Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G652 Micromonas commoda HOM05D004920 ORTHO05D005998 2.2e-114 415.6 206 100.0
Cre10.g437050 Chlamydomonas reinhardtii HOM05D004920 ORTHO05D005998 1.0e-18 97.8 173 32.9
AagrBONN_evm.TU.Sc2ySwM_228.2942 Anthoceros agrestis HOM05D004920 ORTHO05D005998 1.9e-17 93.6 117 35.9
Pp3c14_19140 Physcomitrium patens HOM05D004920 ORTHO05D005998 1.9e-17 93.6 160 32.5
Hund21192 Selenicereus undatus HOM05D004920 ORTHO05D005998 2.1e-16 90.1 117 34.2
Mapoly0023s0159 Marchantia polymorpha HOM05D004920 ORTHO05D005998 3.6e-16 89.4 117 33.3
DCAR_007975 Daucus carota HOM05D004920 ORTHO05D005998 8.0e-16 88.2 124 33.9
SMO196G0025 Selaginella moellendorffii HOM05D004920 ORTHO05D005998 1.1e-15 87.8 123 31.7
Gohir.A05G157100 Gossypium hirsutum HOM05D004920 ORTHO05D005998 2.3e-15 86.7 117 34.2
Ah.05g178940 Amaranthus hybridus HOM05D004920 ORTHO05D005998 3.1e-15 86.3 143 30.8
MSTRG.14155 Avicennia marina HOM05D004920 ORTHO05D005998 3.1e-15 86.3 117 32.5
Gohir.D05G160000 Gossypium hirsutum HOM05D004920 ORTHO05D005998 3.1e-15 86.3 117 34.2
Duzib235G1063 Durio zibethinus HOM05D004920 ORTHO05D005998 6.8e-15 85.1 117 34.2
Gohir.D01G045600 Gossypium hirsutum HOM05D004920 ORTHO05D005998 6.8e-15 85.1 117 34.2
EL10Ac1g01008 Beta vulgaris HOM05D004920 ORTHO05D005998 8.9e-15 84.7 143 30.8
Migut.M01075 Erythranthe guttata HOM05D004920 ORTHO05D005998 8.9e-15 84.7 185 30.8
Gorai.002G065200 Gossypium raimondii HOM05D004920 ORTHO05D005998 8.9e-15 84.7 117 34.2
Thecc.06G177000 Theobroma cacao HOM05D004920 ORTHO05D005998 8.9e-15 84.7 117 34.2
ECA236G4389 Erigeron canadensis HOM05D004920 ORTHO05D005998 1.5e-14 84.0 117 31.6
AUR62031127 Chenopodium quinoa HOM05D004920 ORTHO05D005998 3.4e-14 82.8 117 32.5
Sed0019770 Sechium edule HOM05D004920 ORTHO05D005998 3.4e-14 82.8 117 30.8
TPR.G16259 Trifolium pratense HOM05D004920 ORTHO05D005998 3.4e-14 82.8 117 35.0
AUR62014920 Chenopodium quinoa HOM05D004920 ORTHO05D005998 4.4e-14 82.4 117 31.6
THA.LOC104812631 Tarenaya hassleriana HOM05D004920 ORTHO05D005998 4.4e-14 82.4 117 29.9
Ca_10660_v3 Cicer arietinum L. HOM05D004920 ORTHO05D005998 5.8e-14 82.0 117 32.5
ClCG01G023480 Citrullus lanatus HOM05D004920 ORTHO05D005998 5.8e-14 82.0 143 28.7
CsaV3_6G050600 Cucumis sativus L. HOM05D004920 ORTHO05D005998 9.8e-14 81.3 117 29.9
HanXRQChr15g0481321 Helianthus annuus HOM05D004920 ORTHO05D005998 9.8e-14 81.3 124 29.0
Ciclev10016425m.g Citrus clementina HOM05D004920 ORTHO05D005998 1.3e-13 80.9 117 31.6
Lj4g0024893 Lotus japonicus HOM05D004920 ORTHO05D005998 1.3e-13 80.9 117 32.5
Atru.chr10.1743 Acer truncatum HOM05D004920 ORTHO05D005998 1.7e-13 80.5 117 30.8
