Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G574 Micromonas commoda HOM05D007061 ORTHO05D009017 1.2e-261 906.0 455 100.0
ECA240G0752 Erigeron canadensis HOM05D007061 ORTHO05D009017 2.4e-81 307.0 457 41.1
HanXRQChr03g0080291 Helianthus annuus HOM05D007061 ORTHO05D009017 4.6e-80 302.8 456 40.8
Aa31LG10G30 Aethionema arabicum HOM05D007061 ORTHO05D009017 6.0e-80 302.4 456 40.6
TAR627G0473 Trochodendron aralioides HOM05D007061 ORTHO05D009017 5.1e-79 299.3 456 40.1
Glyma.08G234700 Glycine max HOM05D007061 ORTHO05D009017 8.7e-79 298.5 457 38.7
THA.LOC104810275 Tarenaya hassleriana HOM05D007061 ORTHO05D009017 8.7e-79 298.5 456 39.9
Actinidia24658 Actinidia chinensis HOM05D007061 ORTHO05D009017 1.1e-78 298.1 450 40.9
A05p26620 Brassica napus HOM05D007061 ORTHO05D009017 2.5e-78 297.0 456 40.1
BraA05t21537Z Brassica rapa HOM05D007061 ORTHO05D009017 2.5e-78 297.0 456 40.1
Thhalv10011478m.g Eutrema salsugineum HOM05D007061 ORTHO05D009017 3.3e-78 296.6 456 39.3
Pp3c22_13410 Physcomitrium patens HOM05D007061 ORTHO05D009017 5.6e-78 295.8 456 40.1
unitig_37.g12195 Utricularia gibba HOM05D007061 ORTHO05D009017 5.6e-78 295.8 456 39.9
Ca_23083_v3 Cicer arietinum L. HOM05D007061 ORTHO05D009017 7.3e-78 295.4 456 38.4
TPR.G9404 Trifolium pratense HOM05D007061 ORTHO05D009017 9.6e-78 295.0 456 38.4
Potri.010G173800 Populus trichocarpa HOM05D007061 ORTHO05D009017 1.2e-77 294.7 456 38.8
Sp1g41850 Schrenkiella parvula HOM05D007061 ORTHO05D009017 2.1e-77 293.9 457 40.0
C05p41210 Brassica napus HOM05D007061 ORTHO05D009017 2.8e-77 293.5 457 39.8
Lalb_Chr03g0031881 Lupinus albus HOM05D007061 ORTHO05D009017 3.6e-77 293.1 457 38.7
PSO675G0660 Papaver somniferum HOM05D007061 ORTHO05D009017 3.6e-77 293.1 456 40.1
PRCOL_00003223 Prasinoderma coloniale HOM05D007061 ORTHO05D009017 3.6e-77 293.1 454 41.6
CANSAT35G1572 Cannabis sativa HOM05D007061 ORTHO05D009017 4.7e-77 292.7 456 38.6
Eucgr.K03462 Eucalyptus grandis HOM05D007061 ORTHO05D009017 4.7e-77 292.7 456 39.0
Gohir.D07G048400 Gossypium hirsutum HOM05D007061 ORTHO05D009017 8.1e-77 292.0 456 39.0
Gorai.001G051600 Gossypium raimondii HOM05D007061 ORTHO05D009017 8.1e-77 292.0 456 39.0
Lsat_1_v5_gn_7_70001 Lactuca sativa HOM05D007061 ORTHO05D009017 8.1e-77 292.0 457 40.5
Aqoxy2G00253 Aquilegia oxysepala HOM05D007061 ORTHO05D009017 1.1e-76 291.6 456 39.3
BcaB02g10820 Brassica carinata HOM05D007061 ORTHO05D009017 1.1e-76 291.6 457 40.3
Duzib213G0730 Durio zibethinus HOM05D007061 ORTHO05D009017 1.1e-76 291.6 456 37.9
Lj3g0003258 Lotus japonicus HOM05D007061 ORTHO05D009017 1.1e-76 291.6 457 38.7
PGR044G2241 Punica granatum HOM05D007061 ORTHO05D009017 1.1e-76 291.6 456 38.6
FvH4_3g14100 Fragaria vesca HOM05D007061 ORTHO05D009017 1.4e-76 291.2 456 39.0
PSO675G3863 Papaver somniferum HOM05D007061 ORTHO05D009017 2.4e-76 290.4 456 39.0
AagrBONN_evm.TU.Sc2ySwM_228.3482 Anthoceros agrestis HOM05D007061 ORTHO05D009017 3.1e-76 290.0 455 40.4
Prupe.4G128300 Prunus persica HOM05D007061 ORTHO05D009017 3.1e-76 290.0 456 39.0
QL04p093744 Quercus lobata HOM05D007061 ORTHO05D009017 3.1e-76 290.0 467 38.3
CARHR045980 Cardamine hirsuta HOM05D007061 ORTHO05D009017 4.0e-76 289.7 456 39.3
AL1G64530 Arabidopsis lyrata HOM05D007061 ORTHO05D009017 5.3e-76 289.3 456 39.7
