Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G522 Micromonas commoda HOM05D000259 ORTHO05D000155 1.2e-133 479.9 252 100.0
Zm00001eb105000 Zea mays HOM05D000259 ORTHO05D000155 3.1e-09 66.6 223 26.5
Dinv32463 Davidia involucrata HOM05D000259 ORTHO05D000155 7.6e-08 62.0 240 26.2
Pp3c14_25200 Physcomitrium patens HOM05D000259 ORTHO05D000155 9.9e-08 61.6 220 25.9
Os07g0483500 Oryza sativa ssp. japonica HOM05D000259 ORTHO05D000155 1.3e-07 61.2 223 25.1
AUR62036280 Chenopodium quinoa HOM05D000259 ORTHO05D000155 2.2e-07 60.5 218 28.9
MD14G1004500 Malus domestica HOM05D000259 ORTHO05D000155 2.2e-07 60.5 222 27.9
PSO732G0562 Papaver somniferum HOM05D000259 ORTHO05D000155 2.2e-07 60.5 240 27.5
Zm00001eb321450 Zea mays HOM05D000259 ORTHO05D000155 2.2e-07 60.5 223 23.8
Cfa003947 Carpinus fangiana HOM05D000259 ORTHO05D000155 2.9e-07 60.1 234 25.2
Sopen11g011430 Solanum pennellii HOM05D000259 ORTHO05D000155 2.9e-07 60.1 239 25.5
vmacro07546 Vaccinium macrocarpon HOM05D000259 ORTHO05D000155 2.9e-07 60.1 237 27.4
AUR62039728 Chenopodium quinoa HOM05D000259 ORTHO05D000155 3.7e-07 59.7 224 28.1
FvH4_2g20170 Fragaria vesca HOM05D000259 ORTHO05D000155 3.7e-07 59.7 184 31.0
FAN24G2657 Fragaria x ananassa HOM05D000259 ORTHO05D000155 3.7e-07 59.7 184 31.0
Nn1g03056 Nelumbo nucifera HOM05D000259 ORTHO05D000155 3.7e-07 59.7 240 27.1
PSO675G1209 Papaver somniferum HOM05D000259 ORTHO05D000155 3.7e-07 59.7 240 27.5
Sc22g0002950 Simmondsia chinensis HOM05D000259 ORTHO05D000155 3.7e-07 59.7 218 27.1
COL.COLO4_12689 Corchorus olitorius HOM05D000259 ORTHO05D000155 4.9e-07 59.3 220 26.4
Thecc.09G223400 Theobroma cacao HOM05D000259 ORTHO05D000155 4.9e-07 59.3 239 25.9
Aqoxy2G00605 Aquilegia oxysepala HOM05D000259 ORTHO05D000155 6.4e-07 58.9 228 26.3
AL1G36140 Arabidopsis lyrata HOM05D000259 ORTHO05D000155 6.4e-07 58.9 215 26.5
AT1G22610 Arabidopsis thaliana HOM05D000259 ORTHO05D000155 6.4e-07 58.9 215 26.5
AT3G57880 Arabidopsis thaliana HOM05D000259 ORTHO05D000155 6.4e-07 58.9 196 27.0
Carub.0001s2212 Capsella rubella HOM05D000259 ORTHO05D000155 6.4e-07 58.9 215 26.5
Thhalv10006627m.g Eutrema salsugineum HOM05D000259 ORTHO05D000155 6.4e-07 58.9 215 27.9
Hma1.2p1_0127F.1_g059460 Hydrangea macrophylla HOM05D000259 ORTHO05D000155 6.4e-07 58.9 218 27.1
Hma1.2p1_2364F.1_g320650 Hydrangea macrophylla HOM05D000259 ORTHO05D000155 6.4e-07 58.9 218 27.1
BcaB07g32271 Brassica carinata HOM05D000259 ORTHO05D000155 8.3e-07 58.5 215 27.0