Actinidia07625 Actinidia chinensis HOM05D004920 ORTHO05D005998 1.7e-13 80.5 117 30.8
BcaC02g07783 Brassica carinata HOM05D004920 ORTHO05D005998 1.7e-13 80.5 117 29.1
Sc17g0005830 Simmondsia chinensis HOM05D004920 ORTHO05D005998 1.7e-13 80.5 117 31.6
VMungo1127G0753 Vigna mungo HOM05D004920 ORTHO05D005998 1.7e-13 80.5 117 31.6
A05p11610 Brassica napus HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 29.1
BolC4t23082H Brassica oleracea HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 29.1
BraA05t20108Z Brassica rapa HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 29.1
Lsat_1_v5_gn_7_23761 Lactuca sativa HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 29.9
PSO541G3866 Papaver somniferum HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 29.9
Phvul.001G005700 Phaseolus vulgaris HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 33.3
SGA_v2.0_scaffold16G07660 Striga asiatica HOM05D004920 ORTHO05D005998 2.2e-13 80.1 117 30.8
C04p15060 Brassica napus HOM05D004920 ORTHO05D005998 2.9e-13 79.7 117 29.1
Thhalv10017133m.g Eutrema salsugineum HOM05D004920 ORTHO05D005998 2.9e-13 79.7 117 28.2
FvH4_3g08250 Fragaria vesca HOM05D004920 ORTHO05D005998 2.9e-13 79.7 117 30.8
FAN11G1044 Fragaria x ananassa HOM05D004920 ORTHO05D005998 2.9e-13 79.7 117 30.8
FAN16G1146 Fragaria x ananassa HOM05D004920 ORTHO05D005998 2.9e-13 79.7 117 30.8
Cfa000557 Carpinus fangiana HOM05D004920 ORTHO05D005998 3.7e-13 79.3 124 29.8
Sed0013972 Sechium edule HOM05D004920 ORTHO05D005998 3.7e-13 79.3 143 28.7
THA.LOC104814688 Tarenaya hassleriana HOM05D004920 ORTHO05D005998 3.7e-13 79.3 143 29.4
PSO675G0526 Papaver somniferum HOM05D004920 ORTHO05D005998 4.9e-13 79.0 117 29.1
A04p26140 Brassica napus HOM05D004920 ORTHO05D005998 6.4e-13 78.6 117 28.2
CARHR128130 Cardamine hirsuta HOM05D004920 ORTHO05D005998 6.4e-13 78.6 117 28.2
FAN03G1929 Fragaria x ananassa HOM05D004920 ORTHO05D005998 6.4e-13 78.6 117 29.9
Glyma.12G114600 Glycine max HOM05D004920 ORTHO05D005998 6.4e-13 78.6 117 31.6
Medtr4g087955 Medicago truncatula HOM05D004920 ORTHO05D005998 6.4e-13 78.6 117 29.9
Lalb_Chr07g0189681 Lupinus albus HOM05D004920 ORTHO05D005998 8.3e-13 78.2 117 31.6
RcHm_v2.0_Chr5g0009901 Rosa chinensis HOM05D004920 ORTHO05D005998 8.3e-13 78.2 117 29.9
CiPaw.09G066500 Carya illinoinensis HOM05D004920 ORTHO05D005998 1.1e-12 77.8 117 30.8
TPR.G17014 Trifolium pratense HOM05D004920 ORTHO05D005998 1.1e-12 77.8 117 31.6
Aa31LG9G13860 Aethionema arabicum HOM05D004920 ORTHO05D005998 1.4e-12 77.4 117 27.4
AT2G34050 Arabidopsis thaliana HOM05D004920 ORTHO05D005998 1.4e-12 77.4 117 29.1
PGR004G0415 Punica granatum HOM05D004920 ORTHO05D005998 1.4e-12 77.4 130 30.0