Mapoly0013s0085 Marchantia polymorpha HOM05D007061 ORTHO05D009017 5.3e-76 289.3 457 40.0
SMO145G0248 Selaginella moellendorffii HOM05D007061 ORTHO05D009017 5.3e-76 289.3 463 40.4
CiPaw.11G057200 Carya illinoinensis HOM05D007061 ORTHO05D009017 6.9e-76 288.9 456 39.7
ATR0763G190 Amborella trichopoda HOM05D007061 ORTHO05D009017 9.0e-76 288.5 456 39.5
CSS0041382 Camellia sinensis var. sinensis HOM05D007061 ORTHO05D009017 1.5e-75 287.7 456 38.8
Psat4g170560 Pisum sativum HOM05D007061 ORTHO05D009017 1.5e-75 287.7 457 38.5
Sabra10G0133700 Salix brachista HOM05D007061 ORTHO05D009017 2.0e-75 287.3 464 38.1
CsaV3_6G013460 Cucumis sativus L. HOM05D007061 ORTHO05D009017 5.8e-75 285.8 456 38.2
arahy.Tifrunner.gnm1.ann1.69KP4R Arachis hypogaea HOM05D007061 ORTHO05D009017 7.6e-75 285.4 445 39.1
MD10G1216400 Malus domestica HOM05D007061 ORTHO05D009017 7.6e-75 285.4 456 38.8
RcHm_v2.0_Chr5g0023411 Rosa chinensis HOM05D007061 ORTHO05D009017 9.9e-75 285.0 456 38.4
Ciclev10004974m.g Citrus clementina HOM05D007061 ORTHO05D009017 1.3e-74 284.6 456 38.8
Nn7g38366 Nelumbo nucifera HOM05D007061 ORTHO05D009017 1.7e-74 284.3 456 37.5
Hma1.2p1_0151F.1_g067030 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 3.8e-74 283.1 456 37.9
Lj2A10G39 Lonicera japonica HOM05D007061 ORTHO05D009017 3.8e-74 283.1 461 39.5
Cre16.g649400 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 1.9e-73 280.8 474 38.8
Phvul.011G179100 Phaseolus vulgaris HOM05D007061 ORTHO05D009017 1.6e-72 277.7 442 38.0
vmacro11681 Vaccinium macrocarpon HOM05D007061 ORTHO05D009017 4.6e-72 276.2 505 37.8
GSVIVG01036723001 Vitis vinifera HOM05D007061 ORTHO05D009017 1.0e-71 275.0 442 38.9
Carub.0001s4486 Capsella rubella HOM05D007061 ORTHO05D009017 1.3e-71 274.6 442 39.4
Zm00001eb233280 Zea mays HOM05D007061 ORTHO05D009017 5.1e-71 272.7 456 36.6
Manes.16G047900 Manihot esculenta HOM05D007061 ORTHO05D009017 2.5e-70 270.4 445 38.4
ClCG02G018710 Citrullus lanatus HOM05D007061 ORTHO05D009017 5.6e-70 269.2 469 36.7
FAN11G3441 Fragaria x ananassa HOM05D007061 ORTHO05D009017 3.2e-65 253.4 418 38.0
Cc05_g16540 Coffea canephora HOM05D007061 ORTHO05D009017 9.3e-65 251.9 416 37.7
Os02g0173700 Oryza sativa ssp. japonica HOM05D007061 ORTHO05D009017 1.2e-64 251.5 418 37.3
Nitab4.5_0000029g0190 Nicotiana tabacum HOM05D007061 ORTHO05D009017 4.3e-62 243.0 456 36.2
SalBow8G1251 Salvia bowleyana HOM05D007061 ORTHO05D009017 1.6e-61 241.1 568 31.3
Peaxi162Scf00452g00232 Petunia axillaris HOM05D007061 ORTHO05D009017 2.1e-61 240.7 456 36.2
SGA_v2.0_scaffold186G40180 Striga asiatica HOM05D007061 ORTHO05D009017 2.8e-61 240.4 456 36.4
DCAR_009658 Daucus carota HOM05D007061 ORTHO05D009017 3.7e-61 240.0 391 37.3
CAN.G943.59 Capsicum annuum HOM05D007061 ORTHO05D009017 3.1e-60 236.9 456 36.4
Gohir.A07G044000 Gossypium hirsutum HOM05D007061 ORTHO05D009017 5.3e-60 236.1 456 33.6
BcaC05g28094 Brassica carinata HOM05D007061 ORTHO05D009017 6.9e-60 235.7 457 35.2
arahy.Tifrunner.gnm1.ann1.RLLR5G Arachis hypogaea HOM05D007061 ORTHO05D009017 9.9e-59 231.9 645 28.8
Cpa.g.sc32.92 Carica papaya HOM05D007061 ORTHO05D009017 6.4e-58 229.2 365 39.7
FAN25G0842 Fragaria x ananassa HOM05D007061 ORTHO05D009017 7.9e-56 222.2 456 33.3
