Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G517 Micromonas commoda HOM05D006410 ORTHO05D007914 1.7e-247 859.0 453 100.0
CBR_g644 Chara braunii HOM05D006410 ORTHO05D007914 3.9e-31 140.2 201 35.8
Peaxi162Scf00146g01120 Petunia axillaris HOM05D006410 ORTHO05D007914 1.8e-28 131.3 203 36.5
SEGI_21416 Sequoiadendron giganteum HOM05D006410 ORTHO05D007914 9.0e-28 129.0 184 33.7
Sopen10g035110 Solanum pennellii HOM05D006410 ORTHO05D007914 1.0e-26 125.6 188 36.7
CARHR133250 Cardamine hirsuta HOM05D006410 ORTHO05D007914 1.3e-26 125.2 174 39.1
CDE04G0338 Ceratophyllum demersum HOM05D006410 ORTHO05D007914 1.3e-26 125.2 214 35.5
Solyc10g085690.2 Solanum lycopersicum HOM05D006410 ORTHO05D007914 1.7e-26 124.8 186 37.1
Lsat_1_v5_gn_9_39501 Lactuca sativa HOM05D006410 ORTHO05D007914 3.8e-26 123.6 218 33.9
AagrBONN_evm.TU.Sc2ySwM_344.4011 Anthoceros agrestis HOM05D006410 ORTHO05D007914 5.0e-26 123.2 248 33.5
CAN.G1018.3 Capsicum annuum HOM05D006410 ORTHO05D007914 5.0e-26 123.2 188 36.2
Lalb_Chr03g0043841 Lupinus albus HOM05D006410 ORTHO05D007914 5.0e-26 123.2 174 37.4
Carub.0004s2056 Capsella rubella HOM05D006410 ORTHO05D007914 8.5e-26 122.5 174 36.2
Haze_22079 Corylus avellana HOM05D006410 ORTHO05D007914 8.5e-26 122.5 194 35.1
Nitab4.5_0009611g0010 Nicotiana tabacum HOM05D006410 ORTHO05D007914 8.5e-26 122.5 170 36.5
BcaB01g03675 Brassica carinata HOM05D006410 ORTHO05D007914 1.1e-25 122.1 211 33.6
Glyma.09G273700 Glycine max HOM05D006410 ORTHO05D007914 1.1e-25 122.1 223 31.8
RcHm_v2.0_Chr3g0460291 Rosa chinensis HOM05D006410 ORTHO05D007914 1.4e-25 121.7 208 34.1
ATR1127G206 Amborella trichopoda HOM05D006410 ORTHO05D007914 1.9e-25 121.3 173 37.0
Dinv16966 Davidia involucrata HOM05D006410 ORTHO05D007914 1.9e-25 121.3 170 35.3
Hma1.2p1_0537F.1_g174300 Hydrangea macrophylla HOM05D006410 ORTHO05D007914 1.9e-25 121.3 170 34.1
AT2G38570 Arabidopsis thaliana HOM05D006410 ORTHO05D007914 2.5e-25 120.9 172 37.8
Thhalv10017800m.g Eutrema salsugineum HOM05D006410 ORTHO05D007914 2.5e-25 120.9 174 37.4
Sc07g0005960 Simmondsia chinensis HOM05D006410 ORTHO05D007914 2.5e-25 120.9 170 38.2
Nn2g10260 Nelumbo nucifera HOM05D006410 ORTHO05D007914 3.2e-25 120.6 193 33.7
Sp4g20910 Schrenkiella parvula HOM05D006410 ORTHO05D007914 4.2e-25 120.2 174 37.4
AL4G35850 Arabidopsis lyrata HOM05D006410 ORTHO05D007914 5.5e-25 119.8 174 36.8
BcaC01g05529 Brassica carinata HOM05D006410 ORTHO05D007914 5.5e-25 119.8 174 36.8
BolC3t14920H Brassica oleracea HOM05D006410 ORTHO05D007914 5.5e-25 119.8 174 36.8
Cfa013491 Carpinus fangiana HOM05D006410 ORTHO05D007914 5.5e-25 119.8 194 35.1
Gorai.005G003500 Gossypium raimondii HOM05D006410 ORTHO05D007914 5.5e-25 119.8 170 37.6
A03p21390 Brassica napus HOM05D006410 ORTHO05D007914 7.2e-25 119.4 174 36.8
ECA247G0827 Erigeron canadensis HOM05D006410 ORTHO05D007914 7.2e-25 119.4 193 34.2
Glyma.18G212900 Glycine max HOM05D006410 ORTHO05D007914 7.2e-25 119.4 223 31.8
arahy.Tifrunner.gnm1.ann1.LV5WBC Arachis hypogaea HOM05D006410 ORTHO05D007914 9.4e-25 119.0 223 33.6
C03p25260 Brassica napus HOM05D006410 ORTHO05D007914 9.4e-25 119.0 174 36.8
Ciclev10012138m.g Citrus clementina HOM05D006410 ORTHO05D007914 9.4e-25 119.0 173 36.4
Gohir.D02G003000 Gossypium hirsutum HOM05D006410 ORTHO05D007914 9.4e-25 119.0 170 37.6
