Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G159 Micromonas commoda HOM05D006549 ORTHO05D008080 1.9e-156 555.8 291 100.0
SMO013G0006 Selaginella moellendorffii HOM05D006549 ORTHO05D008080 1.2e-25 121.3 271 32.5
Sed0027042 Sechium edule HOM05D006549 ORTHO05D008080 1.5e-23 114.4 199 34.2
Nitab4.5_0006878g0020 Nicotiana tabacum HOM05D006549 ORTHO05D008080 3.6e-22 109.8 190 35.3
CsaV3_1G043000 Cucumis sativus L. HOM05D006549 ORTHO05D008080 4.8e-22 109.4 204 34.3
Nitab4.5_0002726g0080 Nicotiana tabacum HOM05D006549 ORTHO05D008080 4.8e-22 109.4 190 34.7
COL.COLO4_36476 Corchorus olitorius HOM05D006549 ORTHO05D008080 1.1e-21 108.2 133 39.8
Gohir.D09G108300 Gossypium hirsutum HOM05D006549 ORTHO05D008080 1.1e-21 108.2 191 33.5
ECA238G1745 Erigeron canadensis HOM05D006549 ORTHO05D008080 1.4e-21 107.8 194 35.1
Mapoly0091s0083 Marchantia polymorpha HOM05D006549 ORTHO05D008080 1.4e-21 107.8 202 34.7
Nn7g36445 Nelumbo nucifera HOM05D006549 ORTHO05D008080 1.4e-21 107.8 177 36.7
Gorai.006G126000 Gossypium raimondii HOM05D006549 ORTHO05D008080 1.8e-21 107.5 191 33.5
Gohir.A09G111700 Gossypium hirsutum HOM05D006549 ORTHO05D008080 2.4e-21 107.1 191 33.5
AT5G12410 Arabidopsis thaliana HOM05D006549 ORTHO05D008080 3.1e-21 106.7 194 34.5
ClCG03G013060 Citrullus lanatus HOM05D006549 ORTHO05D008080 3.1e-21 106.7 195 33.3
Lju41A40T23 Lonicera japonica HOM05D006549 ORTHO05D008080 3.1e-21 106.7 217 32.7
Duzib170G0947 Durio zibethinus HOM05D006549 ORTHO05D008080 4.0e-21 106.3 219 34.7
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 4.0e-21 106.3 205 34.6
Solyc11g065180.2 Solanum lycopersicum HOM05D006549 ORTHO05D008080 4.0e-21 106.3 205 37.1
AagrBONN_evm.TU.Sc2ySwM_228.1610 Anthoceros agrestis HOM05D006549 ORTHO05D008080 5.3e-21 105.9 268 30.6
PSO384G3463 Papaver somniferum HOM05D006549 ORTHO05D008080 5.3e-21 105.9 177 36.2
C03p06560 Brassica napus HOM05D006549 ORTHO05D008080 6.9e-21 105.5 199 34.7
Ciclev10015584m.g Citrus clementina HOM05D006549 ORTHO05D008080 6.9e-21 105.5 205 34.1
A10p25410 Brassica napus HOM05D006549 ORTHO05D008080 9.0e-21 105.1 206 35.0
BolC3t13156H Brassica oleracea HOM05D006549 ORTHO05D008080 9.0e-21 105.1 264 30.7
FAN16G0297 Fragaria x ananassa HOM05D006549 ORTHO05D008080 9.0e-21 105.1 159 35.2
Sopen11g024900 Solanum pennellii HOM05D006549 ORTHO05D008080 9.0e-21 105.1 205 36.6
PGSC0003DMG400031244 Solanum tuberosum HOM05D006549 ORTHO05D008080 9.0e-21 105.1 205 36.6
Aqoxy1G00310 Aquilegia oxysepala HOM05D006549 ORTHO05D008080 1.2e-20 104.8 195 36.4
