Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G305 Micromonas commoda HOM05D005399 ORTHO05D006347 0.0e+00 2248.4 1272 100.0
RcHm_v2.0_Chr4g0412561 Rosa chinensis HOM05D005399 ORTHO05D006347 7.9e-13 80.9 165 37.6
Cfa016169 Carpinus fangiana HOM05D005399 ORTHO05D006347 3.0e-12 79.0 157 35.7
CBR_g20108 Chara braunii HOM05D001969 ORTHO05D003463 3.0e-12 79.0 161 36.0
Ciclev10018828m.g Citrus clementina HOM05D005399 ORTHO05D006347 3.9e-12 78.6 154 36.4
Cc11_g00230 Coffea canephora HOM05D005399 ORTHO05D006347 3.9e-12 78.6 159 36.5
vmacro06433 Vaccinium macrocarpon HOM05D005399 ORTHO05D006347 3.9e-12 78.6 167 33.5
FvH4_4g12930 Fragaria vesca HOM05D005399 ORTHO05D006347 5.1e-12 78.2 165 37.0
FAN07G0819 Fragaria x ananassa HOM05D005399 ORTHO05D006347 8.8e-12 77.4 165 37.0
EL10Ac3g05189 Beta vulgaris HOM05D005399 ORTHO05D006347 1.1e-11 77.0 170 32.4
HanXRQChr15g0470151 Helianthus annuus HOM05D005399 ORTHO05D006347 1.1e-11 77.0 170 34.7
Lj3C896G2 Lonicera japonica HOM05D005399 ORTHO05D006347 1.1e-11 77.0 155 35.5
Oeu037969.1 Olea europaea HOM05D005399 ORTHO05D006347 1.1e-11 77.0 156 34.6
Actinidia34263 Actinidia chinensis HOM05D005399 ORTHO05D006347 2.0e-11 76.3 216 30.6
CiPaw.05G203600 Carya illinoinensis HOM05D005399 ORTHO05D006347 2.0e-11 76.3 167 35.3
ECA236G2916 Erigeron canadensis HOM05D005399 ORTHO05D006347 2.0e-11 76.3 165 34.5
SMO170G0037 Selaginella moellendorffii HOM05D005399 ORTHO05D006347 2.0e-11 76.3 155 32.3
Aqoxy5G00909 Aquilegia oxysepala HOM05D005399 ORTHO05D006347 2.6e-11 75.9 153 32.7
Haze_00285 Corylus avellana HOM05D005399 ORTHO05D006347 2.6e-11 75.9 157 35.0
FAN12G2064 Fragaria x ananassa HOM05D005399 ORTHO05D006347 2.6e-11 75.9 165 36.4
COL.COLO4_14362 Corchorus olitorius HOM05D005399 ORTHO05D006347 3.3e-11 75.5 162 32.1
TAR629G1213 Trochodendron aralioides HOM05D005399 ORTHO05D006347 3.3e-11 75.5 458 23.1
Nn3g18028 Nelumbo nucifera HOM05D005399 ORTHO05D006347 4.4e-11 75.1 155 30.3
Carub.0005s1567 Capsella rubella HOM05D005399 ORTHO05D006347 5.7e-11 74.7 159 34.6
GSVIVG01038634001 Vitis vinifera HOM05D005399 ORTHO05D006347 5.7e-11 74.7 158 38.0
Gohir.A08G105050 Gossypium hirsutum HOM05D005399 ORTHO05D006347 7.4e-11 74.3 161 34.2
AL5G29160 Arabidopsis lyrata HOM05D005399 ORTHO05D006347 9.7e-11 73.9 159 32.1
A01p24740 Brassica napus HOM05D005399 ORTHO05D006347 1.3e-10 73.6 159 34.0
BolC1t03020H Brassica oleracea HOM05D005399 ORTHO05D006347 1.3e-10 73.6 159 34.0
CARHR158370 Cardamine hirsuta HOM05D005399 ORTHO05D006347 1.3e-10 73.6 159 32.7
Gorai.004G124900 Gossypium raimondii HOM05D005399 ORTHO05D006347 1.3e-10 73.6 161 34.2
