Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G771 Micromonas commoda HOM05D006758 ORTHO05D008326 3.8e-53 211.1 95 100.0
Sp2g02770 Schrenkiella parvula HOM05D006758 ORTHO05D008326 6.5e-29 130.6 95 62.1
BcaB07g31284 Brassica carinata HOM05D006758 ORTHO05D008326 8.5e-29 130.2 95 62.1
BcaC04g22349 Brassica carinata HOM05D006758 ORTHO05D008326 8.5e-29 130.2 95 62.1
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 8.5e-29 130.2 95 62.1
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 8.5e-29 130.2 95 62.1
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 8.5e-29 130.2 95 62.1
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 8.5e-29 130.2 95 62.1
Thhalv10023778m.g Eutrema salsugineum HOM05D006758 ORTHO05D008326 1.5e-28 129.4 95 62.1
RcHm_v2.0_Chr5g0003931 Rosa chinensis HOM05D006758 ORTHO05D008326 1.5e-28 129.4 95 60.0
BcaB04g20373 Brassica carinata HOM05D006758 ORTHO05D008326 1.9e-28 129.0 95 61.1
Aa31LG1G3210 Aethionema arabicum HOM05D006758 ORTHO05D008326 2.5e-28 128.6 95 61.1
Carub.0002s0329 Capsella rubella HOM05D006758 ORTHO05D008326 2.5e-28 128.6 95 61.1
CARHR050560 Cardamine hirsuta HOM05D006758 ORTHO05D008326 2.5e-28 128.6 95 61.1
Cc02_g11670 Coffea canephora HOM05D006758 ORTHO05D008326 5.5e-28 127.5 95 58.9
DCAR_004197 Daucus carota HOM05D006758 ORTHO05D008326 7.2e-28 127.1 95 60.0
FvH4_3g02640 Fragaria vesca HOM05D006758 ORTHO05D008326 7.2e-28 127.1 95 58.9
Nitab4.5_0002347g0160 Nicotiana tabacum HOM05D006758 ORTHO05D008326 9.4e-28 126.7 95 60.0
Nitab4.5_0008530g0010 Nicotiana tabacum HOM05D006758 ORTHO05D008326 9.4e-28 126.7 95 60.0
Mapoly0102s0010 Marchantia polymorpha HOM05D006758 ORTHO05D008326 1.2e-27 126.3 95 60.0
SGA_v2.0_scaffold7G03879 Striga asiatica HOM05D006758 ORTHO05D008326 1.2e-27 126.3 95 60.0
Prupe.4G025700 Prunus persica HOM05D006758 ORTHO05D008326 1.6e-27 125.9 95 60.0
Lj5g0020351 Lotus japonicus HOM05D006758 ORTHO05D008326 2.1e-27 125.6 95 60.0
ATR0661G232 Amborella trichopoda HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 58.9
CAN.G569.41 Capsicum annuum HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 58.9
Ca_10997_v3 Cicer arietinum L. HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 58.9
MELO3C007373.2 Cucumis melo HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 60.0
CsaV3_6G049220 Cucumis sativus L. HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 60.0
MD05G1341600 Malus domestica HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 60.0
Potri.004G021200 Populus trichocarpa HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 58.9
Solyc02g080140.4 Solanum lycopersicum HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 58.9
Sopen02g024850 Solanum pennellii HOM05D006758 ORTHO05D008326 2.7e-27 125.2 95 58.9
AL2G14330 Arabidopsis lyrata HOM05D006758 ORTHO05D008326 3.6e-27 124.8 95 58.9
AT1G61780 Arabidopsis thaliana HOM05D006758 ORTHO05D008326 3.6e-27 124.8 95 58.9
Glyma.10G251800 Glycine max HOM05D006758 ORTHO05D008326 3.6e-27 124.8 95 58.9
Glyma.20G141700 Glycine max HOM05D006758 ORTHO05D008326 3.6e-27 124.8 95 58.9
Lalb_Chr06g0164881 Lupinus albus HOM05D006758 ORTHO05D008326 3.6e-27 124.8 95 58.9
TPR.G5478 Trifolium pratense HOM05D006758 ORTHO05D008326 4.7e-27 124.4 95 58.9
