39.1
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 4.3e-16 88.6 135 40.7
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 4.3e-16 88.6 138 39.1
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 4.3e-16 88.6 144 35.4
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 4.3e-16 88.6 141 36.9
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 4.3e-16 88.6 138 38.4
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 4.3e-16 88.6 138 38.4
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 5.6e-16 88.2 138 39.1
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 5.6e-16 88.2 138 38.4
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 5.6e-16 88.2 138 38.4
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 7.3e-16 87.8 138 38.4
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 7.3e-16 87.8 143 35.7
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 9.5e-16 87.4 138 37.7
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 9.5e-16 87.4 145 37.2
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 9.5e-16 87.4 143 36.4
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 9.5e-16 87.4 138 38.4
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 1.2e-15 87.0 138 37.7
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.2e-15 87.0 141 39.0
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 1.2e-15 87.0 138 38.4
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 1.2e-15 87.0 144 36.1
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 1.2e-15 87.0 138 38.4
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 1.6e-15 86.7 141 37.6
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 1.6e-15 86.7 141 38.3
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.6e-15 86.7 138 40.6
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.6e-15 86.7 138 40.6
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 1.6e-15 86.7 138 38.4
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 1.6e-15 86.7 138 37.7
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.1e-15 86.3 144 35.4
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 2.1e-15 86.3 138 37.7
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.1e-15 86.3 141 35.5
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 2.8e-15 85.9 138 37.0
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.8e-15 85.9 145 36.6
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 4.7e-15 85.1 144 35.4
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 4.7e-15 85.1 138 38.4
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 6.2e-15 84.7 138 38.4
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 6.2e-15 84.7 138 39.1
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 8.1e-15 84.3 144 35.4
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 1.8e-14 83.2 141 37.6
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 5.2e-14 81.6 138 35.5
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 6.8e-14 81.3 126 38.9
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 1.2e-13 80.5 144 35.4
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 2.6e-13 79.3 144 35.4
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 2.6e-13 79.3 142 38.7
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 3.4e-13 79.0 141 37.6
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 4.9e-12 75.1 138 38.4
AagrBONN_evm.TU.Sc2ySwM_117.3731 Anthoceros agrestis HOM05D006847 ORTHO05D008685 8.3e-12 74.3 122 41.0
Pp3c16_11950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.0e-09 67.4 143 30.1
Solyc05g010630.4 Solanum lycopersicum HOM05D006847 ORTHO05D008685 2.5e-08 62.8 85 42.4
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 1.2e-07 60.5 143 32.2


User provided reference genes

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