Lsat_1_v5_gn_7_13681 Lactuca sativa HOM05D005399 ORTHO05D006347 1.3e-10 73.6 161 33.5
Lalb_Chr03g0034521 Lupinus albus HOM05D005399 ORTHO05D006347 1.3e-10 73.6 208 29.3
QL09p007265 Quercus lobata HOM05D005399 ORTHO05D006347 1.3e-10 73.6 155 34.8
Sp5g12670 Schrenkiella parvula HOM05D005399 ORTHO05D006347 1.3e-10 73.6 167 32.3
AT3G49400 Arabidopsis thaliana HOM05D005399 ORTHO05D006347 1.7e-10 73.2 159 31.4
C01p30860 Brassica napus HOM05D005399 ORTHO05D006347 1.7e-10 73.2 159 34.0
BraA01t02386Z Brassica rapa HOM05D005399 ORTHO05D006347 1.7e-10 73.2 159 34.0
CSS0012529 Camellia sinensis var. sinensis HOM05D005399 ORTHO05D006347 1.7e-10 73.2 213 29.6
BcaB05g23117 Brassica carinata HOM05D005399 ORTHO05D006347 2.2e-10 72.8 159 33.3
ATR1089G058 Amborella trichopoda HOM05D005399 ORTHO05D006347 2.8e-10 72.4 181 30.4
Psat2g044800 Pisum sativum HOM05D005399 ORTHO05D006347 2.8e-10 72.4 156 32.7
Sed0017875 Sechium edule HOM05D005399 ORTHO05D006347 2.8e-10 72.4 167 32.3
Eucgr.H04750 Eucalyptus grandis HOM05D005399 ORTHO05D006347 4.8e-10 71.6 155 36.8
Aa31LG4G17950 Aethionema arabicum HOM05D005399 ORTHO05D006347 6.3e-10 71.2 158 31.6
Medtr1g059090 Medicago truncatula HOM05D005399 ORTHO05D006347 6.3e-10 71.2 191 29.8
SGA_v2.0_scaffold18G08460 Striga asiatica HOM05D005399 ORTHO05D006347 8.2e-10 70.9 158 33.5
Hma1.2p1_0094F.1_g047320 Hydrangea macrophylla HOM05D005399 ORTHO05D006347 1.1e-09 70.5 161 33.5
Dinv29217 Davidia involucrata HOM05D005399 ORTHO05D006347 1.4e-09 70.1 158 34.2
Gohir.D08G116000 Gossypium hirsutum HOM05D005399 ORTHO05D006347 1.4e-09 70.1 161 33.5
Zm00001eb211870 Zea mays HOM05D005399 ORTHO05D006347 1.4e-09 70.1 170 30.6
Sabra12G0011800 Salix brachista HOM05D005399 ORTHO05D006347 1.8e-09 69.7 154 32.5
Sabra05G0139800 Salix brachista HOM05D005399 ORTHO05D006347 2.4e-09 69.3 154 31.2
AagrBONN_evm.TU.Sc2ySwM_117.1095 Anthoceros agrestis HOM05D005399 ORTHO05D006347 3.1e-09 68.9 149 30.9
Potri.012G021900 Populus trichocarpa HOM05D005399 ORTHO05D006347 5.3e-09 68.2 154 31.2
THA.LOC104803340 Tarenaya hassleriana HOM05D005399 ORTHO05D006347 5.3e-09 68.2 159 33.3
Thecc.03G207700 Theobroma cacao HOM05D005399 ORTHO05D006347 5.3e-09 68.2 154 31.2
CAN.G65.216 Capsicum annuum HOM05D005399 ORTHO05D006347 9.1e-09 67.4 166 32.5
MD10G1005500 Malus domestica HOM05D005399 ORTHO05D006347 9.1e-09 67.4 181 32.0
CANSAT21G1620 Cannabis sativa HOM05D005399 ORTHO05D006347 1.2e-08 67.0 168 31.5
Duzib205G1241 Durio zibethinus HOM05D005399 ORTHO05D006347 1.2e-08 67.0 154 29.2
