Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G146 Micromonas commoda HOM05D004930 ORTHO05D270306 7.6e-295 1016.5 552 100.0
AagrBONN_evm.TU.Sc2ySwM_344.3947 Anthoceros agrestis HOM05D000001 ORTHO05D000003 1.3e-15 89.0 278 29.1
ECA236G4599 Erigeron canadensis HOM05D004930 ORTHO05D006531 6.3e-15 86.7 232 28.9
HanXRQChr11g0333531 Helianthus annuus HOM05D004930 ORTHO05D006531 1.1e-14 85.9 246 28.9
SMO145G0200 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 4.1e-14 84.0 234 28.2
SGA_v2.0_scaffold145G36067 Striga asiatica HOM05D004930 ORTHO05D006531 6.9e-14 83.2 235 28.5
TAR628G0980 Trochodendron aralioides HOM05D004930 ORTHO05D006531 1.5e-13 82.0 235 26.8
Nn1g08650 Nelumbo nucifera HOM05D004930 ORTHO05D006531 2.0e-13 81.6 249 26.5
Atru.chr6.830 Acer truncatum HOM05D004930 ORTHO05D006531 2.6e-13 81.3 248 27.4
AL1G47670 Arabidopsis lyrata HOM05D004930 ORTHO05D006531 2.6e-13 81.3 239 28.5
Rhsim05G0119100 Rhododendron simsii HOM05D004930 ORTHO05D006531 2.6e-13 81.3 235 27.7
Cpa.g.sc2.5 Carica papaya HOM05D004930 ORTHO05D006531 3.4e-13 80.9 245 28.6
TAR376G0678 Trochodendron aralioides HOM05D004930 ORTHO05D006531 4.5e-13 80.5 235 26.8
GSVIVG01022999001 Vitis vinifera HOM05D004930 ORTHO05D006531 5.9e-13 80.1 233 27.0
Cfa005536 Carpinus fangiana HOM05D004930 ORTHO05D006531 1.0e-12 79.3 259 26.6
COL.COLO4_17882 Corchorus olitorius HOM05D004930 ORTHO05D006531 1.0e-12 79.3 248 26.6
Lsat_1_v5_gn_7_77761 Lactuca sativa HOM05D004930 ORTHO05D006531 1.0e-12 79.3 232 27.2
Sc07g0007240 Simmondsia chinensis HOM05D004930 ORTHO05D006531 1.0e-12 79.3 232 27.2
Carub.0001s3147 Capsella rubella HOM05D004930 ORTHO05D006531 1.3e-12 79.0 235 27.7
ATR0684G093 Amborella trichopoda HOM05D004930 ORTHO05D006531 1.7e-12 78.6 249 26.5
CDE05G0822 Ceratophyllum demersum HOM05D004930 ORTHO05D006531 2.2e-12 78.2 233 26.2
AT1G33270 Arabidopsis thaliana HOM05D004930 ORTHO05D006531 2.9e-12 77.8 256 28.1
TWI59G0754 Tripterygium wilfordii HOM05D004930 ORTHO05D006531 3.8e-12 77.4 235 25.1
CAN.G1577.7 Capsicum annuum HOM05D004930 ORTHO05D006531 5.0e-12 77.0 254 27.2
Actinidia39050 Actinidia chinensis HOM05D004930 ORTHO05D006531 6.5e-12 76.6 232 26.7
CiPaw.06G148500 Carya illinoinensis HOM05D004930 ORTHO05D006531 6.5e-12 76.6 260 27.3
Eucgr.G00613 Eucalyptus grandis HOM05D004930 ORTHO05D006531 6.5e-12 76.6 235 26.8
CsaV3_3G018910 Cucumis sativus L. HOM05D004930 ORTHO05D006531 8.5e-12 76.3 245 27.3
Duzib248G0906 Durio zibethinus HOM05D004930 ORTHO05D006531 8.5e-12 76.3 248 26.2
Aqoxy5G02422 Aquilegia oxysepala HOM05D004930 ORTHO05D006531 1.1e-11 75.9 232 25.9
EL10Ac6g15372 Beta vulgaris HOM05D004930 ORTHO05D006531 1.1e-11 75.9 295 25.4
SEGI_13232 Sequoiadendron giganteum HOM05D004930 ORTHO05D006531 1.1e-11 75.9 234 25.2
DCAR_001819 Daucus carota HOM05D004930 ORTHO05D006531 1.4e-11 75.5 235 26.0
Mapoly0101s0012 Marchantia polymorpha HOM05D004930 ORTHO05D006531 1.4e-11 75.5 252 26.6
