Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G503 Micromonas commoda HOM05D005919 ORTHO05D007176 3.6e-263 911.0 446 100.0
AUR62013597 Chenopodium quinoa HOM05D005919 ORTHO05D007176 8.4e-95 351.7 464 40.7
HanXRQChr09g0244361 Helianthus annuus HOM05D005919 ORTHO05D007176 2.5e-94 350.1 454 39.9
THA.LOC104819083 Tarenaya hassleriana HOM05D005919 ORTHO05D007176 2.1e-93 347.1 458 40.2
Aa31LG11G14640 Aethionema arabicum HOM05D005919 ORTHO05D007176 2.7e-93 346.7 462 39.6
Cc06_g14010 Coffea canephora HOM05D005919 ORTHO05D007176 7.9e-93 345.1 458 41.7
Atru.chr7.495 Acer truncatum HOM05D005919 ORTHO05D007176 1.0e-92 344.7 443 42.2
AL6G25620 Arabidopsis lyrata HOM05D005919 ORTHO05D007176 1.0e-92 344.7 461 39.9
AT5G14850 Arabidopsis thaliana HOM05D005919 ORTHO05D007176 1.3e-92 344.4 462 40.5
CANSAT11G0901 Cannabis sativa HOM05D005919 ORTHO05D007176 1.3e-92 344.4 457 40.9
C02p07360 Brassica napus HOM05D005919 ORTHO05D007176 3.9e-92 342.8 464 39.7
BolC2t06667H Brassica oleracea HOM05D005919 ORTHO05D007176 3.9e-92 342.8 464 39.7
EL10Ac1g01561 Beta vulgaris HOM05D005919 ORTHO05D007176 5.1e-92 342.4 457 42.0
Ciclev10007971m.g Citrus clementina HOM05D005919 ORTHO05D007176 5.1e-92 342.4 457 40.9
BcaNung03092 Brassica carinata HOM05D005919 ORTHO05D007176 1.1e-91 341.3 465 40.4
A02p02750 Brassica napus HOM05D005919 ORTHO05D007176 1.5e-91 340.9 462 40.0
Nn2g12541 Nelumbo nucifera HOM05D005919 ORTHO05D007176 1.5e-91 340.9 462 40.0
Thhalv10013155m.g Eutrema salsugineum HOM05D005919 ORTHO05D007176 1.9e-91 340.5 460 40.4
Pp3c10_23620 Physcomitrium patens HOM05D005919 ORTHO05D007176 1.9e-91 340.5 479 39.5
Pp3c10_23630 Physcomitrium patens HOM05D005919 ORTHO05D007176 1.9e-91 340.5 479 39.5
MSTRG.26243 Avicennia marina HOM05D005919 ORTHO05D007176 2.5e-91 340.1 461 39.3
BraA02t05246Z Brassica rapa HOM05D005919 ORTHO05D007176 3.3e-91 339.7 466 39.7
Carub.0006s1300 Capsella rubella HOM05D005919 ORTHO05D007176 5.7e-91 339.0 462 39.4
Lsat_1_v5_gn_7_51941 Lactuca sativa HOM05D005919 ORTHO05D007176 7.4e-91 338.6 453 38.6
SMO172G0226 Selaginella moellendorffii HOM05D005919 ORTHO05D007176 9.7e-91 338.2 443 41.3
Cpa.g.sc42.125 Carica papaya HOM05D005919 ORTHO05D007176 1.3e-90 337.8 454 40.7
BcaC03g13443 Brassica carinata HOM05D005919 ORTHO05D007176 1.6e-90 337.4 464 39.4
Sp6g29230 Schrenkiella parvula HOM05D005919 ORTHO05D007176 1.6e-90 337.4 464 39.9
TWI53G0694 Tripterygium wilfordii HOM05D005919 ORTHO05D007176 1.6e-90 337.4 458 40.6
Eucgr.C00228 Eucalyptus grandis HOM05D005919 ORTHO05D007176 2.8e-90 336.7 457 39.2
MD16G1262500 Malus domestica HOM05D005919 ORTHO05D007176 3.7e-90 336.3 448 41.1