Migut.M01286 Erythranthe guttata HOM05D006758 ORTHO05D008326 6.1e-27 124.0 95 58.9
Rhsim02G0111700 Rhododendron simsii HOM05D006758 ORTHO05D008326 6.1e-27 124.0 95 58.9
Oeu037351.1 Olea europaea HOM05D006758 ORTHO05D008326 8.0e-27 123.6 95 58.9
CANSAT56G2354 Cannabis sativa HOM05D006758 ORTHO05D008326 1.0e-26 123.2 95 57.9
Ciclev10017296m.g Citrus clementina HOM05D006758 ORTHO05D008326 1.0e-26 123.2 95 57.9
PGR004G2441 Punica granatum HOM05D006758 ORTHO05D008326 1.0e-26 123.2 95 58.9
Sabra04G0011700 Salix brachista HOM05D006758 ORTHO05D008326 1.0e-26 123.2 95 57.9
THA.LOC104809516 Tarenaya hassleriana HOM05D006758 ORTHO05D008326 1.0e-26 123.2 95 58.9
arahy.Tifrunner.gnm1.ann1.ND4ZK6 Arachis hypogaea HOM05D006758 ORTHO05D008326 1.4e-26 122.9 95 57.9
DCAR_008127 Daucus carota HOM05D006758 ORTHO05D008326 1.4e-26 122.9 95 58.9
MD10G1315000 Malus domestica HOM05D006758 ORTHO05D008326 1.4e-26 122.9 95 58.9
Phvul.007G052700 Phaseolus vulgaris HOM05D006758 ORTHO05D008326 1.4e-26 122.9 95 57.9
EL10Ac8g19995 Beta vulgaris HOM05D006758 ORTHO05D008326 1.8e-26 122.5 95 57.9
Psat0s2691g0120 Pisum sativum HOM05D006758 ORTHO05D008326 1.8e-26 122.5 95 57.9
CiPaw.09G087600 Carya illinoinensis HOM05D006758 ORTHO05D008326 2.3e-26 122.1 95 58.9
Dinv20021 Davidia involucrata HOM05D006758 ORTHO05D008326 2.3e-26 122.1 95 57.9
TAR626G1807 Trochodendron aralioides HOM05D006758 ORTHO05D008326 2.3e-26 122.1 95 56.8
Manes.17G035700 Manihot esculenta HOM05D006758 ORTHO05D008326 3.0e-26 121.7 95 57.9
Pp3c2_14210 Physcomitrium patens HOM05D006758 ORTHO05D008326 3.0e-26 121.7 95 57.9
PSO210G7269 Papaver somniferum HOM05D006758 ORTHO05D008326 4.0e-26 121.3 95 57.9
PSO832G0089 Papaver somniferum HOM05D006758 ORTHO05D008326 4.0e-26 121.3 95 57.9
COL.COLO4_31733 Corchorus olitorius HOM05D006758 ORTHO05D008326 5.2e-26 120.9 95 56.8
Hma1.2p1_2726F.1_g327620 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 5.2e-26 120.9 95 58.9
Gohir.A09G069700 Gossypium hirsutum HOM05D006758 ORTHO05D008326 6.7e-26 120.6 95 56.8
Gohir.D09G069600 Gossypium hirsutum HOM05D006758 ORTHO05D008326 6.7e-26 120.6 95 56.8
Hma1.2p1_2714F.1_g327410 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 6.7e-26 120.6 95 58.9
TAR624G0544 Trochodendron aralioides HOM05D006758 ORTHO05D008326 6.7e-26 120.6 95 57.9
GSVIVG01012634001 Vitis vinifera HOM05D006758 ORTHO05D008326 6.7e-26 120.6 95 57.9
Eucgr.D01293 Eucalyptus grandis HOM05D006758 ORTHO05D008326 1.2e-25 119.8 95 56.8
Sed0024295 Sechium edule HOM05D006758 ORTHO05D008326 1.2e-25 119.8 95 56.8
Thecc.06G214600 Theobroma cacao HOM05D006758 ORTHO05D008326 1.2e-25 119.8 95 55.8
TWI38G0518 Tripterygium wilfordii HOM05D006758 ORTHO05D008326 1.2e-25 119.8 95 56.8
Actinidia11840 Actinidia chinensis HOM05D006758 ORTHO05D008326 1.5e-25 119.4 95 57.9
AagrBONN_evm.TU.Sc2ySwM_344.4905 Anthoceros agrestis HOM05D006758 ORTHO05D008326 1.5e-25 119.4 95 56.8
CDE05G3555 Ceratophyllum demersum HOM05D006758 ORTHO05D008326 2.6e-25 118.6 95 55.8
Duzib235G1228 Durio zibethinus HOM05D006758 ORTHO05D008326 3.3e-25 118.2 95 55.8
Os08g0190800 Oryza sativa ssp. japonica HOM05D006758 ORTHO05D008326 4.4e-25 117.9 95 55.8
AUR62022003 Chenopodium quinoa HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 56.8