PGR046G0004 Punica granatum HOM05D004920 ORTHO05D005998 1.4e-12 77.4 130 30.0
SGA_v2.0_scaffold341G49353 Striga asiatica HOM05D004920 ORTHO05D005998 1.4e-12 77.4 117 29.9
Dinv40630 Davidia involucrata HOM05D004920 ORTHO05D005998 1.9e-12 77.0 117 29.1
Sp4g16400 Schrenkiella parvula HOM05D004920 ORTHO05D005998 1.9e-12 77.0 117 28.2
AL4G29930 Arabidopsis lyrata HOM05D004920 ORTHO05D005998 2.4e-12 76.6 117 28.2
BcaB02g10610 Brassica carinata HOM05D004920 ORTHO05D005998 2.4e-12 76.6 117 28.2
Carub.0004s1568 Capsella rubella HOM05D004920 ORTHO05D005998 2.4e-12 76.6 117 28.2
Dinv36435 Davidia involucrata HOM05D004920 ORTHO05D005998 2.4e-12 76.6 117 29.1
C04p63520 Brassica napus HOM05D004920 ORTHO05D005998 3.2e-12 76.3 117 28.2
BolC4t27823H Brassica oleracea HOM05D004920 ORTHO05D005998 3.2e-12 76.3 117 27.4
BraA04t18117Z Brassica rapa HOM05D004920 ORTHO05D005998 3.2e-12 76.3 117 28.2
Cpa.g.sc80.25 Carica papaya HOM05D004920 ORTHO05D005998 3.2e-12 76.3 117 28.2
Eucgr.D00572 Eucalyptus grandis HOM05D004920 ORTHO05D005998 4.1e-12 75.9 165 29.7
HPP92_018237 Vanilla planifolia HOM05D004920 ORTHO05D005998 4.1e-12 75.9 117 30.8
GSVIVG01021153001 Vitis vinifera HOM05D004920 ORTHO05D005998 7.0e-12 75.1 117 29.1
Haze_06318 Corylus avellana HOM05D004920 ORTHO05D005998 9.2e-12 74.7 124 28.2
CDE02G3849 Ceratophyllum demersum HOM05D004920 ORTHO05D005998 1.2e-11 74.3 117 29.9
Aqoxy1G02218 Aquilegia oxysepala HOM05D004920 ORTHO05D005998 2.7e-11 73.2 108 29.6
CANSAT35G1037 Cannabis sativa HOM05D004920 ORTHO05D005998 2.7e-11 73.2 117 27.4
MD10G1285300 Malus domestica HOM05D004920 ORTHO05D005998 2.7e-11 73.2 117 28.2
BcaB06g28727 Brassica carinata HOM05D004920 ORTHO05D005998 4.6e-11 72.4 117 27.4
MD05G1306300 Malus domestica HOM05D004920 ORTHO05D005998 4.6e-11 72.4 117 28.2
Hma1.2p1_0155F.1_g068520 Hydrangea macrophylla HOM05D004920 ORTHO05D005998 1.7e-10 70.5 124 29.0
SEGI_15656 Sequoiadendron giganteum HOM05D004920 ORTHO05D005998 3.3e-09 66.2 92 35.9
Rhsim02G0138400 Rhododendron simsii HOM05D004920 ORTHO05D005998 5.6e-09 65.5 117 28.2
FAN25G0865 Fragaria x ananassa HOM05D004920 ORTHO05D005998 1.6e-08 63.9 92 32.6
BcaB06g28732 Brassica carinata HOM05D004920 ORTHO05D005998 1.1e-07 61.2 87 28.7
Glyma.06G291400 Glycine max HOM05D004920 ORTHO05D005998 1.4e-07 60.8 101 29.7
BcaC01g05809 Brassica carinata HOM05D004920 ORTHO05D005998 1.8e-07 60.5 123 24.4
Gorai.009G165000 Gossypium raimondii HOM05D004920 ORTHO05D005998 1.2e-06 57.8 117 26.5
Rhsim06G0035100 Rhododendron simsii HOM05D004920 ORTHO05D005998 1.5e-06 57.4 130 23.1


User provided reference genes

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