PGR004G0643 Punica granatum HOM05D006410 ORTHO05D007914 9.4e-25 119.0 173 35.3
arahy.Tifrunner.gnm1.ann1.A09QMR Arachis hypogaea HOM05D006410 ORTHO05D007914 1.2e-24 118.6 174 37.9
Manes.09G123200 Manihot esculenta HOM05D006410 ORTHO05D007914 1.2e-24 118.6 170 35.9
BraA03t11374Z Brassica rapa HOM05D006410 ORTHO05D007914 1.6e-24 118.2 174 36.2
TAR633G1493 Trochodendron aralioides HOM05D006410 ORTHO05D007914 1.6e-24 118.2 209 32.1
arahy.Tifrunner.gnm1.ann1.K0FU58 Arachis hypogaea HOM05D006410 ORTHO05D007914 2.1e-24 117.9 223 32.7
Gohir.A02G002700 Gossypium hirsutum HOM05D006410 ORTHO05D007914 2.1e-24 117.9 170 37.1
Lj1g0017463 Lotus japonicus HOM05D006410 ORTHO05D007914 2.1e-24 117.9 223 31.8
THA.LOC104806212 Tarenaya hassleriana HOM05D006410 ORTHO05D007914 2.1e-24 117.9 171 36.8
GSVIVG01030169001 Vitis vinifera HOM05D006410 ORTHO05D007914 2.7e-24 117.5 170 34.7
CiPaw.10G165500 Carya illinoinensis HOM05D006410 ORTHO05D007914 3.6e-24 117.1 172 36.0
PSO339G1476 Papaver somniferum HOM05D006410 ORTHO05D007914 3.6e-24 117.1 201 31.3
QL07p031892 Quercus lobata HOM05D006410 ORTHO05D007914 3.6e-24 117.1 192 33.3
arahy.Tifrunner.gnm1.ann1.PEH6CG Arachis hypogaea HOM05D006410 ORTHO05D007914 4.6e-24 116.7 173 37.6
Phvul.008G081500 Phaseolus vulgaris HOM05D006410 ORTHO05D007914 4.6e-24 116.7 174 36.2
Prupe.6G295400 Prunus persica HOM05D006410 ORTHO05D007914 4.6e-24 116.7 194 33.0
TWI77G0542 Tripterygium wilfordii HOM05D006410 ORTHO05D007914 4.6e-24 116.7 174 35.1
PSO384G4459 Papaver somniferum HOM05D006410 ORTHO05D007914 6.1e-24 116.3 201 31.3
Medtr7g073510 Medicago truncatula HOM05D006410 ORTHO05D007914 1.0e-23 115.5 188 34.0
Zm00001eb395200 Zea mays HOM05D006410 ORTHO05D007914 1.0e-23 115.5 185 34.6
SalBow5G5142 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.4e-23 115.2 182 35.2
VMungo1383G1039 Vigna mungo HOM05D006410 ORTHO05D007914 1.4e-23 115.2 174 35.1
Atru.chr8.91 Acer truncatum HOM05D006410 ORTHO05D007914 1.8e-23 114.8 198 33.3
Actinidia20795 Actinidia chinensis HOM05D006410 ORTHO05D007914 1.8e-23 114.8 170 34.1
COL.COLO4_03931 Corchorus olitorius HOM05D006410 ORTHO05D007914 1.8e-23 114.8 170 36.5
FvH4_6g09660 Fragaria vesca HOM05D006410 ORTHO05D007914 1.8e-23 114.8 215 32.1
FAN14G0316 Fragaria x ananassa HOM05D006410 ORTHO05D007914 1.8e-23 114.8 215 32.1
Duzib212G0115 Durio zibethinus HOM05D006410 ORTHO05D007914 2.3e-23 114.4 174 36.2
TPR.G24331 Trifolium pratense HOM05D006410 ORTHO05D007914 3.0e-23 114.0 174 35.1
Eucgr.G00130 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.9e-23 113.6 170 34.7
Eucgr.H04867 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.9e-23 113.6 170 34.7
Eucgr.J00376 Eucalyptus grandis HOM05D006410 ORTHO05D007914 3.9e-23 113.6 170 34.7
FAN09G0831 Fragaria x ananassa HOM05D006410 ORTHO05D007914 3.9e-23 113.6 215 31.2
HanXRQChr15g0464751 Helianthus annuus HOM05D006410 ORTHO05D007914 3.9e-23 113.6 168 34.5
Rhsim05G0231700 Rhododendron simsii HOM05D006410 ORTHO05D007914 3.9e-23 113.6 195 33.3
FAN05G4204 Fragaria x ananassa HOM05D006410 ORTHO05D007914 5.1e-23 113.2 215 32.6
ClCG04G006320 Citrullus lanatus HOM05D006410 ORTHO05D007914 6.7e-23 112.8 213 31.0
FAN02G1808 Fragaria x ananassa HOM05D006410 ORTHO05D007914 6.7e-23 112.8 215 32.1
Aqoxy4G03284 Aquilegia oxysepala HOM05D006410 ORTHO05D007914 8.8e-23 112.5 170 32.9
