Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G622 Micromonas commoda HOM05D003423 ORTHO05D003910 2.8e-176 622.1 369 100.0
AagrBONN_evm.TU.Sc2ySwM_228.5488 Anthoceros agrestis HOM05D003423 ORTHO05D003910 6.4e-40 169.1 180 52.2
CBR_g12763 Chara braunii HOM05D003423 ORTHO05D003910 2.4e-39 167.2 181 51.4
CAN.G790.42 Capsicum annuum HOM05D003423 ORTHO05D003910 1.0e-37 161.8 356 32.9
FvH4_6g37480 Fragaria vesca HOM05D003423 ORTHO05D003910 5.1e-37 159.5 176 50.0
Peaxi162Scf00038g02438 Petunia axillaris HOM05D003423 ORTHO05D003910 5.1e-37 159.5 179 49.7
Nitab4.5_0001691g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 8.7e-37 158.7 176 50.6
SalBow6G3752 Salvia bowleyana HOM05D003423 ORTHO05D003910 8.7e-37 158.7 176 50.0
Cc04_g00490 Coffea canephora HOM05D003423 ORTHO05D003910 1.1e-36 158.3 176 50.6
RcHm_v2.0_Chr2g0150321 Rosa chinensis HOM05D003423 ORTHO05D003910 1.5e-36 157.9 333 34.8
MELO3C009034.2 Cucumis melo HOM05D003423 ORTHO05D003910 2.5e-36 157.1 176 47.2
Prupe.3G168300 Prunus persica HOM05D003423 ORTHO05D003910 3.3e-36 156.8 176 50.6
Sabra08G0005700 Salix brachista HOM05D003423 ORTHO05D003910 3.3e-36 156.8 180 50.6
GSVIVG01014644001 Vitis vinifera HOM05D003423 ORTHO05D003910 3.3e-36 156.8 376 31.9
Eucgr.F03997 Eucalyptus grandis HOM05D003423 ORTHO05D003910 4.3e-36 156.4 179 48.6
PGSC0003DMG400009184 Solanum tuberosum HOM05D003423 ORTHO05D003910 4.3e-36 156.4 180 48.9
ClCG04G000610 Citrullus lanatus HOM05D003423 ORTHO05D003910 7.3e-36 155.6 173 48.0
Nitab4.5_0002885g0030 Nicotiana tabacum HOM05D003423 ORTHO05D003910 7.3e-36 155.6 176 49.4
Lsat_1_v5_gn_1_26441 Lactuca sativa HOM05D003423 ORTHO05D003910 9.6e-36 155.2 177 49.2
Manes.15G061600 Manihot esculenta HOM05D003423 ORTHO05D003910 9.6e-36 155.2 180 49.4
Mapoly0109s0050 Marchantia polymorpha HOM05D003423 ORTHO05D003910 9.6e-36 155.2 182 50.5
Ciclev10027497m.g Citrus clementina HOM05D003423 ORTHO05D003910 1.6e-35 154.5 180 48.3
Pp3c5_3280 Physcomitrium patens HOM05D003423 ORTHO05D003910 2.1e-35 154.1 176 50.0
Sed0010386 Sechium edule HOM05D003423 ORTHO05D003910 2.1e-35 154.1 176 47.7
Hund05673 Selenicereus undatus HOM05D003423 ORTHO05D003910 2.8e-35 153.7 176 48.9
Atru.chr1.2766 Acer truncatum HOM05D003423 ORTHO05D003910 6.2e-35 152.5 176 47.7
Aqoxy2G03521 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 6.2e-35 152.5 180 47.8
HanXRQChr09g0277351 Helianthus annuus HOM05D003423 ORTHO05D003910 6.2e-35 152.5 164 50.0
Lj3g0006153 Lotus japonicus HOM05D003423 ORTHO05D003910 8.1e-35 152.1 180 50.0
PGR102G0515 Punica granatum HOM05D003423 ORTHO05D003910 8.1e-35 152.1 176 48.3
CiPaw.12G136700 Carya illinoinensis HOM05D003423 ORTHO05D003910 1.1e-34 151.8 180 48.3
FAN02G3068 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.1e-34 151.8 183 48.6
vmacro18704 Vaccinium macrocarpon HOM05D003423 ORTHO05D003910 1.1e-34 151.8 176 48.3
VMungo1080G0425 Vigna mungo HOM05D003423 ORTHO05D003910 1.4e-34 151.4 180 48.3
Hma1.2p1_0090F.1_g045620 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 1.8e-34 151.0 179 46.9
