Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G324 Micromonas commoda HOM05D002981 ORTHO05D049051 6.1e-104 380.9 211 100.0
PRCOL_00003089 Prasinoderma coloniale HOM05D002981 ORTHO05D049051 2.8e-56 222.6 209 55.0
MCO03G057 Micromonas commoda HOM05D002981 ORTHO05D036811 5.5e-20 102.1 159 44.0
MCO16G478 Micromonas commoda HOM05D002981 ORTHO05D008255 1.2e-19 100.9 199 36.7
PRCOL_00005944 Prasinoderma coloniale HOM05D002981 ORTHO05D036811 5.7e-17 92.0 150 38.7
CBR_g3892 Chara braunii HOM05D000172 ORTHO05D008255 8.8e-10 68.2 105 39.0
AagrBONN_evm.TU.Sc2ySwM_228.808 Anthoceros agrestis HOM05D002981 ORTHO05D003725 2.8e-08 63.2 139 34.5
BcaB01g03165 Brassica carinata HOM05D002981 ORTHO05D003725 2.8e-08 63.2 117 30.8
Thhalv10001515m.g Eutrema salsugineum HOM05D002981 ORTHO05D003725 2.8e-08 63.2 149 28.9
Lsat_1_v5_gn_5_102801 Lactuca sativa HOM05D002981 ORTHO05D003725 2.8e-08 63.2 118 33.9
Pp3c4_19910 Physcomitrium patens HOM05D002981 ORTHO05D003725 2.8e-08 63.2 137 33.6
ECA234G2827 Erigeron canadensis HOM05D002981 ORTHO05D003725 4.8e-08 62.4 116 30.2
Aqoxy2G02802 Aquilegia oxysepala HOM05D002981 ORTHO05D003725 6.3e-08 62.0 160 27.5
Lj5g0008352 Lotus japonicus HOM05D002981 ORTHO05D003725 6.3e-08 62.0 118 31.4
Duzib138G0226 Durio zibethinus HOM05D002981 ORTHO05D003725 8.3e-08 61.6 124 35.5
Mapoly0016s0144 Marchantia polymorpha HOM05D002981 ORTHO05D003725 8.3e-08 61.6 146 30.8
Peaxi162Scf00673g00127 Petunia axillaris HOM05D002981 ORTHO05D003725 8.3e-08 61.6 129 34.1
Zm00001eb282710 Zea mays HOM05D002981 ORTHO05D003725 8.3e-08 61.6 142 31.0
CsaV3_7G029820 Cucumis sativus L. HOM05D002981 ORTHO05D003725 1.1e-07 61.2 123 33.3
CAN.G1273.1 Capsicum annuum HOM05D002981 ORTHO05D003725 1.4e-07 60.8 116 28.4
MD12G1207400 Malus domestica HOM05D002981 ORTHO05D003725 1.4e-07 60.8 134 33.6
PRCOL_00000310 Prasinoderma coloniale HOM05D000847 ORTHO05D003725 1.4e-07 60.8 110 27.3
Solyc01g100320.3 Solanum lycopersicum HOM05D002981 ORTHO05D003725 1.4e-07 60.8 116 29.3
arahy.Tifrunner.gnm1.ann1.VAQ4DL Arachis hypogaea HOM05D002981 ORTHO05D003725 1.8e-07 60.5 136 33.1
Carub.0004s3019 Capsella rubella HOM05D002981 ORTHO05D003725 1.8e-07 60.5 116 30.2
PSO761G0326 Papaver somniferum HOM05D002981 ORTHO05D003725 1.8e-07 60.5 124 32.3
SMO145G0025 Selaginella moellendorffii HOM05D007116 ORTHO05D008255 1.8e-07 60.5 70 41.4
Sopen01g043830 Solanum pennellii HOM05D002981 ORTHO05D003725 1.8e-07 60.5 116 29.3
PGSC0003DMG400002779 Solanum tuberosum HOM05D002981 ORTHO05D003725 1.8e-07 60.5 116 29.3
HPP92_016960 Vanilla planifolia HOM05D002981 ORTHO05D003725 1.8e-07 60.5 129 32.6
arahy.Tifrunner.gnm1.ann1.FDR7V2 Arachis hypogaea HOM05D002981 ORTHO05D003725 2.4e-07 60.1 136 33.1
BcaC01g05028 Brassica carinata HOM05D002981 ORTHO05D003725 2.4e-07 60.1 117 29.1
A03p25980 Brassica napus HOM05D002981 ORTHO05D003725 2.4e-07 60.1 117 29.1
C03p30980 Brassica napus HOM05D002981 ORTHO05D003725 2.4e-07 60.1 117 29.1