BraA10t44215Z Brassica rapa HOM05D000259 ORTHO05D000155 8.3e-07 58.5 227 28.2
FAN15G3559 Fragaria x ananassa HOM05D000259 ORTHO05D000155 8.3e-07 58.5 184 31.0
FAN27G0492 Fragaria x ananassa HOM05D000259 ORTHO05D000155 8.3e-07 58.5 184 31.0
PGR031G2758 Punica granatum HOM05D000259 ORTHO05D000155 8.3e-07 58.5 220 27.7
Zm00001eb300760 Zea mays HOM05D000259 ORTHO05D000155 8.3e-07 58.5 237 25.3
Aa31LG7G6490 Aethionema arabicum HOM05D000259 ORTHO05D000155 1.1e-06 58.2 215 26.5
BcaC05g26189 Brassica carinata HOM05D000259 ORTHO05D000155 1.1e-06 58.2 215 27.0
A09p42150 Brassica napus HOM05D000259 ORTHO05D000155 1.1e-06 58.2 215 27.0
A10p21540 Brassica napus HOM05D000259 ORTHO05D000155 1.1e-06 58.2 227 28.2
C05p21750 Brassica napus HOM05D000259 ORTHO05D000155 1.1e-06 58.2 215 27.0
BolC5t30869H Brassica oleracea HOM05D000259 ORTHO05D000155 1.1e-06 58.2 215 27.0
BraA09t39701Z Brassica rapa HOM05D000259 ORTHO05D000155 1.1e-06 58.2 215 27.0
Haze_21292 Corylus avellana HOM05D000259 ORTHO05D000155 1.1e-06 58.2 238 25.2
Thhalv10012529m.g Eutrema salsugineum HOM05D000259 ORTHO05D000155 1.1e-06 58.2 227 27.8
Gohir.D08G152000 Gossypium hirsutum HOM05D000259 ORTHO05D000155 1.1e-06 58.2 220 25.9
CiPaw.08G002300 Carya illinoinensis HOM05D000259 ORTHO05D000155 1.4e-06 57.8 239 28.0
HanXRQChr05g0151031 Helianthus annuus HOM05D000259 ORTHO05D000155 1.4e-06 57.8 239 26.8
EL10Ac5g11769 Beta vulgaris HOM05D000259 ORTHO05D000155 1.9e-06 57.4 226 27.0
BcaB08g36722 Brassica carinata HOM05D000259 ORTHO05D000155 1.9e-06 57.4 227 27.8
CARHR022980 Cardamine hirsuta HOM05D000259 ORTHO05D000155 1.9e-06 57.4 215 27.0
CiPaw.10G126300 Carya illinoinensis HOM05D000259 ORTHO05D000155 1.9e-06 57.4 220 27.3
Gohir.D06G112600 Gossypium hirsutum HOM05D000259 ORTHO05D000155 1.9e-06 57.4 239 25.5
Gorai.010G128400 Gossypium raimondii HOM05D000259 ORTHO05D000155 1.9e-06 57.4 239 25.5
Psat0s2674g0120 Pisum sativum HOM05D000259 ORTHO05D000155 1.9e-06 57.4 210 24.3
THA.LOC104806385 Tarenaya hassleriana HOM05D000259 ORTHO05D000155 1.9e-06 57.4 220 25.9
Aqoxy7G00348 Aquilegia oxysepala HOM05D000259 ORTHO05D000155 2.4e-06 57.0 220 25.9
AL5G39540 Arabidopsis lyrata HOM05D000259 ORTHO05D000155 2.4e-06 57.0 196 26.5
Cc01_g04150 Coffea canephora HOM05D000259 ORTHO05D000155 2.4e-06 57.0 213 26.8
Thhalv10012747m.g Eutrema salsugineum HOM05D000259 ORTHO05D000155 2.4e-06 57.0 240 26.2
Gorai.004G157900 Gossypium raimondii HOM05D000259 ORTHO05D000155 2.4e-06 57.0 220 25.9
