Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G637 Micromonas commoda HOM05D006592 ORTHO05D008122 5.7e-309 1063.5 581 100.0
AagrBONN_evm.TU.Sc2ySwM_344.4668 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.8e-42 177.6 408 31.9
SMO244G0026 Selaginella moellendorffii HOM05D006592 ORTHO05D008122 2.8e-42 177.6 371 32.1
Haze_08005 Corylus avellana HOM05D006592 ORTHO05D008122 8.3e-42 176.0 499 28.5
CiPaw.11G105000 Carya illinoinensis HOM05D006592 ORTHO05D008122 1.4e-41 175.3 513 28.7
QL02p100032 Quercus lobata HOM05D006592 ORTHO05D008122 1.4e-41 175.3 472 29.4
FvH4_3g41920 Fragaria vesca HOM05D006592 ORTHO05D008122 1.8e-41 174.9 496 29.2
MD07G1026800 Malus domestica HOM05D006592 ORTHO05D008122 2.4e-41 174.5 483 27.3
RcHm_v2.0_Chr1g0331171 Rosa chinensis HOM05D006592 ORTHO05D008122 1.2e-40 172.2 510 28.8
vmacro05080 Vaccinium macrocarpon HOM05D006592 ORTHO05D008122 1.2e-40 172.2 499 27.1
FAN11G2031 Fragaria x ananassa HOM05D006592 ORTHO05D008122 2.0e-40 171.4 496 29.0
Pp3c1_19230 Physcomitrium patens HOM05D006592 ORTHO05D008122 2.7e-40 171.0 454 30.6
Rhsim07G0174700 Rhododendron simsii HOM05D006592 ORTHO05D008122 2.7e-40 171.0 484 28.3
ATR0829G075 Amborella trichopoda HOM05D006592 ORTHO05D008122 3.5e-40 170.6 513 26.1
Zm00001eb430350 Zea mays HOM05D006592 ORTHO05D008122 3.5e-40 170.6 470 28.7
Prupe.2G060600 Prunus persica HOM05D006592 ORTHO05D008122 5.9e-40 169.9 487 27.9
FAN25G1190 Fragaria x ananassa HOM05D006592 ORTHO05D008122 7.7e-40 169.5 496 28.4
PSO782G0843 Papaver somniferum HOM05D006592 ORTHO05D008122 1.3e-39 168.7 492 27.6
CBR_g37675 Chara braunii HOM05D006592 ORTHO05D008122 1.7e-39 168.3 297 35.4
MELO3C010544.2 Cucumis melo HOM05D006592 ORTHO05D008122 2.3e-39 167.9 496 28.4
TAR622G1375 Trochodendron aralioides HOM05D006592 ORTHO05D008122 2.3e-39 167.9 489 27.2
CBR_g19872 Chara braunii HOM05D006592 ORTHO05D008122 2.9e-39 167.5 297 35.4
Mapoly0006s0240 Marchantia polymorpha HOM05D006592 ORTHO05D008122 2.9e-39 167.5 372 33.3
PSO063G4459 Papaver somniferum HOM05D006592 ORTHO05D008122 3.8e-39 167.2 492 27.4
Cre06.g292100 Chlamydomonas reinhardtii HOM05D006592 ORTHO05D008122 5.0e-39 166.8 439 31.9
Actinidia29329 Actinidia chinensis HOM05D006592 ORTHO05D008122 8.6e-39 166.0 482 27.2
Eucgr.E01202 Eucalyptus grandis HOM05D006592 ORTHO05D008122 1.5e-38 165.2 387 30.2
Glyma.16G075200 Glycine max HOM05D006592 ORTHO05D008122 1.9e-38 164.9 539 26.7
Cc00_g08640 Coffea canephora HOM05D006592 ORTHO05D008122 4.2e-38 163.7 384 30.5
FAN21G3043 Fragaria x ananassa HOM05D006592 ORTHO05D008122 4.2e-38 163.7 365 32.1
GSVIVG01036935001 Vitis vinifera HOM05D006592 ORTHO05D008122 4.2e-38 163.7 483 27.7
CsaV3_4G037940 Cucumis sativus L. HOM05D006592 ORTHO05D008122 5.5e-38 163.3 495 27.9
Os04g0602200 Oryza sativa ssp. japonica HOM05D006592 ORTHO05D008122 9.5e-38 162.5 370 30.8
Hund14317 Selenicereus undatus HOM05D006592 ORTHO05D008122 9.5e-38 162.5 504 27.0
DCAR_028262 Daucus carota HOM05D006592 ORTHO05D008122 1.6e-37 161.8 517 25.5
Gorai.004G175600 Gossypium raimondii HOM05D006592 ORTHO05D008122 1.6e-37 161.8 474 27.0