CAN.G633.4 Capsicum annuum HOM05D006549 ORTHO05D008080 1.2e-20 104.8 190 35.8
BraA10t44605Z Brassica rapa HOM05D006549 ORTHO05D008080 2.0e-20 104.0 214 33.2
AL6G23210 Arabidopsis lyrata HOM05D006549 ORTHO05D008080 2.6e-20 103.6 194 34.0
AUR62000165 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.6e-20 103.6 195 35.4
Cc01_g06100 Coffea canephora HOM05D006549 ORTHO05D008080 2.6e-20 103.6 220 31.4
HanXRQChr14g0433001 Helianthus annuus HOM05D006549 ORTHO05D008080 2.6e-20 103.6 202 33.2
Lsat_1_v5_gn_2_29261 Lactuca sativa HOM05D006549 ORTHO05D008080 2.6e-20 103.6 195 32.8
THA.LOC104811185 Tarenaya hassleriana HOM05D006549 ORTHO05D008080 2.6e-20 103.6 190 34.2
C09p64480 Brassica napus HOM05D006549 ORTHO05D008080 3.4e-20 103.2 214 33.2
BolC9t59282H Brassica oleracea HOM05D006549 ORTHO05D008080 3.4e-20 103.2 214 33.2
PGR102G0709 Punica granatum HOM05D006549 ORTHO05D008080 3.4e-20 103.2 226 32.7
SEGI_14205 Sequoiadendron giganteum HOM05D006549 ORTHO05D008080 3.4e-20 103.2 199 34.2
Zm00001eb200070 Zea mays HOM05D006549 ORTHO05D008080 3.4e-20 103.2 182 33.5
PSO339G6663 Papaver somniferum HOM05D006549 ORTHO05D008080 5.8e-20 102.4 177 35.6
PRCOL_00001563 Prasinoderma coloniale HOM05D006549 ORTHO05D008080 5.8e-20 102.4 291 32.0
BraA03t09898Z Brassica rapa HOM05D006549 ORTHO05D008080 7.6e-20 102.1 264 31.1
VMungo1215G3210 Vigna mungo HOM05D006549 ORTHO05D008080 7.6e-20 102.1 184 35.3
A03p05610 Brassica napus HOM05D006549 ORTHO05D008080 9.9e-20 101.7 264 31.1
Migut.N02355 Erythranthe guttata HOM05D006549 ORTHO05D008080 9.9e-20 101.7 194 32.0
Glyma.01G226800 Glycine max HOM05D006549 ORTHO05D008080 9.9e-20 101.7 188 33.5
RcHm_v2.0_Chr5g0051211 Rosa chinensis HOM05D006549 ORTHO05D008080 9.9e-20 101.7 209 33.0
GSVIVG01031548001 Vitis vinifera HOM05D006549 ORTHO05D008080 9.9e-20 101.7 190 33.2
EL10Ac4g10185 Beta vulgaris HOM05D006549 ORTHO05D008080 1.3e-19 101.3 198 32.3
Phvul.002G033900 Phaseolus vulgaris HOM05D006549 ORTHO05D008080 1.3e-19 101.3 208 35.6
CARHR200690 Cardamine hirsuta HOM05D006549 ORTHO05D008080 1.7e-19 100.9 199 33.7
Carub.0006s1091 Capsella rubella HOM05D006549 ORTHO05D008080 2.2e-19 100.5 206 33.0
Dinv22152 Davidia involucrata HOM05D006549 ORTHO05D008080 2.2e-19 100.5 205 34.1
Dinv36213 Davidia involucrata HOM05D006549 ORTHO05D008080 2.2e-19 100.5 193 33.2
Thhalv10013724m.g Eutrema salsugineum HOM05D006549 ORTHO05D008080 2.2e-19 100.5 206 33.0
Oeu061298.1 Olea europaea HOM05D006549 ORTHO05D008080 2.2e-19 100.5 215 31.2