Aqoxy7G03239_Aqoxy7G03240 Aquilegia oxysepala HOM05D005919 ORTHO05D007176 4.8e-90 335.9 456 39.9
Mapoly0152s0016 Marchantia polymorpha HOM05D005919 ORTHO05D007176 4.8e-90 335.9 487 39.6
PGR042G2595 Punica granatum HOM05D005919 ORTHO05D007176 4.8e-90 335.9 443 41.3
Thecc.09G160900 Theobroma cacao HOM05D005919 ORTHO05D007176 4.8e-90 335.9 457 39.8
Cfa013547 Carpinus fangiana HOM05D005919 ORTHO05D007176 6.3e-90 335.5 455 40.2
Sed0019098 Sechium edule HOM05D005919 ORTHO05D007176 8.2e-90 335.1 442 40.7
Hma1.2p1_1531F.1_g289233 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.1e-89 334.7 457 40.3
Manes.15G095400 Manihot esculenta HOM05D005919 ORTHO05D007176 1.8e-89 334.0 457 39.2
FvH4_4g09660 Fragaria vesca HOM05D005919 ORTHO05D007176 2.4e-89 333.6 457 40.5
RcHm_v2.0_Chr4g0404951 Rosa chinensis HOM05D005919 ORTHO05D007176 3.1e-89 333.2 457 39.8
FAN12G0251 Fragaria x ananassa HOM05D005919 ORTHO05D007176 4.1e-89 332.8 457 40.5
Duzib150G0612 Durio zibethinus HOM05D005919 ORTHO05D007176 6.9e-89 332.0 457 39.8
SHI02981 Sapria himalayana HOM05D005919 ORTHO05D007176 6.9e-89 332.0 441 40.4
arahy.Tifrunner.gnm1.ann1.7FR1J2 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.0e-89 331.6 457 40.3
arahy.Tifrunner.gnm1.ann1.L1AVC7 Arachis hypogaea HOM05D005919 ORTHO05D007176 9.0e-89 331.6 457 40.3
Rhsim01G0012200 Rhododendron simsii HOM05D005919 ORTHO05D007176 9.0e-89 331.6 457 38.9
ECA240G3021 Erigeron canadensis HOM05D005919 ORTHO05D007176 2.0e-88 330.5 457 38.5
Sc02g0003990 Simmondsia chinensis HOM05D005919 ORTHO05D007176 2.0e-88 330.5 458 40.0
CSS0021645 Camellia sinensis var. sinensis HOM05D005919 ORTHO05D007176 3.4e-88 329.7 461 39.0
Gohir.A06G079400 Gossypium hirsutum HOM05D005919 ORTHO05D007176 3.4e-88 329.7 450 39.3
TAR383G0301 Trochodendron aralioides HOM05D005919 ORTHO05D007176 3.4e-88 329.7 457 40.0
Zm00001eb229730 Zea mays HOM05D005919 ORTHO05D007176 3.4e-88 329.7 469 40.7
Potri.018G098700 Populus trichocarpa HOM05D005919 ORTHO05D007176 4.5e-88 329.3 456 39.9
arahy.Tifrunner.gnm1.ann1.KJ1SMN Arachis hypogaea HOM05D005919 ORTHO05D007176 1.7e-87 327.4 457 39.8
Prupe.1G097400 Prunus persica HOM05D005919 ORTHO05D007176 2.9e-87 326.6 468 39.3
ATR0824G006 Amborella trichopoda HOM05D005919 ORTHO05D007176 5.0e-87 325.9 460 38.9
QL02p095651 Quercus lobata HOM05D005919 ORTHO05D007176 5.0e-87 325.9 457 39.4
CsaV3_1G028860 Cucumis sativus L. HOM05D005919 ORTHO05D007176 6.5e-87 325.5 441 39.5
Migut.K00275 Erythranthe guttata HOM05D005919 ORTHO05D007176 6.5e-87 325.5 456 39.3
FAN12G4285 Fragaria x ananassa HOM05D005919 ORTHO05D007176 6.5e-87 325.5 464 39.9
Actinidia02641 Actinidia chinensis HOM05D005919 ORTHO05D007176 8.5e-87 325.1 455 38.9