Duzib213G0099 Durio zibethinus HOM05D003423 ORTHO05D003910 2.4e-34 150.6 180 48.3
FAN09G1601 Fragaria x ananassa HOM05D003423 ORTHO05D003910 2.4e-34 150.6 183 48.1
Oeu051387.2 Olea europaea HOM05D003423 ORTHO05D003910 2.4e-34 150.6 180 47.2
Potri.008G009700 Populus trichocarpa HOM05D003423 ORTHO05D003910 2.4e-34 150.6 180 48.9
EL10Ac7g18155 Beta vulgaris HOM05D003423 ORTHO05D003910 3.1e-34 150.2 176 47.2
FAN14G2430 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.1e-34 150.2 179 48.0
Atru.chr2.3667 Acer truncatum HOM05D003423 ORTHO05D003910 4.0e-34 149.8 183 49.7
Nn1g07481 Nelumbo nucifera HOM05D003423 ORTHO05D003910 4.0e-34 149.8 179 47.5
RcHm_v2.0_Chr5g0054021 Rosa chinensis HOM05D003423 ORTHO05D003910 4.0e-34 149.8 182 50.0
SGA_v2.0_scaffold122G33294 Striga asiatica HOM05D003423 ORTHO05D003910 4.0e-34 149.8 180 46.7
BraA08t32113Z Brassica rapa HOM05D003423 ORTHO05D003910 5.3e-34 149.4 180 47.8
Eucgr.F02068 Eucalyptus grandis HOM05D003423 ORTHO05D003910 5.3e-34 149.4 178 49.4
TWI39G0701 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 5.3e-34 149.4 180 48.3
TAR624G0752 Trochodendron aralioides HOM05D003423 ORTHO05D003910 5.3e-34 149.4 179 47.5
CsaV3_7G018340 Cucumis sativus L. HOM05D003423 ORTHO05D003910 9.0e-34 148.7 176 47.2
Lj1A888G39 Lonicera japonica HOM05D003423 ORTHO05D003910 9.0e-34 148.7 181 48.6
MD11G1201700 Malus domestica HOM05D003423 ORTHO05D003910 9.0e-34 148.7 182 50.0
QL08p004807 Quercus lobata HOM05D003423 ORTHO05D003910 9.0e-34 148.7 180 47.8
vmacro09657 Vaccinium macrocarpon HOM05D003423 ORTHO05D003910 9.0e-34 148.7 180 47.8
Rhsim04G0013800 Rhododendron simsii HOM05D003423 ORTHO05D003910 1.2e-33 148.3 180 47.2
SMO361G0751 Selaginella moellendorffii HOM05D003423 ORTHO05D003910 1.2e-33 148.3 180 46.7
Actinidia33816 Actinidia chinensis HOM05D003423 ORTHO05D003910 1.5e-33 147.9 179 46.4
QL05p083582 Quercus lobata HOM05D003423 ORTHO05D003910 1.5e-33 147.9 176 47.2
QL05p083734 Quercus lobata HOM05D003423 ORTHO05D003910 1.5e-33 147.9 176 47.2
PGSC0003DMG400029797 Solanum tuberosum HOM05D003423 ORTHO05D003910 1.5e-33 147.9 177 49.2
TAR626G1285 Trochodendron aralioides HOM05D003423 ORTHO05D003910 1.5e-33 147.9 179 47.5
Glyma.18G078800 Glycine max HOM05D003423 ORTHO05D003910 2.0e-33 147.5 181 49.2
Prupe.4G239900 Prunus persica HOM05D003423 ORTHO05D003910 2.0e-33 147.5 177 50.8
BraA08t32074Z Brassica rapa HOM05D003423 ORTHO05D003910 2.6e-33 147.1 180 47.8
ECA236G2484 Erigeron canadensis HOM05D003423 ORTHO05D003910 2.6e-33 147.1 394 29.7
Medtr3g058580 Medicago truncatula HOM05D003423 ORTHO05D003910 3.4e-33 146.7 181 48.6
A08p00550 Brassica napus HOM05D003423 ORTHO05D003910 4.5e-33 146.4 354 31.9
FAN05G4329 Fragaria x ananassa HOM05D003423 ORTHO05D003910 4.5e-33 146.4 179 46.9
Gohir.A04G002900 Gossypium hirsutum HOM05D003423 ORTHO05D003910 4.5e-33 146.4 180 47.2
Lj9A540T81 Lonicera japonica HOM05D003423 ORTHO05D003910 4.5e-33 146.4 179 45.8
Sp1g41520 Schrenkiella parvula HOM05D003423 ORTHO05D003910 4.5e-33 146.4 181 48.1