C04p00410 Brassica napus HOM05D002981 ORTHO05D003725 2.4e-07 60.1 149 28.2
BolC4t21686H Brassica oleracea HOM05D002981 ORTHO05D003725 2.4e-07 60.1 149 28.2
BraA03t11815Z Brassica rapa HOM05D002981 ORTHO05D003725 2.4e-07 60.1 117 29.1
CBR_g35008 Chara braunii HOM05D002981 ORTHO05D003725 2.4e-07 60.1 69 42.0
Os01g0339900 Oryza sativa ssp. japonica HOM05D002981 ORTHO05D003725 2.4e-07 60.1 116 30.2
unitig_26.g10138 Utricularia gibba HOM05D002981 ORTHO05D003725 2.4e-07 60.1 143 30.8
CiPaw.08G156600 Carya illinoinensis HOM05D002981 ORTHO05D003725 3.1e-07 59.7 130 35.4
Duzib133G0744 Durio zibethinus HOM05D002981 ORTHO05D003725 3.1e-07 59.7 118 33.1
Manes.09G175600 Manihot esculenta HOM05D002981 ORTHO05D003725 3.1e-07 59.7 134 32.8
SEGI_15151 Sequoiadendron giganteum HOM05D002981 ORTHO05D003725 3.1e-07 59.7 73 38.4
Cre07.g328150 Chlamydomonas reinhardtii HOM05D000172 ORTHO05D004529 4.1e-07 59.3 74 41.9
MELO3C015939.2 Cucumis melo HOM05D002981 ORTHO05D003725 4.1e-07 59.3 123 32.5
DCAR_025272 Daucus carota HOM05D002981 ORTHO05D003725 4.1e-07 59.3 116 33.6
Nitab4.5_0000368g0270 Nicotiana tabacum HOM05D002981 ORTHO05D003725 4.1e-07 59.3 144 30.6
Nitab4.5_0009033g0020 Nicotiana tabacum HOM05D002981 ORTHO05D003725 4.1e-07 59.3 116 29.3
Sp4g29410 Schrenkiella parvula HOM05D002981 ORTHO05D003725 4.1e-07 59.3 117 29.1
THA.LOC104817468 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 4.1e-07 59.3 116 29.3
VMungo0720G0399 Vigna mungo HOM05D002981 ORTHO05D003725 4.1e-07 59.3 132 33.3
AL4G47030 Arabidopsis lyrata HOM05D002981 ORTHO05D003725 5.4e-07 58.9 116 29.3
AT2G47470 Arabidopsis thaliana HOM05D002981 ORTHO05D003725 5.4e-07 58.9 116 29.3
A05p00460 Brassica napus HOM05D002981 ORTHO05D003725 5.4e-07 58.9 149 27.5
BraA05t19044Z Brassica rapa HOM05D002981 ORTHO05D003725 5.4e-07 58.9 149 27.5
CSS0025736 Camellia sinensis var. sinensis HOM05D002981 ORTHO05D003725 5.4e-07 58.9 119 31.1
Duzib211G0560 Durio zibethinus HOM05D002981 ORTHO05D003725 5.4e-07 58.9 118 32.2
Glyma.10G014700 Glycine max HOM05D002981 ORTHO05D003725 5.4e-07 58.9 126 34.1
HanXRQChr10g0299231 Helianthus annuus HOM05D002981 ORTHO05D003725 5.4e-07 58.9 116 28.4
Medtr1g087520 Medicago truncatula HOM05D002981 ORTHO05D003725 5.4e-07 58.9 126 33.3
PSO210G1046 Papaver somniferum HOM05D002981 ORTHO05D003725 5.4e-07 58.9 122 32.8
CANSAT54G0071 Cannabis sativa HOM05D002981 ORTHO05D003725 7.0e-07 58.5 156 25.0
DCAR_005415 Daucus carota HOM05D002981 ORTHO05D003725 7.0e-07 58.5 83 37.3
Gohir.D12G129900 Gossypium hirsutum HOM05D002981 ORTHO05D003725 7.0e-07 58.5 118 31.4
Gorai.008G141100 Gossypium raimondii HOM05D002981 ORTHO05D003725 7.0e-07 58.5 118 31.4
BcaB02g08769 Brassica carinata HOM05D002981 ORTHO05D003725 9.1e-07 58.2 139 25.9
Cc02_g34820 Coffea canephora HOM05D002981 ORTHO05D003725 9.1e-07 58.2 141 27.7
Glyma.02G014000 Glycine max HOM05D002981 ORTHO05D003725 9.1e-07 58.2 126 32.5