Aa31LG3G14820 Aethionema arabicum HOM05D006549 ORTHO05D008080 2.9e-19 100.1 208 31.7
AUR62039846 Chenopodium quinoa HOM05D006549 ORTHO05D008080 2.9e-19 100.1 206 34.0
Glyma.11G015900 Glycine max HOM05D006549 ORTHO05D008080 2.9e-19 100.1 200 33.5
MBI13_g04769_MAGBIO Magnolia biondii HOM05D006549 ORTHO05D008080 2.9e-19 100.1 198 34.3
Pp3c3_2270 Physcomitrium patens HOM05D006549 ORTHO05D008080 2.9e-19 100.1 214 30.8
Sp6g31230 Schrenkiella parvula HOM05D006549 ORTHO05D008080 2.9e-19 100.1 199 33.7
QL01p018092 Quercus lobata HOM05D006549 ORTHO05D008080 3.8e-19 99.8 208 33.7
SGA_v2.0_scaffold42G16082 Striga asiatica HOM05D006549 ORTHO05D008080 3.8e-19 99.8 190 31.1
CANSAT54G0570 Cannabis sativa HOM05D006549 ORTHO05D008080 4.9e-19 99.4 208 32.2
Psat2g186960 Pisum sativum HOM05D000745 ORTHO05D000641 4.9e-19 99.4 190 31.6
TPR.G38023 Trifolium pratense HOM05D006549 ORTHO05D008080 4.9e-19 99.4 193 31.1
unitig_27.g25003 Utricularia gibba HOM05D006549 ORTHO05D008080 4.9e-19 99.4 201 30.8
FvH4_3g28330 Fragaria vesca HOM05D006549 ORTHO05D008080 6.4e-19 99.0 209 32.1
FAN11G3700 Fragaria x ananassa HOM05D006549 ORTHO05D008080 6.4e-19 99.0 209 32.1
FAN21G3651 Fragaria x ananassa HOM05D006549 ORTHO05D008080 6.4e-19 99.0 209 32.5
LjContig00222g0000121 Lotus japonicus HOM05D006549 ORTHO05D008080 6.4e-19 99.0 188 31.4
Thecc.09G240800 Theobroma cacao HOM05D006549 ORTHO05D008080 6.4e-19 99.0 222 32.0
Ah.06g193800 Amaranthus hybridus HOM05D006549 ORTHO05D008080 8.4e-19 98.6 207 31.4
Actinidia16353 Actinidia chinensis HOM05D006549 ORTHO05D008080 1.1e-18 98.2 199 33.7
CiPaw.13G153800 Carya illinoinensis HOM05D006549 ORTHO05D008080 1.1e-18 98.2 209 33.5
TAR633G0410 Trochodendron aralioides HOM05D006549 ORTHO05D008080 1.1e-18 98.2 133 38.3
Hund07453 Selenicereus undatus HOM05D006549 ORTHO05D008080 1.4e-18 97.8 192 33.9
Sc09g0000890 Simmondsia chinensis HOM05D006549 ORTHO05D008080 1.4e-18 97.8 220 32.3
TWI39G1226 Tripterygium wilfordii HOM05D006549 ORTHO05D008080 1.4e-18 97.8 184 34.2
Actinidia06932 Actinidia chinensis HOM05D006549 ORTHO05D008080 1.9e-18 97.4 190 32.6
DCAR_000660 Daucus carota HOM05D006549 ORTHO05D008080 1.9e-18 97.4 199 32.2
Medtr5g009010 Medicago truncatula HOM05D006549 ORTHO05D008080 1.9e-18 97.4 251 29.1
MSTRG.17620 Avicennia marina HOM05D006549 ORTHO05D008080 2.4e-18 97.1 249 28.1
Potri.001G254600 Populus trichocarpa HOM05D006549 ORTHO05D008080 2.4e-18 97.1 212 31.6
vmacro04120 Vaccinium macrocarpon HOM05D006549 ORTHO05D008080 2.4e-18 97.1 204 32.4