MELO3C024918.2 Cucumis melo HOM05D003423 ORTHO05D003910 5.8e-33 146.0 176 47.2
FvH4_3g29470 Fragaria vesca HOM05D003423 ORTHO05D003910 5.8e-33 146.0 182 48.4
Manes.03G139900 Manihot esculenta HOM05D003423 ORTHO05D003910 5.8e-33 146.0 179 45.3
CSS0034763 Camellia sinensis var. sinensis HOM05D003423 ORTHO05D003910 7.6e-33 145.6 179 46.4
CSS0038448 Camellia sinensis var. sinensis HOM05D003423 ORTHO05D003910 7.6e-33 145.6 179 46.4
ATR0580G345 Amborella trichopoda HOM05D003423 ORTHO05D003910 9.9e-33 145.2 180 48.9
C03p93330 Brassica napus HOM05D003423 ORTHO05D003910 9.9e-33 145.2 177 48.0
Ca_00986_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 9.9e-33 145.2 176 47.2
Ca_01000_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 9.9e-33 145.2 176 47.2
HanXRQChr11g0333391 Helianthus annuus HOM05D003423 ORTHO05D003910 9.9e-33 145.2 177 48.0
VMungo0540G0232 Vigna mungo HOM05D003423 ORTHO05D003910 9.9e-33 145.2 181 48.6
Thecc.07G016500 Theobroma cacao HOM05D003423 ORTHO05D003910 1.3e-32 144.8 180 47.2
C03p92860 Brassica napus HOM05D003423 ORTHO05D003910 1.7e-32 144.4 177 48.0
BolC3t21592H Brassica oleracea HOM05D003423 ORTHO05D003910 1.7e-32 144.4 177 48.0
ClCG09G021170 Citrullus lanatus HOM05D003423 ORTHO05D003910 1.7e-32 144.4 176 46.0
Dinv10321 Davidia involucrata HOM05D003423 ORTHO05D003910 1.7e-32 144.4 176 46.6
Gohir.D13G137300 Gossypium hirsutum HOM05D003423 ORTHO05D003910 1.7e-32 144.4 180 47.2
Gorai.010G207500 Gossypium raimondii HOM05D003423 ORTHO05D003910 1.7e-32 144.4 180 47.2
Gorai.013G153900 Gossypium raimondii HOM05D003423 ORTHO05D003910 1.7e-32 144.4 180 47.2
Potri.011G092900 Populus trichocarpa HOM05D003423 ORTHO05D003910 1.7e-32 144.4 176 47.7
CiPaw.11G202400 Carya illinoinensis HOM05D003423 ORTHO05D003910 2.2e-32 144.1 180 46.1
AL1G64060 Arabidopsis lyrata HOM05D003423 ORTHO05D003910 2.9e-32 143.7 182 47.3
BolC3t21631H Brassica oleracea HOM05D003423 ORTHO05D003910 2.9e-32 143.7 180 47.2
CANSAT11G1165 Cannabis sativa HOM05D003423 ORTHO05D003910 3.8e-32 143.3 176 44.9
Nitab4.5_0000163g0280 Nicotiana tabacum HOM05D003423 ORTHO05D003910 3.8e-32 143.3 177 49.2
MSTRG.14479 Avicennia marina HOM05D003423 ORTHO05D003910 4.9e-32 142.9 177 49.7
Oeu041432.1 Olea europaea HOM05D003423 ORTHO05D003910 4.9e-32 142.9 180 45.0
MBI16_g46430_MAGBIO Magnolia biondii HOM05D003423 ORTHO05D003910 6.4e-32 142.5 179 45.3
THA.LOC104810286 Tarenaya hassleriana HOM05D003423 ORTHO05D003910 6.4e-32 142.5 176 46.0
Actinidia37163 Actinidia chinensis HOM05D003423 ORTHO05D003910 8.4e-32 142.1 176 47.2
Hma1.2p1_0036F.1_g022545 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 8.4e-32 142.1 181 47.0
Hma1.2p1_0036F.1_g022550 Hydrangea macrophylla HOM05D003423 ORTHO05D003910 8.4e-32 142.1 181 47.0
Lalb_Chr15g0081991 Lupinus albus HOM05D003423 ORTHO05D003910 8.4e-32 142.1 177 46.9
Aa31LG10G260 Aethionema arabicum HOM05D003423 ORTHO05D003910 1.1e-31 141.7 365 32.1
AT1G55915 Arabidopsis thaliana HOM05D003423 ORTHO05D003910 1.1e-31 141.7 365 31.2
Lsat_1_v5_gn_4_89280 Lactuca sativa HOM05D003423 ORTHO05D003910 1.1e-31 141.7 203 42.4