Manes.17G005500 Manihot esculenta HOM05D006592 ORTHO05D008122 2.8e-37 161.0 483 26.3
COL.COLO4_16712 Corchorus olitorius HOM05D006592 ORTHO05D008122 3.6e-37 160.6 377 28.9
Gohir.D08G168300 Gossypium hirsutum HOM05D006592 ORTHO05D008122 4.7e-37 160.2 486 26.3
Hma1.2p1_1256F.1_g270670 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 4.7e-37 160.2 496 27.8
Lsat_1_v5_gn_5_55220 Lactuca sativa HOM05D006592 ORTHO05D008122 4.7e-37 160.2 483 27.1
Sabra03G0072100 Salix brachista HOM05D006592 ORTHO05D008122 4.7e-37 160.2 470 27.4
AT1G31410 Arabidopsis thaliana HOM05D006592 ORTHO05D008122 6.1e-37 159.8 485 28.0
Ca_22475_v3 Cicer arietinum L. HOM05D006592 ORTHO05D008122 6.1e-37 159.8 496 26.0
Phvul.003G276900 Phaseolus vulgaris HOM05D006592 ORTHO05D008122 6.1e-37 159.8 369 29.8
Dinv37459 Davidia involucrata HOM05D006592 ORTHO05D008122 8.0e-37 159.5 391 29.9
arahy.Tifrunner.gnm1.ann1.35U8WI Arachis hypogaea HOM05D006592 ORTHO05D008122 1.0e-36 159.1 381 28.3
AUR62007438 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.0e-36 159.1 384 29.4
THA.LOC104814375 Tarenaya hassleriana HOM05D006592 ORTHO05D008122 1.0e-36 159.1 472 26.7
arahy.Tifrunner.gnm1.ann1.6CV8VS Arachis hypogaea HOM05D006592 ORTHO05D008122 1.4e-36 158.7 383 28.2
Thecc.03G323800 Theobroma cacao HOM05D006592 ORTHO05D008122 1.4e-36 158.7 482 25.5
Ah.02g117360 Amaranthus hybridus HOM05D006592 ORTHO05D008122 1.8e-36 158.3 370 30.0
AL1G49640 Arabidopsis lyrata HOM05D006592 ORTHO05D008122 1.8e-36 158.3 402 29.4
Medtr8g071820 Medicago truncatula HOM05D006592 ORTHO05D008122 2.3e-36 157.9 483 26.1
A07p09410 Brassica napus HOM05D006592 ORTHO05D008122 3.0e-36 157.5 403 28.3
Duzib084G0624 Durio zibethinus HOM05D006592 ORTHO05D008122 4.0e-36 157.1 336 31.0
EL10Ac5g11887 Beta vulgaris HOM05D006592 ORTHO05D008122 5.2e-36 156.8 369 30.1
Thhalv10007328m.g Eutrema salsugineum HOM05D006592 ORTHO05D008122 5.2e-36 156.8 383 29.2
Atru.chr6.2117 Acer truncatum HOM05D006592 ORTHO05D008122 8.9e-36 156.0 496 25.4
Carub.0001s2983 Capsella rubella HOM05D006592 ORTHO05D008122 8.9e-36 156.0 384 30.2
HanXRQChr13g0411871 Helianthus annuus HOM05D006592 ORTHO05D008122 8.9e-36 156.0 381 29.1
Sp1g27210 Schrenkiella parvula HOM05D006592 ORTHO05D008122 1.5e-35 155.2 402 29.4
ClCG11G016240 Citrullus lanatus HOM05D006592 ORTHO05D008122 2.0e-35 154.8 381 30.2
SGA_v2.0_scaffold144G35824 Striga asiatica HOM05D006592 ORTHO05D008122 2.0e-35 154.8 482 26.3
TPR.G16815 Trifolium pratense HOM05D006592 ORTHO05D008122 2.0e-35 154.8 503 25.8
C07p14480 Brassica napus HOM05D006592 ORTHO05D008122 3.4e-35 154.1 487 26.3
BolC7t41947H Brassica oleracea HOM05D006592 ORTHO05D008122 5.7e-35 153.3 405 28.6
unitig_899.g15474 Utricularia gibba HOM05D006592 ORTHO05D008122 5.7e-35 153.3 532 25.4
BraA07t28736Z Brassica rapa HOM05D006592 ORTHO05D008122 7.5e-35 152.9 403 28.5
BcaB03g13796 Brassica carinata HOM05D006592 ORTHO05D008122 1.3e-34 152.1 278 33.5
Lalb_Chr05g0229391 Lupinus albus HOM05D006592 ORTHO05D008122 1.7e-34 151.8 489 26.6
PGR042G2051 Punica granatum HOM05D006592 ORTHO05D008122 1.7e-34 151.8 380 30.0
ECA240G2178 Erigeron canadensis HOM05D006592 ORTHO05D008122 2.8e-34 151.0 403 28.0