Nitab4.5_0001534g0040 Nicotiana tabacum HOM05D000259 ORTHO05D000155 2.4e-06 57.0 239 26.4
Psat4g202800 Pisum sativum HOM05D000259 ORTHO05D000155 2.4e-06 57.0 220 25.0
TPR.G8012 Trifolium pratense HOM05D000259 ORTHO05D000155 2.4e-06 57.0 235 25.5
ATR0723G002 Amborella trichopoda HOM05D000259 ORTHO05D000155 3.2e-06 56.6 216 25.9
BcaC04g18738 Brassica carinata HOM05D000259 ORTHO05D000155 3.2e-06 56.6 227 27.8
C03p06690 Brassica napus HOM05D000259 ORTHO05D000155 3.2e-06 56.6 240 25.4
C09p59010 Brassica napus HOM05D000259 ORTHO05D000155 3.2e-06 56.6 222 27.5
BolC9t58747H Brassica oleracea HOM05D000259 ORTHO05D000155 3.2e-06 56.6 227 27.8
Haze_15480 Corylus avellana HOM05D000259 ORTHO05D000155 3.2e-06 56.6 220 25.5
Duzib170G0646 Durio zibethinus HOM05D000259 ORTHO05D000155 3.2e-06 56.6 238 25.6
Migut.D00560 Erythranthe guttata HOM05D000259 ORTHO05D000155 3.2e-06 56.6 239 25.1
Glyma.03G012600 Glycine max HOM05D000259 ORTHO05D000155 3.2e-06 56.6 236 25.0
Gohir.A08G130500 Gossypium hirsutum HOM05D000259 ORTHO05D000155 3.2e-06 56.6 220 25.5
Potri.011G052000 Populus trichocarpa HOM05D000259 ORTHO05D000155 3.2e-06 56.6 78 38.5
RcHm_v2.0_Chr6g0285931 Rosa chinensis HOM05D000259 ORTHO05D000155 3.2e-06 56.6 184 31.0
SMO115G0049 Selaginella moellendorffii HOM05D000259 ORTHO05D000155 3.2e-06 56.6 210 24.8
PGSC0003DMG400039256 Solanum tuberosum HOM05D000259 ORTHO05D000155 3.2e-06 56.6 239 25.5
PGSC0003DMG402009270 Solanum tuberosum HOM05D000259 ORTHO05D000155 3.2e-06 56.6 239 25.5
TWI59G1214 Tripterygium wilfordii HOM05D000259 ORTHO05D000155 3.2e-06 56.6 240 25.0
TWI60G0204 Tripterygium wilfordii HOM05D000259 ORTHO05D000155 3.2e-06 56.6 218 27.1
TAR628G0243 Trochodendron aralioides HOM05D000259 ORTHO05D000155 3.2e-06 56.6 239 25.1
AL6G23560 Arabidopsis lyrata HOM05D000259 ORTHO05D000155 4.1e-06 56.2 240 25.8
BcaB01g05385 Brassica carinata HOM05D000259 ORTHO05D000155 4.1e-06 56.2 240 25.4
A03p05740 Brassica napus HOM05D000259 ORTHO05D000155 4.1e-06 56.2 240 25.4
C02p38060 Brassica napus HOM05D000259 ORTHO05D000155 4.1e-06 56.2 221 24.4
BolC3t13174H Brassica oleracea HOM05D000259 ORTHO05D000155 4.1e-06 56.2 240 25.4
BraA03t09912Z Brassica rapa HOM05D000259 ORTHO05D000155 4.1e-06 56.2 240 25.4
CANSAT78G0055 Cannabis sativa HOM05D000259 ORTHO05D000155 4.1e-06 56.2 238 26.1
CAN.G155.1 Capsicum annuum HOM05D000259 ORTHO05D000155 4.1e-06 56.2 239 25.9
CARHR043630 Cardamine hirsuta HOM05D000259 ORTHO05D000155 4.1e-06 56.2 196 26.0