MD04G1021200 Malus domestica HOM05D005399 ORTHO05D006347 1.5e-08 66.6 181 32.0
CsaV3_2G029520 Cucumis sativus L. HOM05D005399 ORTHO05D006347 2.0e-08 66.2 162 31.5
Lj4g0025583 Lotus japonicus HOM05D005399 ORTHO05D006347 2.0e-08 66.2 194 29.9
HanXRQChr01g0023961 Helianthus annuus HOM05D005399 ORTHO05D006347 3.4e-08 65.5 153 33.3
Dinv07613 Davidia involucrata HOM05D005399 ORTHO05D006347 4.5e-08 65.1 158 32.9
Lj5g0008235 Lotus japonicus HOM05D005399 ORTHO05D006347 4.5e-08 65.1 211 27.0
Peaxi162Scf00526g00516 Petunia axillaris HOM05D005399 ORTHO05D006347 4.5e-08 65.1 166 32.5
Solyc06g073690.2 Solanum lycopersicum HOM05D005399 ORTHO05D006347 4.5e-08 65.1 166 30.7
PGR102G0827 Punica granatum HOM05D005399 ORTHO05D006347 5.9e-08 64.7 154 31.8
Sopen06g030090 Solanum pennellii HOM05D005399 ORTHO05D006347 5.9e-08 64.7 166 30.1
ClCG08G014290 Citrullus lanatus HOM05D005399 ORTHO05D006347 7.7e-08 64.3 162 32.1
Pp3c18_13210 Physcomitrium patens HOM05D005399 ORTHO05D006347 7.7e-08 64.3 176 26.7
Medtr5g077160 Medicago truncatula HOM05D005399 ORTHO05D006347 1.0e-07 63.9 177 27.7
PGSC0003DMG400005917 Solanum tuberosum HOM05D005399 ORTHO05D006347 1.3e-07 63.5 166 30.1
TWI39G1122 Tripterygium wilfordii HOM05D005399 ORTHO05D006347 1.3e-07 63.5 154 29.9
VMungo1080G0063 Vigna mungo HOM05D005399 ORTHO05D006347 1.3e-07 63.5 186 28.0
MSTRG.26983 Avicennia marina HOM05D005399 ORTHO05D006347 1.7e-07 63.2 167 28.7
Hund09706 Selenicereus undatus HOM05D005399 ORTHO05D006347 1.7e-07 63.2 270 27.0
MELO3C011011.2 Cucumis melo HOM05D005399 ORTHO05D006347 2.2e-07 62.8 152 31.6
Phvul.004G128800 Phaseolus vulgaris HOM05D005399 ORTHO05D006347 2.2e-07 62.8 211 27.5
Sc19g0000620 Simmondsia chinensis HOM05D005399 ORTHO05D006347 2.2e-07 62.8 155 31.0
Migut.F00156 Erythranthe guttata HOM05D005399 ORTHO05D006347 2.9e-07 62.4 156 32.7
DCAR_008979 Daucus carota HOM05D005399 ORTHO05D006347 3.8e-07 62.0 169 29.0
Os01g0702400 Oryza sativa ssp. japonica HOM05D005399 ORTHO05D006347 3.8e-07 62.0 155 30.3
arahy.Tifrunner.gnm1.ann1.CBX7CP Arachis hypogaea HOM05D005399 ORTHO05D006347 5.0e-07 61.6 162 30.2
VMungo0464G0254 Vigna mungo HOM05D005399 ORTHO05D006347 5.0e-07 61.6 163 30.1
TPR.G18894 Trifolium pratense HOM05D005399 ORTHO05D006347 1.1e-06 60.5 154 31.2
Glyma.10G094100 Glycine max HOM05D005399 ORTHO05D006347 1.4e-06 60.1 163 28.2
arahy.Tifrunner.gnm1.ann1.GD33A2 Arachis hypogaea HOM05D005399 ORTHO05D006347 2.5e-06 59.3 162 29.6
arahy.Tifrunner.gnm1.ann1.MB6KVE Arachis hypogaea HOM05D005399 ORTHO05D006347 2.5e-06 59.3 162 29.6


User provided reference genes

Program Settings