Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G691 Micromonas commoda HOM05D006629 ORTHO05D049056 7.0e-84 313.9 159 100.0
PRCOL_00002946 Prasinoderma coloniale HOM05D006629 ORTHO05D049056 9.2e-28 127.5 140 50.0
ATR0322G059 Amborella trichopoda HOM05D006629 ORTHO05D008430 2.6e-14 82.8 117 42.7
CDE04G2501 Ceratophyllum demersum HOM05D006629 ORTHO05D008430 4.4e-14 82.0 116 44.0
MBI01_g47382_MAGBIO Magnolia biondii HOM05D006629 ORTHO05D008430 1.3e-13 80.5 122 41.8
Haze_16533 Corylus avellana HOM05D006629 ORTHO05D008430 1.7e-13 80.1 116 41.4
Eucgr.F02111 Eucalyptus grandis HOM05D006629 ORTHO05D008430 1.7e-13 80.1 117 42.7
Eucgr.F02534 Eucalyptus grandis HOM05D006629 ORTHO05D008430 1.7e-13 80.1 117 42.7
Mapoly0033s0027 Marchantia polymorpha HOM05D006629 ORTHO05D008430 2.2e-13 79.7 127 40.2
PGR102G3125 Punica granatum HOM05D006629 ORTHO05D008430 2.2e-13 79.7 116 43.1
CDE06G1467 Ceratophyllum demersum HOM05D006629 ORTHO05D008430 3.8e-13 79.0 116 44.0
CsaV3_4G001490 Cucumis sativus L. HOM05D006629 ORTHO05D008430 3.8e-13 79.0 117 43.6
SMO266G0086 Selaginella moellendorffii HOM05D006629 ORTHO05D008430 4.9e-13 78.6 138 39.1
CSS0049498 Camellia sinensis var. sinensis HOM05D006629 ORTHO05D008430 6.4e-13 78.2 117 42.7
CAN.G407.97 Capsicum annuum HOM05D006629 ORTHO05D008430 6.4e-13 78.2 116 41.4
Gohir.A06G186400 Gossypium hirsutum HOM05D006629 ORTHO05D008430 6.4e-13 78.2 117 41.0
unitig_52.g17452 Utricularia gibba HOM05D006629 ORTHO05D008430 6.4e-13 78.2 116 40.5
Gohir.D06G192700 Gossypium hirsutum HOM05D006629 ORTHO05D008430 8.4e-13 77.8 117 41.0
Gorai.010G226500 Gossypium raimondii HOM05D006629 ORTHO05D008430 8.4e-13 77.8 117 41.0
Oeu052266.1 Olea europaea HOM05D006629 ORTHO05D008430 8.4e-13 77.8 121 41.3
CSS0009902 Camellia sinensis var. sinensis HOM05D006629 ORTHO05D008430 1.1e-12 77.4 117 42.7
MELO3C017890.2 Cucumis melo HOM05D006629 ORTHO05D008430 1.1e-12 77.4 117 42.7
ECA234G2539 Erigeron canadensis HOM05D006629 ORTHO05D008430 1.1e-12 77.4 116 40.5
Lalb_Chr22g0350921 Lupinus albus HOM05D006629 ORTHO05D008430 1.1e-12 77.4 116 40.5
Phvul.005G176800 Phaseolus vulgaris HOM05D006629 ORTHO05D008430 1.1e-12 77.4 116 39.7
GSVIVG01017300001 Vitis vinifera HOM05D006629 ORTHO05D008430 1.1e-12 77.4 114 42.1
CiPaw.01G246000 Carya illinoinensis HOM05D006629 ORTHO05D008430 1.4e-12 77.0 116 41.4
Lsat_1_v5_gn_5_131321 Lactuca sativa HOM05D006629 ORTHO05D008430 1.4e-12 77.0 116 41.4
Rhsim08G0214800 Rhododendron simsii HOM05D006629 ORTHO05D008430 1.4e-12 77.0 117 43.6
Sed0005686 Sechium edule HOM05D006629 ORTHO05D008430 1.9e-12 76.6 116 42.2
Hund00536 Selenicereus undatus HOM05D006629 ORTHO05D008430 1.9e-12 76.6 116 41.4
Sopen03g035480 Solanum pennellii HOM05D006629 ORTHO05D008430 1.9e-12 76.6 116 40.5
Actinidia15782 Actinidia chinensis HOM05D006629 ORTHO05D008430 2.4e-12 76.3 116 39.7
ClCG07G012710 Citrullus lanatus HOM05D006629 ORTHO05D008430 2.4e-12 76.3 116 41.4
DCAR_025501 Daucus carota HOM05D006629 ORTHO05D008430 2.4e-12 76.3 128 36.7
Nitab4.5_0010254g0040 Nicotiana tabacum HOM05D006629 ORTHO05D008430 2.4e-12 76.3 116 40.5