ECA234G0861 Erigeron canadensis HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 55.8
Gohir.A06G207900 Gossypium hirsutum HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 54.7
Gorai.010G252900 Gossypium raimondii HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 54.7
Lsat_1_v5_gn_4_59120 Lactuca sativa HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 56.8
Nn1g03624 Nelumbo nucifera HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 55.8
Zm00001eb413280 Zea mays HOM05D006758 ORTHO05D008326 5.7e-25 117.5 95 55.8
Duzib192G0534 Durio zibethinus HOM05D006758 ORTHO05D008326 9.7e-25 116.7 95 54.7
HanXRQChr16g0515881 Helianthus annuus HOM05D006758 ORTHO05D008326 9.7e-25 116.7 95 55.8
arahy.Tifrunner.gnm1.ann1.GJ8XD1 Arachis hypogaea HOM05D006758 ORTHO05D008326 4.8e-24 114.4 106 51.9
CBR_g45280 Chara braunii HOM05D006758 ORTHO05D008326 8.2e-24 113.6 92 54.3
Sabra11G0016800 Salix brachista HOM05D006758 ORTHO05D008326 1.1e-23 113.2 95 53.7
ClCG01G022160 Citrullus lanatus HOM05D006758 ORTHO05D008326 1.4e-23 112.8 99 55.6
unitig_61.g26114 Utricularia gibba HOM05D006758 ORTHO05D008326 1.2e-22 109.8 121 46.3
CSS0030244 Camellia sinensis var. sinensis HOM05D006758 ORTHO05D008326 2.0e-22 109.0 85 57.6
Gorai.006G083800 Gossypium raimondii HOM05D006758 ORTHO05D008326 2.7e-22 108.6 92 54.3
Oeu051222.1 Olea europaea HOM05D006758 ORTHO05D008326 2.7e-22 108.6 89 56.2
SHI02162 Sapria himalayana HOM05D006758 ORTHO05D008326 7.7e-22 107.1 93 52.7
Dinv17829 Davidia involucrata HOM05D006758 ORTHO05D008326 1.3e-21 106.3 89 55.1
SMO351G0293 Selaginella moellendorffii HOM05D006758 ORTHO05D008326 1.7e-21 105.9 88 52.3
Cre16.g670200 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 1.9e-20 102.4 97 51.5
Ah.09g235270 Amaranthus hybridus HOM05D006758 ORTHO05D008326 2.5e-20 102.1 92 52.2
Peaxi162Scf00082g10217 Petunia axillaris HOM05D006758 ORTHO05D008326 6.1e-19 97.4 97 49.5
Sc17g0007080 Simmondsia chinensis HOM05D006758 ORTHO05D008326 1.0e-18 96.7 83 54.2
Cre16.g689376 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 4.5e-14 81.3 82 50.0
Hund23506 Selenicereus undatus HOM05D006758 ORTHO05D008326 4.5e-14 81.3 76 53.9
Haze_06744 Corylus avellana HOM05D006758 ORTHO05D008326 3.7e-08 61.6 46 60.9
FAN25G0357 Fragaria x ananassa HOM05D006758 ORTHO05D008326 3.7e-08 61.6 45 62.2
HPP92_000849 Vanilla planifolia HOM05D006758 ORTHO05D008326 1.4e-07 59.7 44 61.4
MBI02_g21861_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 1.8e-07 59.3 43 62.8
QL05p074940 Quercus lobata HOM05D006758 ORTHO05D008326 1.8e-07 59.3 46 58.7
QL93p0073_0472 Quercus lobata HOM05D006758 ORTHO05D008326 1.8e-07 59.3 46 58.7
SalBow1G3298 Salvia bowleyana HOM05D006758 ORTHO05D008326 1.8e-07 59.3 45 60.0
FAN21G3907 Fragaria x ananassa HOM05D006758 ORTHO05D008326 5.4e-07 57.8 44 59.1
vmacro15829 Vaccinium macrocarpon HOM05D006758 ORTHO05D008326 5.4e-07 57.8 43 60.5
Ah.14g088140 Amaranthus hybridus HOM05D000097 ORTHO05D000041 2.0e-06 55.8 45 57.8
A01p30660 Brassica napus HOM05D006758 ORTHO05D008326 2.0e-06 55.8 36 58.3
A01p30680 Brassica napus HOM05D006758 ORTHO05D008326 7.8e-06 53.9 36 55.6
BraA01t03197Z Brassica rapa HOM05D006758 ORTHO05D008326 7.8e-06 53.9 36 55.6


User provided reference genes

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