Psat3g118640 Pisum sativum HOM05D006410 ORTHO05D007914 8.8e-23 112.5 174 33.9
Eucgr.A00566 Eucalyptus grandis HOM05D006410 ORTHO05D007914 1.1e-22 112.1 170 34.1
Thecc.04G150000 Theobroma cacao HOM05D006410 ORTHO05D007914 1.5e-22 111.7 170 36.5
Eucgr.G01626 Eucalyptus grandis HOM05D006410 ORTHO05D007914 2.0e-22 111.3 170 34.1
MD12G1190300 Malus domestica HOM05D006410 ORTHO05D007914 2.0e-22 111.3 194 33.5
vmacro20378 Vaccinium macrocarpon HOM05D006410 ORTHO05D007914 2.0e-22 111.3 170 33.5
MD04G1175900 Malus domestica HOM05D006410 ORTHO05D007914 2.5e-22 110.9 201 32.3
Hund19754 Selenicereus undatus HOM05D006410 ORTHO05D007914 2.5e-22 110.9 174 35.1
arahy.Tifrunner.gnm1.ann1.2Y9ZDG Arachis hypogaea HOM05D006410 ORTHO05D007914 3.3e-22 110.5 165 37.0
MSTRG.5489 Avicennia marina HOM05D006410 ORTHO05D007914 4.3e-22 110.2 171 33.3
CsaV3_4G027230 Cucumis sativus L. HOM05D006410 ORTHO05D007914 4.3e-22 110.2 211 29.9
Potri.006G109500 Populus trichocarpa HOM05D006410 ORTHO05D007914 4.3e-22 110.2 170 32.9
Cc06_g00300 Coffea canephora HOM05D006410 ORTHO05D007914 5.7e-22 109.8 170 34.1
Eucgr.K01292 Eucalyptus grandis HOM05D006410 ORTHO05D007914 5.7e-22 109.8 170 33.5
Nitab4.5_0000381g0170 Nicotiana tabacum HOM05D006410 ORTHO05D007914 5.7e-22 109.8 216 31.0
Sabra06G0085200 Salix brachista HOM05D006410 ORTHO05D007914 5.7e-22 109.8 205 30.2
AUR62029781 Chenopodium quinoa HOM05D006410 ORTHO05D007914 9.7e-22 109.0 203 33.5
EL10Ac7g17116 Beta vulgaris HOM05D006410 ORTHO05D007914 4.8e-21 106.7 174 34.5
CANSAT21G1321 Cannabis sativa HOM05D006410 ORTHO05D007914 9.1e-20 102.4 174 32.8
Lj3A940G60 Lonicera japonica HOM05D006410 ORTHO05D007914 1.0e-18 99.0 139 36.0
Ca_07767_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 3.8e-18 97.1 139 36.0
SGA_v2.0_scaffold85G26601 Striga asiatica HOM05D006410 ORTHO05D007914 5.0e-18 96.7 143 37.8
HPP92_026801 Vanilla planifolia HOM05D006410 ORTHO05D007914 5.0e-18 96.7 196 30.1
Cre17.g738200 Chlamydomonas reinhardtii HOM05D006410 ORTHO05D007914 8.5e-18 95.9 178 32.6
HPP92_000776 Vanilla planifolia HOM05D006410 ORTHO05D007914 1.9e-17 94.7 196 29.6
BcaB01g00971 Brassica carinata HOM05D006410 ORTHO05D007914 4.7e-16 90.1 181 31.5
SalBow5G0627 Salvia bowleyana HOM05D006410 ORTHO05D007914 1.4e-15 88.6 116 37.9
Ca_07774_v3 Cicer arietinum L. HOM05D006410 ORTHO05D007914 6.7e-15 86.3 157 33.8
CSS0050432 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.5e-14 85.1 158 35.4
Cpa.g.sc86.77 Carica papaya HOM05D006410 ORTHO05D007914 1.3e-13 82.0 179 30.2
PRCOL_00003679 Prasinoderma coloniale HOM05D006410 ORTHO05D007914 1.7e-10 71.6 180 32.2
Os03g0334100 Oryza sativa ssp. japonica HOM05D006410 ORTHO05D007914 2.9e-10 70.9 106 37.7
CSS0030024 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.5e-09 68.6 91 37.4
arahy.Tifrunner.gnm1.ann1.CPU7B3 Arachis hypogaea HOM05D006410 ORTHO05D007914 1.9e-09 68.2 103 35.0
MELO3C025226.2 Cucumis melo HOM05D006410 ORTHO05D007914 2.5e-09 67.8 108 34.3
CSS0025367 Camellia sinensis var. sinensis HOM05D006410 ORTHO05D007914 1.4e-07 62.0 95 32.6
RhsimUnG0084100 Rhododendron simsii HOM05D006410 ORTHO05D007914 1.5e-06 58.5 102 31.4
RhsimUnG0080900 Rhododendron simsii HOM05D006410 ORTHO05D007914 9.7e-06 55.8 92 30.4


User provided reference genes

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