QL05p028345 Quercus lobata HOM05D006629 ORTHO05D008430 2.4e-12 76.3 117 41.9
Solyc03g116570.3 Solanum lycopersicum HOM05D006629 ORTHO05D008430 2.4e-12 76.3 116 40.5
PGSC0003DMG400000613 Solanum tuberosum HOM05D006629 ORTHO05D008430 2.4e-12 76.3 116 41.4
Thecc.06G069100 Theobroma cacao HOM05D006629 ORTHO05D008430 2.4e-12 76.3 116 40.5
Ca_01063_v3 Cicer arietinum L. HOM05D006629 ORTHO05D008430 3.2e-12 75.9 116 40.5
Sc23g0006680 Simmondsia chinensis HOM05D006629 ORTHO05D008430 3.2e-12 75.9 116 40.5
TAR383G1031 Trochodendron aralioides HOM05D006629 ORTHO05D008430 3.2e-12 75.9 130 38.5
VMungo1080G1280 Vigna mungo HOM05D006629 ORTHO05D008430 3.2e-12 75.9 116 38.8
Aqoxy7G03710 Aquilegia oxysepala HOM05D006629 ORTHO05D008430 4.2e-12 75.5 116 39.7
Ciclev10026597m.g Citrus clementina HOM05D006629 ORTHO05D008430 4.2e-12 75.5 126 35.7
Hma1.2p1_0042F.1_g025470 Hydrangea macrophylla HOM05D006629 ORTHO05D008430 4.2e-12 75.5 117 40.2
Potri.008G213200 Populus trichocarpa HOM05D006629 ORTHO05D008430 4.2e-12 75.5 134 37.3
HanXRQChr12g0361441 Helianthus annuus HOM05D006629 ORTHO05D008430 5.4e-12 75.1 116 40.5
Medtr2g103590 Medicago truncatula HOM05D006629 ORTHO05D008430 5.4e-12 75.1 116 39.7
RcHm_v2.0_Chr2g0136021 Rosa chinensis HOM05D006629 ORTHO05D008430 5.4e-12 75.1 116 40.5
SGA_v2.0_scaffold5G02676 Striga asiatica HOM05D006629 ORTHO05D008430 5.4e-12 75.1 129 38.8
MSTRG.11130 Avicennia marina HOM05D006629 ORTHO05D008430 7.1e-12 74.7 128 36.7
FvH4_6g30000 Fragaria vesca HOM05D006629 ORTHO05D008430 7.1e-12 74.7 116 39.7
FAN02G3434 Fragaria x ananassa HOM05D006629 ORTHO05D008430 7.1e-12 74.7 116 39.7
FAN14G1255 Fragaria x ananassa HOM05D006629 ORTHO05D008430 7.1e-12 74.7 116 39.7
Rhsim04G0187300 Rhododendron simsii HOM05D006629 ORTHO05D008430 7.1e-12 74.7 113 43.4
SalBow2G3434 Salvia bowleyana HOM05D006629 ORTHO05D008430 7.1e-12 74.7 116 37.9
TPR.G37207 Trifolium pratense HOM05D006629 ORTHO05D008430 7.1e-12 74.7 116 38.8
Ah.01g020720 Amaranthus hybridus HOM05D006629 ORTHO05D008430 9.3e-12 74.3 116 38.8
A08p02130 Brassica napus HOM05D006629 ORTHO05D008430 9.3e-12 74.3 117 41.9
BraA08t32260Z Brassica rapa HOM05D006629 ORTHO05D008430 9.3e-12 74.3 117 41.9
Duzib235G0045 Durio zibethinus HOM05D006629 ORTHO05D008430 9.3e-12 74.3 117 39.3
Atru.chr1.3007 Acer truncatum HOM05D006629 ORTHO05D008430 1.2e-11 73.9 142 34.5
MD00G1022200 Malus domestica HOM05D006629 ORTHO05D008430 1.2e-11 73.9 116 37.9
Nitab4.5_0001764g0020 Nicotiana tabacum HOM05D006629 ORTHO05D008430 1.2e-11 73.9 116 39.7
BcaB04g17151 Brassica carinata HOM05D006629 ORTHO05D008430 1.6e-11 73.6 117 41.0
Carub.0001s4159 Capsella rubella HOM05D006629 ORTHO05D008430 1.6e-11 73.6 117 40.2
Glyma.13G364600 Glycine max HOM05D006629 ORTHO05D008430 1.6e-11 73.6 116 38.8
Lj3g0011933 Lotus japonicus HOM05D006629 ORTHO05D008430 1.6e-11 73.6 116 38.8
Peaxi162Scf00332g00758 Petunia axillaris HOM05D006629 ORTHO05D008430 1.6e-11 73.6 130 38.5
EL10Ac9g21916 Beta vulgaris HOM05D006629 ORTHO05D008430 2.1e-11 73.2 116 37.9