arahy.Tifrunner.gnm1.ann1.F7IW15 Arachis hypogaea HOM05D005919 ORTHO05D007176 8.5e-87 325.1 457 39.6
GSVIVG01023723001 Vitis vinifera HOM05D005919 ORTHO05D007176 8.5e-87 325.1 451 39.0
FAN17G2955 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.4e-86 324.3 464 39.7
PSO063G4858 Papaver somniferum HOM05D005919 ORTHO05D007176 1.4e-86 324.3 457 38.3
ClCG09G013740 Citrullus lanatus HOM05D005919 ORTHO05D007176 1.9e-86 323.9 446 39.0
PGSC0003DMG401011224 Solanum tuberosum HOM05D005919 ORTHO05D007176 2.5e-86 323.6 458 38.2
CAN.G1870.2 Capsicum annuum HOM05D005919 ORTHO05D007176 9.4e-86 321.6 455 38.2
Phvul.003G151000 Phaseolus vulgaris HOM05D005919 ORTHO05D007176 1.2e-85 321.2 457 38.3
FAN22G0736 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.6e-85 320.9 471 39.1
Nitab4.5_0005985g0040 Nicotiana tabacum HOM05D005919 ORTHO05D007176 1.6e-85 320.9 458 38.0
Gorai.010G092100 Gossypium raimondii HOM05D005919 ORTHO05D007176 2.1e-85 320.5 452 38.5
Lj4g0016840 Lotus japonicus HOM05D005919 ORTHO05D007176 2.7e-85 320.1 457 38.7
Solyc07g006330.2 Solanum lycopersicum HOM05D005919 ORTHO05D007176 2.7e-85 320.1 458 37.8
Dinv43316 Davidia involucrata HOM05D005919 ORTHO05D007176 3.6e-85 319.7 443 39.1
arahy.Tifrunner.gnm1.ann1.WJA0QS Arachis hypogaea HOM05D005919 ORTHO05D007176 6.1e-85 318.9 446 39.5
MELO3C005285.2 Cucumis melo HOM05D005919 ORTHO05D007176 7.9e-85 318.5 459 38.6
Psat4g048080 Pisum sativum HOM05D005919 ORTHO05D007176 7.9e-85 318.5 459 38.6
Glyma.13G091700 Glycine max HOM05D005919 ORTHO05D007176 1.0e-84 318.2 457 38.9
Lalb_Chr12g0199061 Lupinus albus HOM05D005919 ORTHO05D007176 3.0e-84 316.6 464 37.3
Os01g0580100 Oryza sativa ssp. japonica HOM05D005919 ORTHO05D007176 3.9e-84 316.2 460 39.1
Nitab4.5_0005551g0020 Nicotiana tabacum HOM05D005919 ORTHO05D007176 2.0e-83 313.9 470 37.9
HPP92_021127 Vanilla planifolia HOM05D005919 ORTHO05D007176 2.0e-83 313.9 454 37.9
VMungo1215G1350 Vigna mungo HOM05D005919 ORTHO05D007176 2.5e-83 313.5 457 38.1
TPR.G5290 Trifolium pratense HOM05D005919 ORTHO05D007176 4.3e-83 312.8 459 37.0
Haze_22168 Corylus avellana HOM05D005919 ORTHO05D007176 7.4e-83 312.0 465 38.5
Peaxi162Scf00525g00821 Petunia axillaris HOM05D005919 ORTHO05D007176 7.4e-83 312.0 457 37.2
Lj9A728G22 Lonicera japonica HOM05D005919 ORTHO05D007176 1.8e-81 307.4 483 36.9
Medtr4g129500 Medicago truncatula HOM05D005919 ORTHO05D007176 6.9e-81 305.4 456 37.5
Oeu035674.1 Olea europaea HOM05D005919 ORTHO05D007176 1.1e-78 298.1 463 36.3
Ca_21183_v3 Cicer arietinum L. HOM05D005919 ORTHO05D007176 2.5e-78 297.0 446 37.2
SGA_v2.0_scaffold7G04062 Striga asiatica HOM05D005919 ORTHO05D007176 2.7e-77 293.5 397 38.3