TWI60G0674 Tripterygium wilfordii HOM05D006592 ORTHO05D008122 2.8e-34 151.0 273 33.3
Migut.E01392 Erythranthe guttata HOM05D006592 ORTHO05D008122 3.7e-34 150.6 488 26.4
Solyc08g005860.3 Solanum lycopersicum HOM05D006592 ORTHO05D008122 1.1e-33 149.1 378 28.3
PGSC0003DMG400024141 Solanum tuberosum HOM05D006592 ORTHO05D008122 1.1e-33 149.1 378 28.3
Sopen08g001820 Solanum pennellii HOM05D006592 ORTHO05D008122 1.4e-33 148.7 378 28.3
VMungo0251G2096 Vigna mungo HOM05D006592 ORTHO05D008122 4.1e-33 147.1 274 32.1
CDE11G0624 Ceratophyllum demersum HOM05D006592 ORTHO05D008122 7.0e-33 146.4 368 29.9
CAN.G561.14 Capsicum annuum HOM05D006592 ORTHO05D008122 9.2e-33 146.0 272 33.5
SalBow8G4832 Salvia bowleyana HOM05D006592 ORTHO05D008122 1.2e-32 145.6 405 27.2
Aqoxy7G04139 Aquilegia oxysepala HOM05D006592 ORTHO05D008122 1.6e-32 145.2 381 26.8
SalBow8G1786 Salvia bowleyana HOM05D006592 ORTHO05D008122 2.0e-32 144.8 405 27.2
Potri.003G105100 Populus trichocarpa HOM05D006592 ORTHO05D008122 2.7e-32 144.4 273 31.5
Aa31LG2G14540 Aethionema arabicum HOM05D006592 ORTHO05D008122 7.8e-32 142.9 415 27.0
PRCOL_00001501 Prasinoderma coloniale HOM05D006592 ORTHO05D008122 7.8e-32 142.9 420 30.5
Nitab4.5_0004477g0030 Nicotiana tabacum HOM05D006592 ORTHO05D008122 1.3e-31 142.1 277 33.2
Hma1.2p1_1046F.1_g251540 Hydrangea macrophylla HOM05D006592 ORTHO05D008122 1.7e-31 141.7 297 33.3
Peaxi162Scf00045g01236 Petunia axillaris HOM05D006592 ORTHO05D008122 2.3e-31 141.4 268 32.5
Glyma.16G106500 Glycine max HOM05D006592 ORTHO05D008122 1.1e-30 139.0 295 30.5
Nitab4.5_0000063g0390 Nicotiana tabacum HOM05D006592 ORTHO05D008122 4.3e-30 137.1 283 31.8
HPP92_015141 Vanilla planifolia HOM05D006592 ORTHO05D008122 4.3e-30 137.1 182 40.1
Psat4g109400 Pisum sativum HOM05D006592 ORTHO05D008122 6.1e-29 133.3 295 29.5
CARHR030900 Cardamine hirsuta HOM05D006592 ORTHO05D008122 6.8e-28 129.8 202 38.6
Gohir.A08G147100 Gossypium hirsutum HOM05D006592 ORTHO05D008122 1.2e-27 129.0 348 28.2
Oeu028120.2 Olea europaea HOM05D006592 ORTHO05D008122 1.5e-27 128.6 406 26.6
Sc01g0005980 Simmondsia chinensis HOM05D006592 ORTHO05D008122 3.7e-26 124.0 195 37.9
Nn1g09214 Nelumbo nucifera HOM05D006592 ORTHO05D008122 1.2e-24 119.0 318 29.9
CSS0028407 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.5e-22 112.1 267 30.0
Lj8A380T21 Lonicera japonica HOM05D006592 ORTHO05D008122 5.2e-20 103.6 238 30.7
AagrBONN_evm.TU.Sc2ySwM_117.3387 Anthoceros agrestis HOM05D006592 ORTHO05D008122 2.2e-18 98.2 220 31.8
CSS0043715 Camellia sinensis var. sinensis HOM05D006592 ORTHO05D008122 1.2e-16 92.4 252 29.8
Lj4g0008520 Lotus japonicus HOM05D006592 ORTHO05D008122 1.2e-16 92.4 239 28.9
AUR62027300 Chenopodium quinoa HOM05D006592 ORTHO05D008122 1.2e-13 82.4 92 43.5
Cpa.g.sc137.29 Carica papaya HOM05D006592 ORTHO05D008122 9.9e-11 72.8 105 40.0
MBI04_g30774_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 2.3e-07 61.6 224 23.7
MBI14_g31659_MAGBIO Magnolia biondii HOM05D006592 ORTHO05D008122 5.1e-07 60.5 96 37.5


User provided reference genes

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