MD11G1187800 Malus domestica HOM05D006549 ORTHO05D008080 3.2e-18 96.7 193 32.1
Manes.14G005500 Manihot esculenta HOM05D006549 ORTHO05D008080 3.2e-18 96.7 224 29.5
arahy.Tifrunner.gnm1.ann1.2W4GIE Arachis hypogaea HOM05D006549 ORTHO05D008080 4.2e-18 96.3 202 32.7
CSS0047891 Camellia sinensis var. sinensis HOM05D006549 ORTHO05D008080 4.2e-18 96.3 191 31.9
MD03G1170300 Malus domestica HOM05D006549 ORTHO05D008080 4.2e-18 96.3 193 31.1
Potri.009G049700 Populus trichocarpa HOM05D006549 ORTHO05D008080 4.2e-18 96.3 213 31.0
Prupe.4G256800 Prunus persica HOM05D006549 ORTHO05D008080 4.2e-18 96.3 190 32.6
ATR0721G160 Amborella trichopoda HOM05D006549 ORTHO05D008080 5.4e-18 95.9 190 33.2
Oeu025891.1 Olea europaea HOM05D006549 ORTHO05D008080 7.1e-18 95.5 240 27.9
CDE08G0181 Ceratophyllum demersum HOM05D006549 ORTHO05D008080 9.3e-18 95.1 231 29.9
Os11g0568600 Oryza sativa ssp. japonica HOM05D006549 ORTHO05D008080 1.6e-17 94.4 181 30.4
Lalb_Chr09g0320561 Lupinus albus HOM05D006549 ORTHO05D008080 2.7e-17 93.6 202 32.2
Ca_24492_v3 Cicer arietinum L. HOM05D000745 ORTHO05D000641 3.5e-17 93.2 178 30.9
Eucgr.B03712 Eucalyptus grandis HOM05D006549 ORTHO05D008080 3.5e-17 93.2 216 29.6
Rhsim13G0217400 Rhododendron simsii HOM05D002345 ORTHO05D002391 7.9e-17 92.0 197 31.0
Atru.chr3.2633 Acer truncatum HOM05D006549 ORTHO05D008080 6.7e-16 89.0 182 33.0
arahy.Tifrunner.gnm1.ann1.9560XR Arachis hypogaea HOM05D006549 ORTHO05D008080 1.1e-15 88.2 235 28.9
BcaB01g05403 Brassica carinata HOM05D006549 ORTHO05D008080 1.1e-15 88.2 113 40.7
Haze_23190 Corylus avellana HOM05D006549 ORTHO05D008080 1.9e-15 87.4 172 33.1
Hma1.2p1_1043F.1_g251200 Hydrangea macrophylla HOM05D006549 ORTHO05D008080 1.9e-15 87.4 135 34.1
Cc01_g06170 Coffea canephora HOM05D006549 ORTHO05D008080 4.3e-15 86.3 113 38.9
CBR_g300 Chara braunii HOM05D006549 ORTHO05D008080 2.1e-14 84.0 257 29.2
QL01p018141 Quercus lobata HOM05D006549 ORTHO05D008080 1.1e-13 81.6 200 31.5
Sabra09G0036200 Salix brachista HOM05D006549 ORTHO05D008080 2.4e-13 80.5 267 27.0
SHI46597 Sapria himalayana HOM05D006549 ORTHO05D008080 1.2e-09 68.2 87 35.6
Sabra16G0155200 Salix brachista HOM05D006549 ORTHO05D008080 1.8e-08 64.3 80 38.8
Cre14.g629550 Chlamydomonas reinhardtii HOM05D006549 ORTHO05D008080 8.7e-08 62.0 203 25.6
Duzib168G0228 Durio zibethinus HOM05D006549 ORTHO05D008080 3.3e-07 60.1 177 26.6
MELO3C029487.2 Cucumis melo HOM05D006549 ORTHO05D008080 3.7e-06 56.6 58 43.1


User provided reference genes

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