Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G598 Micromonas commoda HOM05D004167 ORTHO05D005012 1.1e-189 666.4 321 100.0
Cfa024819 Carpinus fangiana HOM05D004167 ORTHO05D005012 8.1e-15 85.5 291 28.2
HPP92_020200 Vanilla planifolia HOM05D004167 ORTHO05D005012 1.8e-14 84.3 294 26.9
Zm00001eb062720 Zea mays HOM05D004167 ORTHO05D005012 2.4e-14 84.0 291 27.5
Os03g0821800 Oryza sativa ssp. japonica HOM05D004167 ORTHO05D005012 4.0e-14 83.2 291 27.1
Aqoxy5G03379 Aquilegia oxysepala HOM05D004167 ORTHO05D005012 1.5e-13 81.3 290 25.9
MBI14_g20108_MAGBIO Magnolia biondii HOM05D004167 ORTHO05D005012 2.6e-13 80.5 292 26.7
ClCG07G003290 Citrullus lanatus HOM05D004167 ORTHO05D005012 4.5e-13 79.7 285 27.4
Sed0027549 Sechium edule HOM05D004167 ORTHO05D005012 4.5e-13 79.7 278 25.9
Cfa001475 Carpinus fangiana HOM05D004167 ORTHO05D005012 9.9e-13 78.6 303 25.4
Gorai.011G260700 Gossypium raimondii HOM05D004167 ORTHO05D005012 9.9e-13 78.6 291 25.8
ECA232G2013 Erigeron canadensis HOM05D004167 ORTHO05D005012 1.3e-12 78.2 285 27.4
Gohir.D10G228300 Gossypium hirsutum HOM05D004167 ORTHO05D005012 1.3e-12 78.2 291 25.8
ATR0559G365 Amborella trichopoda HOM05D004167 ORTHO05D005012 2.2e-12 77.4 294 24.8
MELO3C023850.2 Cucumis melo HOM05D004167 ORTHO05D005012 2.2e-12 77.4 283 26.9
Eucgr.G02933 Eucalyptus grandis HOM05D004167 ORTHO05D005012 2.2e-12 77.4 292 23.3
PGR142G3800 Punica granatum HOM05D004167 ORTHO05D005012 4.9e-12 76.3 292 24.0
GSVIVG01016551001 Vitis vinifera HOM05D004167 ORTHO05D005012 6.4e-12 75.9 292 26.0
SEGI_18748 Sequoiadendron giganteum HOM05D004167 ORTHO05D005012 1.1e-11 75.1 293 25.9
PSO210G3999 Papaver somniferum HOM05D004167 ORTHO05D005012 1.4e-11 74.7 293 24.2
QL08p059807 Quercus lobata HOM05D004167 ORTHO05D005012 1.4e-11 74.7 292 26.4
CiPaw.02G183800 Carya illinoinensis HOM05D004167 ORTHO05D005012 1.9e-11 74.3 292 23.6
Ciclev10032053m.g Citrus clementina HOM05D004167 ORTHO05D005012 1.9e-11 74.3 292 27.1
Sed0007402 Sechium edule HOM05D004167 ORTHO05D005012 1.9e-11 74.3 287 25.4
PSO210G2827 Papaver somniferum HOM05D004167 ORTHO05D005012 2.4e-11 73.9 293 24.2
Potri.008G055700 Populus trichocarpa HOM05D004167 ORTHO05D005012 2.4e-11 73.9 292 26.0
CsaV3_5G026660 Cucumis sativus L. HOM05D004167 ORTHO05D005012 3.2e-11 73.6 286 23.8
Nn2g10367 Nelumbo nucifera HOM05D004167 ORTHO05D005012 3.2e-11 73.6 292 25.3
Gohir.D05G301300 Gossypium hirsutum HOM05D004167 ORTHO05D005012 4.2e-11 73.2 292 25.7
Potri.010G204000 Populus trichocarpa HOM05D004167 ORTHO05D005012 4.2e-11 73.2 294 26.2
Atru.chr12.453 Acer truncatum HOM05D004167 ORTHO05D005012 7.1e-11 72.4 292 24.7
Atru.chr12.475 Acer truncatum HOM05D004167 ORTHO05D005012 7.1e-11 72.4 292 24.7
TWI15G0568 Tripterygium wilfordii HOM05D004167 ORTHO05D005012 9.3e-11 72.0 292 25.0
Manes.07G116100 Manihot esculenta HOM05D004167 ORTHO05D005012 2.1e-10 70.9 292 24.7
Cc02_g07870 Coffea canephora HOM05D004167 ORTHO05D005012 2.7e-10 70.5 286 23.8
Duzib114G0485 Durio zibethinus HOM05D004167 ORTHO05D005012 3.5e-10 70.1 222 29.3
TAR633G1670 Trochodendron aralioides HOM05D004167 ORTHO05D005012 4.6e-10 69.7 222 28.4
CANSAT56G0736 Cannabis sativa HOM05D004167 ORTHO05D005012 6.0e-10 69.3 292 22.9
Dinv26013 Davidia involucrata HOM05D004167 ORTHO05D005012 1.0e-09 68.6 220 28.6
Cpa.g.sc1.403 Carica papaya HOM05D004167 ORTHO05D005012 2.3e-09 67.4 298 23.8
CiPaw.01G287300 Carya illinoinensis HOM05D004167 ORTHO05D005012 3.0e-09 67.0 290 24.8
Lj4g0024263 Lotus japonicus HOM05D004063 ORTHO05D005326 6.7e-09 65.9 196 29.6
Duzib106G0246 Durio zibethinus HOM05D004167 ORTHO05D005012 8.7e-09 65.5 220 26.8
CsaV3_5G008030 Cucumis sativus L. HOM05D004167 ORTHO05D005012 3.3e-08 63.5 186 30.1
DCAR_003678 Daucus carota HOM05D004063 ORTHO05D005326 9.6e-08 62.0 207 30.0
Gohir.A10G218700 Gossypium hirsutum HOM05D004167 ORTHO05D005012 1.3e-07 61.6 281 23.1
CDE05G0316 Ceratophyllum demersum HOM05D004063 ORTHO05D005326 9.0e-06 55.5 208 28.8


User provided reference genes

Program Settings