PSO170G4712 Papaver somniferum HOM05D004930 ORTHO05D006531 1.4e-11 75.5 251 27.5
ClCG05G009760 Citrullus lanatus HOM05D004930 ORTHO05D006531 1.9e-11 75.1 247 26.3
MELO3C019485.2 Cucumis melo HOM05D004930 ORTHO05D006531 1.9e-11 75.1 245 26.9
Potri.001G209500 Populus trichocarpa HOM05D004930 ORTHO05D006531 1.9e-11 75.1 249 25.7
Aa31LG6G7800 Aethionema arabicum HOM05D004930 ORTHO05D006531 3.2e-11 74.3 234 26.9
PGSC0003DMG400023754 Solanum tuberosum HOM05D004930 ORTHO05D006531 3.2e-11 74.3 254 26.4
Solyc01g104310.3 Solanum lycopersicum HOM05D004930 ORTHO05D006531 4.2e-11 73.9 248 26.6
Gohir.D08G010200 Gossypium hirsutum HOM05D004930 ORTHO05D006531 5.5e-11 73.6 244 25.4
Gorai.004G003500 Gossypium raimondii HOM05D004930 ORTHO05D006531 5.5e-11 73.6 244 25.4
Potri.003G020800 Populus trichocarpa HOM05D004930 ORTHO05D006531 7.2e-11 73.2 257 25.3
Nitab4.5_0011195g0040 Nicotiana tabacum HOM05D004930 ORTHO05D006531 9.4e-11 72.8 269 26.4
Sopen01g046750 Solanum pennellii HOM05D004930 ORTHO05D006531 9.4e-11 72.8 266 25.9
CARHR032640 Cardamine hirsuta HOM05D004930 ORTHO05D006531 1.6e-10 72.0 235 25.5
CBR_g22336 Chara braunii HOM05D004930 ORTHO05D006531 1.6e-10 72.0 172 30.8
AUR62017811 Chenopodium quinoa HOM05D004930 ORTHO05D006531 1.6e-10 72.0 245 25.3
Os11g0546300 Oryza sativa ssp. japonica HOM05D004930 ORTHO05D006531 2.1e-10 71.6 249 25.7
Thecc.02G040000 Theobroma cacao HOM05D004930 ORTHO05D006531 2.1e-10 71.6 245 26.5
CSS0021494 Camellia sinensis var. sinensis HOM05D004930 ORTHO05D006531 2.7e-10 71.2 267 25.5
THA.LOC104810264 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.6e-10 70.9 311 25.4
Ciclev10001315m.g Citrus clementina HOM05D004930 ORTHO05D006531 4.7e-10 70.5 247 25.5
Gohir.A08G000149 Gossypium hirsutum HOM05D004930 ORTHO05D006531 4.7e-10 70.5 244 25.0
Gohir.A01G001000 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.4e-09 68.9 245 26.1
Gohir.D01G000700 Gossypium hirsutum HOM05D004930 ORTHO05D006531 1.4e-09 68.9 245 26.1
Gorai.002G001200 Gossypium raimondii HOM05D004930 ORTHO05D006531 1.8e-09 68.6 245 26.1
Nitab4.5_0002245g0180 Nicotiana tabacum HOM05D004930 ORTHO05D006531 5.1e-09 67.0 253 26.9
HPP92_002187 Vanilla planifolia HOM05D004930 ORTHO05D006531 8.8e-09 66.2 160 27.5
MBI03_g28294_MAGBIO Magnolia biondii HOM05D004930 ORTHO05D006531 1.1e-08 65.9 260 25.4
PGR042G0956 Punica granatum HOM05D004930 ORTHO05D006531 1.5e-08 65.5 267 24.7
Hund04330 Selenicereus undatus HOM05D004930 ORTHO05D006531 2.0e-08 65.1 251 25.1
SMO139G0053 Selaginella moellendorffii HOM05D004930 ORTHO05D006531 3.3e-08 64.3 217 26.3
QL02p098488 Quercus lobata HOM05D004930 ORTHO05D006531 2.8e-07 61.2 160 28.8
Dinv19356 Davidia involucrata HOM05D004930 ORTHO05D006531 3.7e-07 60.8 160 28.1
vmacro01769 Vaccinium macrocarpon HOM05D004930 ORTHO05D006531 1.1e-06 59.3 243 24.3
THA.LOC104813074 Tarenaya hassleriana HOM05D004930 ORTHO05D006531 3.1e-06 57.8 210 25.2


User provided reference genes

Program Settings