Migut.M01505 Erythranthe guttata HOM05D007061 ORTHO05D009017 6.7e-55 219.2 456 33.6
AUR62037650 Chenopodium quinoa HOM05D007061 ORTHO05D009017 1.1e-54 218.4 365 38.1
MELO3C019630.2 Cucumis melo HOM05D007061 ORTHO05D009017 1.5e-54 218.0 365 37.8
SalBow8G1458 Salvia bowleyana HOM05D007061 ORTHO05D009017 5.6e-54 216.1 370 37.0
FAN16G1770 Fragaria x ananassa HOM05D007061 ORTHO05D009017 2.8e-53 213.8 461 33.4
Dinv42463 Davidia involucrata HOM05D007061 ORTHO05D009017 6.2e-53 212.6 365 36.4
CDE01G0579 Ceratophyllum demersum HOM05D007061 ORTHO05D009017 4.5e-51 206.5 446 33.2
Atru.chr1.57 Acer truncatum HOM05D007061 ORTHO05D009017 1.7e-50 204.5 378 34.9
Nitab4.5_0002862g0050 Nicotiana tabacum HOM05D007061 ORTHO05D009017 6.5e-50 202.6 460 32.6
Sc03g0005020 Simmondsia chinensis HOM05D007061 ORTHO05D009017 3.4e-43 180.3 325 36.0
COL.COLO4_24973 Corchorus olitorius HOM05D007061 ORTHO05D009017 7.7e-43 179.1 456 29.4
Sed0001021 Sechium edule HOM05D007061 ORTHO05D009017 1.0e-42 178.7 304 38.2
TWI59G0237 Tripterygium wilfordii HOM05D007061 ORTHO05D009017 1.3e-42 178.3 304 39.8
VMungo1127G1118 Vigna mungo HOM05D007061 ORTHO05D009017 1.3e-42 178.3 309 36.2
Thecc.07G189200 Theobroma cacao HOM05D007061 ORTHO05D009017 9.4e-41 172.2 304 35.9
BolC5t32863H Brassica oleracea HOM05D007061 ORTHO05D009017 3.3e-38 163.7 287 38.0
Rhsim06G0244100 Rhododendron simsii HOM05D007061 ORTHO05D009017 5.7e-38 162.9 337 35.9
MD05G1238000 Malus domestica HOM05D007061 ORTHO05D009017 1.1e-30 138.7 165 45.5
SEGI_31810 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 1.7e-29 134.8 235 39.1
Cre09.g407900 Chlamydomonas reinhardtii HOM05D007061 ORTHO05D009017 2.4e-28 131.0 368 32.3
AT1G54310 Arabidopsis thaliana HOM05D007061 ORTHO05D009017 1.9e-25 121.3 222 37.8
Haze_07765 Corylus avellana HOM05D007061 ORTHO05D009017 8.0e-24 115.9 361 27.7
arahy.Tifrunner.gnm1.ann1.R5CYRF Arachis hypogaea HOM05D007061 ORTHO05D009017 1.1e-20 105.5 206 34.0
HPP92_028078 Vanilla planifolia HOM05D007061 ORTHO05D009017 7.0e-20 102.8 104 48.1
arahy.Tifrunner.gnm1.ann1.4L0SCR Arachis hypogaea HOM05D007061 ORTHO05D009017 1.0e-18 99.0 96 50.0
Actinidia26210 Actinidia chinensis HOM05D007061 ORTHO05D009017 6.5e-18 96.3 135 41.5
SEGI_33801 Sequoiadendron giganteum HOM05D007061 ORTHO05D009017 3.6e-16 90.5 133 38.3
Rhsim06G0244000 Rhododendron simsii HOM05D007061 ORTHO05D009017 1.0e-15 89.0 133 37.6
HPP92_028076 Vanilla planifolia HOM05D007061 ORTHO05D009017 1.7e-10 71.6 70 45.7
RcHm_v2.0_Chr1g0324361 Rosa chinensis HOM05D007061 ORTHO05D009017 3.8e-10 70.5 67 47.8
Hma1.2p1_0151F.1_g067050 Hydrangea macrophylla HOM05D007061 ORTHO05D009017 6.5e-10 69.7 119 33.6
SGA_v2.0_scaffold112G31643 Striga asiatica HOM05D007061 ORTHO05D009017 6.5e-10 69.7 84 40.5
SGA_v2.0_scaffold60G20904 Striga asiatica HOM05D007061 ORTHO05D009017 6.5e-10 69.7 84 40.5
Zm00001eb199470 Zea mays HOM05D000573 ORTHO05D000425 1.5e-06 58.5 148 31.1
PRCOL_00004733 Prasinoderma coloniale HOM05D007061 ORTHO05D333335 5.7e-06 56.6 227 27.8
Zm00001eb199490 Zea mays HOM05D000573 ORTHO05D000425 7.5e-06 56.2 148 31.1
MCO14G211 Micromonas commoda HOM05D027329 ORTHO05D268215 9.8e-06 55.8 248 26.6


User provided reference genes

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