Phvul.001G225600 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 9.1e-07 58.2 116 29.3
Phvul.007G215900 Phaseolus vulgaris HOM05D002981 ORTHO05D003725 9.1e-07 58.2 126 33.3
DCAR_029360 Daucus carota HOM05D002981 ORTHO05D003725 1.2e-06 57.8 116 28.4
Gohir.A08G118600 Gossypium hirsutum HOM05D002981 ORTHO05D003725 1.2e-06 57.8 118 31.4
Gohir.D11G116000 Gossypium hirsutum HOM05D002981 ORTHO05D003725 1.2e-06 57.8 112 28.6
Psat6g163280 Pisum sativum HOM05D002981 ORTHO05D003725 1.2e-06 57.8 126 32.5
Aa31LG1G28770 Aethionema arabicum HOM05D002981 ORTHO05D003725 1.6e-06 57.4 116 28.4
SalBow3G0105 Salvia bowleyana HOM05D002981 ORTHO05D003725 1.6e-06 57.4 125 34.4
Cfa023759 Carpinus fangiana HOM05D002981 ORTHO05D003725 2.0e-06 57.0 197 27.4
COL.COLO4_23259 Corchorus olitorius HOM05D002981 ORTHO05D003725 2.0e-06 57.0 73 38.4
Sc16g0008930 Simmondsia chinensis HOM05D002981 ORTHO05D003725 2.0e-06 57.0 143 32.2
Thecc.01G310600 Theobroma cacao HOM05D002981 ORTHO05D003725 2.0e-06 57.0 116 26.7
CiPaw.07G115400 Carya illinoinensis HOM05D002981 ORTHO05D003725 2.7e-06 56.6 126 32.5
Gohir.A12G126400 Gossypium hirsutum HOM05D002981 ORTHO05D003725 2.7e-06 56.6 118 30.5
RcHm_v2.0_Chr3g0456861 Rosa chinensis HOM05D002981 ORTHO05D003725 2.7e-06 56.6 136 30.9
THA.LOC104802194 Tarenaya hassleriana HOM05D002981 ORTHO05D003725 2.7e-06 56.6 117 27.4
CDE02G3360 Ceratophyllum demersum HOM05D002981 ORTHO05D003725 3.5e-06 56.2 134 31.3
Haze_05013 Corylus avellana HOM05D002981 ORTHO05D003725 3.5e-06 56.2 118 31.4
Peaxi162Scf00071g00438 Petunia axillaris HOM05D002981 ORTHO05D003725 3.5e-06 56.2 129 31.8
PGR044G1530 Punica granatum HOM05D002981 ORTHO05D003725 3.5e-06 56.2 118 31.4
TPR.G19768 Trifolium pratense HOM05D002981 ORTHO05D003725 3.5e-06 56.2 118 31.4
vmacro01554 Vaccinium macrocarpon HOM05D002981 ORTHO05D003725 3.5e-06 56.2 131 29.8
EL10Ac4g09830 Beta vulgaris HOM05D002981 ORTHO05D003725 4.5e-06 55.8 119 34.5
CBR_g41286 Chara braunii HOM05D002981 ORTHO05D003725 4.5e-06 55.8 151 29.8
ClCG09G005250 Citrullus lanatus HOM05D002981 ORTHO05D003725 4.5e-06 55.8 116 27.6
unitig_21.g20026 Utricularia gibba HOM05D002981 ORTHO05D003725 4.5e-06 55.8 102 32.4
GSVIVG01031219001 Vitis vinifera HOM05D002981 ORTHO05D003725 4.5e-06 55.8 116 27.6
Ca_10298_v3 Cicer arietinum L. HOM05D002981 ORTHO05D003725 5.9e-06 55.5 118 32.2
Gorai.007G124200 Gossypium raimondii HOM05D002981 ORTHO05D003725 5.9e-06 55.5 123 31.7
Oeu053701.1 Olea europaea HOM05D002981 ORTHO05D003725 5.9e-06 55.5 116 28.4
Migut.N02114 Erythranthe guttata HOM05D002981 ORTHO05D003725 7.7e-06 55.1 157 25.5
FAN14G0083 Fragaria x ananassa HOM05D002981 ORTHO05D003725 7.7e-06 55.1 143 31.5
Oeu064809.1 Olea europaea HOM05D002981 ORTHO05D003725 7.7e-06 55.1 119 32.8
Hund07135 Selenicereus undatus HOM05D002981 ORTHO05D003725 7.7e-06 55.1 130 31.5


User provided reference genes

Program Settings