BcaC01g01330 Brassica carinata HOM05D006629 ORTHO05D008430 2.1e-11 73.2 117 41.0
C03p90690 Brassica napus HOM05D006629 ORTHO05D008430 2.1e-11 73.2 117 41.0
BolC3t21390H Brassica oleracea HOM05D006629 ORTHO05D008430 2.1e-11 73.2 117 41.0
Cpa.g.sc10.240 Carica papaya HOM05D006629 ORTHO05D008430 2.1e-11 73.2 128 37.5
Thhalv10011823m.g Eutrema salsugineum HOM05D006629 ORTHO05D008430 2.1e-11 73.2 117 41.0
PSO017G2975 Papaver somniferum HOM05D006629 ORTHO05D008430 2.1e-11 73.2 117 41.9
THA.LOC104818030 Tarenaya hassleriana HOM05D006629 ORTHO05D008430 2.1e-11 73.2 116 38.8
Aa31LG10G2420 Aethionema arabicum HOM05D006629 ORTHO05D008430 2.7e-11 72.8 116 40.5
TWI18G0931 Tripterygium wilfordii HOM05D006629 ORTHO05D008430 2.7e-11 72.8 135 37.8
Sp1g39150 Schrenkiella parvula HOM05D006629 ORTHO05D008430 3.5e-11 72.4 117 41.0
AUR62011536 Chenopodium quinoa HOM05D006629 ORTHO05D008430 4.6e-11 72.0 141 39.0
AUR62016355 Chenopodium quinoa HOM05D006629 ORTHO05D008430 4.6e-11 72.0 122 38.5
Cc04_g04220 Coffea canephora HOM05D006629 ORTHO05D008430 4.6e-11 72.0 116 39.7
Lj5C70G0 Lonicera japonica HOM05D006629 ORTHO05D008430 4.6e-11 72.0 116 37.9
AT1G52590 Arabidopsis thaliana HOM05D006629 ORTHO05D008430 6.0e-11 71.6 117 40.2
AL1G60870 Arabidopsis lyrata HOM05D006629 ORTHO05D008430 7.9e-11 71.2 117 39.3
Prupe.3G083500 Prunus persica HOM05D006629 ORTHO05D008430 7.9e-11 71.2 116 37.1
MCO16G483 Micromonas commoda HOM05D006629 ORTHO05D008430 1.0e-10 70.9 119 40.3
MBI01_g40020_MAGBIO Magnolia biondii HOM05D006629 ORTHO05D008430 1.3e-10 70.5 134 38.8
Nn8g39443 Nelumbo nucifera HOM05D006629 ORTHO05D008430 1.3e-10 70.5 116 38.8
CARHR042720 Cardamine hirsuta HOM05D006629 ORTHO05D008430 1.7e-10 70.1 116 38.8
HPP92_021817 Vanilla planifolia HOM05D006629 ORTHO05D008430 1.7e-10 70.1 125 39.2
PRCOL_00001525 Prasinoderma coloniale HOM05D006629 ORTHO05D008430 5.1e-10 68.6 126 37.3
Pp3c1_15690 Physcomitrium patens HOM05D006629 ORTHO05D008430 6.6e-10 68.2 134 38.8
vmacro18979 Vaccinium macrocarpon HOM05D006629 ORTHO05D008430 6.2e-08 61.6 91 45.1
vmacro23010 Vaccinium macrocarpon HOM05D006629 ORTHO05D008430 6.2e-08 61.6 91 45.1
MBI14_g42957_MAGBIO Magnolia biondii HOM05D006629 ORTHO05D008430 8.1e-08 61.2 114 36.8
FAN09G3876 Fragaria x ananassa HOM05D006629 ORTHO05D008430 1.1e-07 60.8 90 41.1
MD13G1087000 Malus domestica HOM05D001690 ORTHO05D009096 1.8e-07 60.1 114 33.3
TPR.G39004 Trifolium pratense HOM05D006629 ORTHO05D008430 9.0e-07 57.8 99 36.4
COL.COLO4_12927 Corchorus olitorius HOM05D006629 ORTHO05D008430 1.5e-06 57.0 115 32.2
MSTRG.621 Avicennia marina HOM05D001690 ORTHO05D009096 2.6e-06 56.2 116 35.3
Dinv30585 Davidia involucrata HOM05D006629 ORTHO05D008430 4.5e-06 55.5 101 35.6
Glyma.02G037900 Glycine max HOM05D001690 ORTHO05D009096 5.8e-06 55.1 116 37.1
Prupe.1G259700 Prunus persica HOM05D001690 ORTHO05D009096 5.8e-06 55.1 114 33.3
CsaV3_5G031860 Cucumis sativus L. HOM05D001690 ORTHO05D009096 9.9e-06 54.3 124 32.3


User provided reference genes

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