Phvul.006G055600 Phaseolus vulgaris HOM05D003423 ORTHO05D003910 1.4e-31 141.4 181 47.5
TPR.G30741 Trifolium pratense HOM05D003423 ORTHO05D003910 1.4e-31 141.4 177 47.5
BcaC01g01534 Brassica carinata HOM05D003423 ORTHO05D003910 1.9e-31 141.0 177 46.9
Solyc12g015660.2 Solanum lycopersicum HOM05D003423 ORTHO05D003910 1.9e-31 141.0 174 47.7
Sopen12g007570 Solanum pennellii HOM05D003423 ORTHO05D003910 1.9e-31 141.0 174 47.7
CDE04G0040 Ceratophyllum demersum HOM05D003423 ORTHO05D003910 2.4e-31 140.6 180 45.0
Ca_12436_v3 Cicer arietinum L. HOM05D003423 ORTHO05D003910 2.4e-31 140.6 180 45.0
DCAR_017083 Daucus carota HOM05D003423 ORTHO05D003910 2.4e-31 140.6 177 45.8
Os06g0191200 Oryza sativa ssp. japonica HOM05D003423 ORTHO05D003910 2.4e-31 140.6 182 47.3
PSO782G1032 Papaver somniferum HOM05D003423 ORTHO05D003910 2.4e-31 140.6 180 46.1
Hund01908 Selenicereus undatus HOM05D003423 ORTHO05D003910 2.4e-31 140.6 181 44.8
FAN11G0659 Fragaria x ananassa HOM05D003423 ORTHO05D003910 3.2e-31 140.2 182 47.8
Rhsim08G0246600 Rhododendron simsii HOM05D003423 ORTHO05D003910 4.2e-31 139.8 176 45.5
Thhalv10011589m.g Eutrema salsugineum HOM05D003423 ORTHO05D003910 5.4e-31 139.4 161 47.8
Aqoxy6G02866 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 7.1e-31 139.0 181 44.2
arahy.Tifrunner.gnm1.ann1.HUB5JH Arachis hypogaea HOM05D003423 ORTHO05D003910 7.1e-31 139.0 177 47.5
TWI38G0990 Tripterygium wilfordii HOM05D003423 ORTHO05D003910 9.3e-31 138.7 177 48.0
arahy.Tifrunner.gnm1.ann1.08VBYE Arachis hypogaea HOM05D003423 ORTHO05D003910 1.2e-30 138.3 177 47.5
FAN21G0447 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.2e-30 138.3 181 47.0
arahy.Tifrunner.gnm1.ann1.FCEI8S Arachis hypogaea HOM05D003423 ORTHO05D003910 1.6e-30 137.9 177 47.5
Lj6g0015704 Lotus japonicus HOM05D003423 ORTHO05D003910 1.6e-30 137.9 177 47.5
PSO063G5220 Papaver somniferum HOM05D003423 ORTHO05D003910 2.1e-30 137.5 180 45.6
Migut.H01764 Erythranthe guttata HOM05D003423 ORTHO05D003910 2.7e-30 137.1 171 48.5
HPP92_018337 Vanilla planifolia HOM05D003423 ORTHO05D003910 2.7e-30 137.1 181 44.8
AUR62025667 Chenopodium quinoa HOM05D003423 ORTHO05D003910 4.6e-30 136.3 188 42.6
CARHR045630 Cardamine hirsuta HOM05D003423 ORTHO05D003910 6.0e-30 136.0 177 46.3
unitig_27.g25148 Utricularia gibba HOM05D003423 ORTHO05D003910 6.0e-30 136.0 346 31.5
Haze_09806 Corylus avellana HOM05D003423 ORTHO05D003910 1.3e-29 134.8 176 45.5
EL10Ac4g07604 Beta vulgaris HOM05D003423 ORTHO05D003910 3.0e-29 133.7 371 30.7
FAN25G2240 Fragaria x ananassa HOM05D003423 ORTHO05D003910 1.1e-28 131.7 182 46.2
Medtr2g105670 Medicago truncatula HOM05D003423 ORTHO05D003910 1.5e-28 131.3 122 51.6
SHI26527 Sapria himalayana HOM05D003423 ORTHO05D003910 1.5e-28 131.3 177 45.2
SGA_v2.0_scaffold42G16002 Striga asiatica HOM05D003423 ORTHO05D003910 1.5e-28 131.3 177 46.3
AUR62001338 Chenopodium quinoa HOM05D003423 ORTHO05D003910 3.3e-28 130.2 188 41.5
Sc16g0007990 Simmondsia chinensis HOM05D003423 ORTHO05D003910 3.3e-28 130.2 353 29.2