Duzib177G0526 Durio zibethinus HOM05D000259 ORTHO05D000155 4.1e-06 56.2 221 26.2
ECA246G2552 Erigeron canadensis HOM05D000259 ORTHO05D000155 4.1e-06 56.2 238 26.5
Os07g0165100 Oryza sativa ssp. japonica HOM05D000259 ORTHO05D000155 4.1e-06 56.2 223 26.0
QL07p004931 Quercus lobata HOM05D000259 ORTHO05D000155 4.1e-06 56.2 222 25.7
Rhsim03G0054900 Rhododendron simsii HOM05D000259 ORTHO05D000155 4.1e-06 56.2 234 27.4
Sopen11g011470 Solanum pennellii HOM05D000259 ORTHO05D000155 4.1e-06 56.2 239 25.1
BolC2t09822H Brassica oleracea HOM05D000259 ORTHO05D000155 5.4e-06 55.8 221 24.4
Dinv43792 Davidia involucrata HOM05D000259 ORTHO05D000155 5.4e-06 55.8 240 25.0
Migut.C01308 Erythranthe guttata HOM05D000259 ORTHO05D000155 5.4e-06 55.8 239 24.3
Lalb_Chr05g0211841 Lupinus albus HOM05D000259 ORTHO05D000155 5.4e-06 55.8 240 24.2
Nitab4.5_0003826g0020 Nicotiana tabacum HOM05D000259 ORTHO05D000155 5.4e-06 55.8 239 26.4
SGA_v2.0_scaffold4G02246 Striga asiatica HOM05D000259 ORTHO05D000155 5.4e-06 55.8 220 27.3
TPR.G37918 Trifolium pratense HOM05D000259 ORTHO05D000155 5.4e-06 55.8 212 27.4
Aa31LG5G310 Aethionema arabicum HOM05D000259 ORTHO05D000155 7.1e-06 55.5 203 26.1
A02p24190 Brassica napus HOM05D000259 ORTHO05D000155 7.1e-06 55.5 235 23.8
BraA02t07410Z Brassica rapa HOM05D000259 ORTHO05D000155 7.1e-06 55.5 235 23.8
Migut.J00759 Erythranthe guttata HOM05D000259 ORTHO05D000155 7.1e-06 55.5 222 28.8
Glyma.07G072500 Glycine max HOM05D000259 ORTHO05D000155 7.1e-06 55.5 236 24.2
Manes.01G259100 Manihot esculenta HOM05D000259 ORTHO05D000155 7.1e-06 55.5 240 25.4
Potri.013G055500 Populus trichocarpa HOM05D000259 ORTHO05D000155 7.1e-06 55.5 222 25.2
Carub.0006s1114 Capsella rubella HOM05D000259 ORTHO05D000155 9.2e-06 55.1 240 25.8
PSO339G0329 Papaver somniferum HOM05D000259 ORTHO05D000155 9.2e-06 55.1 207 26.6
Peaxi162Scf00391g00710 Petunia axillaris HOM05D000259 ORTHO05D000155 9.2e-06 55.1 239 26.4
Sp6g26310 Schrenkiella parvula HOM05D000259 ORTHO05D000155 9.2e-06 55.1 223 27.8
Sc23g0001450 Simmondsia chinensis HOM05D000259 ORTHO05D000155 9.2e-06 55.1 238 26.5
PGSC0003DMG400004672 Solanum tuberosum HOM05D000259 ORTHO05D000155 9.2e-06 55.1 161 29.2
unitig_37.g13111 Utricularia gibba HOM05D000259 ORTHO05D000155 9.2e-06 55.1 227 24.7
vmacro13295 Vaccinium macrocarpon HOM05D000259 ORTHO05D000155 9.2e-06 55.1 240 25.0


User provided reference genes

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