CDE02G0068 Ceratophyllum demersum HOM05D005919 ORTHO05D007176 4.8e-74 282.7 389 37.3
PSO782G2448 Papaver somniferum HOM05D005919 ORTHO05D007176 7.7e-72 275.4 417 37.4
SalBow1G6099 Salvia bowleyana HOM05D005919 ORTHO05D007176 1.9e-70 270.8 402 38.6
Dinv42785 Davidia involucrata HOM05D005919 ORTHO05D007176 1.6e-69 267.7 324 39.8
Hund26692 Selenicereus undatus HOM05D005919 ORTHO05D007176 2.6e-67 260.4 526 32.7
Zm00001eb229670 Zea mays HOM05D005919 ORTHO05D007176 3.2e-62 243.4 391 37.9
Dinv41305 Davidia involucrata HOM05D005919 ORTHO05D007176 6.1e-61 239.2 376 37.8
DCAR_011759 Daucus carota HOM05D005919 ORTHO05D007176 3.1e-57 226.9 372 35.8
vmacro13072 Vaccinium macrocarpon HOM05D005919 ORTHO05D007176 1.7e-55 221.1 331 36.0
Oeu031853.1 Olea europaea HOM05D005919 ORTHO05D007176 2.9e-55 220.3 329 37.4
Hma1.2p1_1531F.1_g289236 Hydrangea macrophylla HOM05D005919 ORTHO05D007176 1.9e-54 217.6 357 37.5
CARHR198500 Cardamine hirsuta HOM05D005919 ORTHO05D007176 2.3e-52 210.7 321 38.9
Sopen07g002420 Solanum pennellii HOM05D005919 ORTHO05D007176 3.4e-51 206.8 316 36.7
CiPaw.07G186600 Carya illinoinensis HOM05D005919 ORTHO05D007176 4.9e-50 203.0 314 38.9
arahy.Tifrunner.gnm1.ann1.IETZ0A Arachis hypogaea HOM05D005919 ORTHO05D007176 2.2e-42 177.6 229 40.2
SGA_v2.0_scaffold87G27166 Striga asiatica HOM05D005919 ORTHO05D007176 2.0e-40 171.0 444 30.0
FAN07G1390 Fragaria x ananassa HOM05D005919 ORTHO05D007176 1.3e-39 168.3 358 31.6
Gohir.D06G079000 Gossypium hirsutum HOM05D005919 ORTHO05D007176 1.2e-35 155.2 443 26.2
PRCOL_00000120 Prasinoderma coloniale HOM05D000722 ORTHO05D007176 1.2e-35 155.2 428 32.5
MD13G1260800 Malus domestica HOM05D005919 ORTHO05D007176 7.8e-32 142.5 225 38.2
COL.COLO4_04535 Corchorus olitorius HOM05D005919 ORTHO05D007176 2.1e-29 134.4 219 38.4
AUR62026693 Chenopodium quinoa HOM05D005919 ORTHO05D007176 1.5e-27 128.3 109 48.6
Actinidia20955 Actinidia chinensis HOM05D005919 ORTHO05D007176 1.4e-25 121.7 137 41.6
Psat4g010400 Pisum sativum HOM05D005919 ORTHO05D007176 9.2e-25 119.0 110 47.3
Glyma.17G068633 Glycine max HOM05D005919 ORTHO05D007176 1.8e-20 104.8 184 32.6
arahy.Tifrunner.gnm1.ann1.I3IQB6 Arachis hypogaea HOM05D005919 ORTHO05D007176 1.5e-11 75.1 171 33.3
Rhsim01G0011300 Rhododendron simsii HOM05D005919 ORTHO05D007176 1.7e-10 71.6 68 44.1
Zm00001eb050560 Zea mays HOM05D005919 ORTHO05D007176 4.3e-06 57.0 74 43.2
Zm00001eb260780 Zea mays HOM05D005919 ORTHO05D007176 4.3e-06 57.0 74 43.2
Zm00001eb302550 Zea mays HOM05D005919 ORTHO05D007176 4.3e-06 57.0 74 43.2


User provided reference genes

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