Ah.06g181290 Amaranthus hybridus HOM05D003423 ORTHO05D003910 7.4e-28 129.0 391 29.4
Peaxi162Scf00955g00007 Petunia axillaris HOM05D003423 ORTHO05D003910 1.3e-27 128.3 181 45.3
Aqoxy102s004 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 2.4e-26 124.0 176 41.5
Cre07.g333850 Chlamydomonas reinhardtii HOM05D003423 ORTHO05D003910 4.0e-26 123.2 184 42.9
DCAR_007666 Daucus carota HOM05D003423 ORTHO05D003910 6.9e-26 122.5 176 41.5
PRCOL_00000756 Prasinoderma coloniale HOM05D003423 ORTHO05D003910 9.0e-26 122.1 176 42.6
Nn3g19300 Nelumbo nucifera HOM05D003423 ORTHO05D003910 2.0e-25 120.9 150 47.3
MD09G1157700 Malus domestica HOM05D003423 ORTHO05D003910 5.8e-25 119.4 148 48.6
SEGI_36313 Sequoiadendron giganteum HOM05D003423 ORTHO05D003910 2.2e-24 117.5 110 51.8
Nitab4.5_0002517g0010 Nicotiana tabacum HOM05D003423 ORTHO05D003910 1.1e-23 115.2 177 44.1
Carub.0001s4451 Capsella rubella HOM05D003423 ORTHO05D003910 7.1e-23 112.5 150 44.7
Ciclev10010194m.g Citrus clementina HOM05D003423 ORTHO05D003910 1.2e-22 111.7 161 42.9
Cc05_g14820 Coffea canephora HOM05D003423 ORTHO05D003910 3.0e-21 107.1 179 40.2
Zm00001eb374280 Zea mays HOM05D003423 ORTHO05D003910 1.1e-20 105.1 180 37.8
Cpa.g.sc12.172 Carica papaya HOM05D003423 ORTHO05D003910 3.3e-20 103.6 131 47.3
AUR62017070 Chenopodium quinoa HOM05D003423 ORTHO05D003910 6.2e-19 99.4 181 37.0
Lj6g0002743 Lotus japonicus HOM05D003423 ORTHO05D003910 1.2e-17 95.1 144 44.4
Cfa022425 Carpinus fangiana HOM05D003423 ORTHO05D003910 1.5e-17 94.7 172 40.1
AUR62036422 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.0e-17 94.4 134 41.0
AUR62036428 Chenopodium quinoa HOM05D003423 ORTHO05D003910 2.6e-17 94.0 135 40.7
MSTRG.22510 Avicennia marina HOM05D003423 ORTHO05D003910 8.4e-16 89.0 96 53.1
Gohir.D06G176332 Gossypium hirsutum HOM05D003423 ORTHO05D003910 2.5e-15 87.4 108 46.3
Sabra10G0194100 Salix brachista HOM05D003423 ORTHO05D003910 2.5e-15 87.4 160 39.4
Actinidia21857 Actinidia chinensis HOM05D003423 ORTHO05D003910 9.3e-15 85.5 96 52.1
Gohir.A04G133100 Gossypium hirsutum HOM05D003423 ORTHO05D003910 9.3e-15 85.5 87 50.6
Gorai.010G207400 Gossypium raimondii HOM05D003423 ORTHO05D003910 2.1e-14 84.3 108 45.4
Dinv37806 Davidia involucrata HOM05D003423 ORTHO05D003910 2.7e-14 84.0 92 51.1
Psat7g121520 Pisum sativum HOM05D003423 ORTHO05D003910 2.7e-14 84.0 96 50.0
Potri.010G249400 Populus trichocarpa HOM05D003423 ORTHO05D003910 3.5e-14 83.6 163 39.3
Gohir.A06G044200 Gossypium hirsutum HOM05D003423 ORTHO05D003910 4.6e-14 83.2 92 50.0
Sed0002105 Sechium edule HOM05D003423 ORTHO05D003910 6.1e-14 82.8 92 50.0
Aqoxy2G00648 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 3.0e-13 80.5 179 34.6
Aqoxy6G00167 Aquilegia oxysepala HOM05D003423 ORTHO05D003910 7.7e-09 65.9 99 34.3
AUR62028647 Chenopodium quinoa HOM05D003423 ORTHO05D003910 1.0e-08 65.5 123 34.1
MCO07G103 Micromonas commoda HOM05D006530 ORTHO05D008283 1.1e-07 62.0 146 34.9
EL10Ac8g20245 Beta vulgaris HOM05D003423 ORTHO05D003910 1.2e-06 58.5 81 39.5


User provided reference genes

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