Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G139 Micromonas commoda HOM05D005847 ORTHO05D007143 0.0e+00 1442.9 782 100.0
Pp3c9_6890 Physcomitrium patens HOM05D005847 ORTHO05D007143 2.5e-41 174.9 623 28.7
Mapoly0031s0174 Marchantia polymorpha HOM05D005847 ORTHO05D007143 2.0e-35 155.2 516 28.7
Sed0023920 Sechium edule HOM05D005847 ORTHO05D007143 1.0e-34 152.9 522 27.8
FAN08G0147 Fragaria x ananassa HOM05D005847 ORTHO05D007143 3.8e-34 151.0 529 27.8
Hund18289 Selenicereus undatus HOM05D005847 ORTHO05D007143 6.5e-34 150.2 507 27.4
Gohir.D12G239600 Gossypium hirsutum HOM05D005847 ORTHO05D007143 8.5e-34 149.8 503 28.0
Gorai.008G256700 Gossypium raimondii HOM05D005847 ORTHO05D007143 8.5e-34 149.8 503 28.0
MD06G1113800 Malus domestica HOM05D005847 ORTHO05D007143 1.1e-33 149.4 499 27.5
Atru.chr9.1922 Acer truncatum HOM05D005847 ORTHO05D007143 1.5e-33 149.1 527 27.5
Manes.01G053800 Manihot esculenta HOM05D005847 ORTHO05D007143 1.5e-33 149.1 506 27.9
Eucgr.E01030 Eucalyptus grandis HOM05D005847 ORTHO05D007143 2.5e-33 148.3 510 27.6
Medtr8g040700 Medicago truncatula HOM05D005847 ORTHO05D007143 2.5e-33 148.3 505 27.1
CANSAT21G1860 Cannabis sativa HOM05D005847 ORTHO05D007143 3.2e-33 147.9 525 29.5
FAN13G1107 Fragaria x ananassa HOM05D005847 ORTHO05D007143 7.2e-33 146.7 525 26.5
Carub.0002s0014 Capsella rubella HOM05D005847 ORTHO05D007143 1.2e-32 146.0 512 29.9
RcHm_v2.0_Chr2g0164461 Rosa chinensis HOM05D005847 ORTHO05D007143 1.2e-32 146.0 497 27.6
Duzib084G0923 Durio zibethinus HOM05D005847 ORTHO05D007143 1.6e-32 145.6 504 27.4
Gohir.A12G238500 Gossypium hirsutum HOM05D005847 ORTHO05D007143 1.6e-32 145.6 503 27.0
MD14G1134800 Malus domestica HOM05D005847 ORTHO05D007143 1.6e-32 145.6 487 27.3
FAN04G0204 Fragaria x ananassa HOM05D005847 ORTHO05D007143 2.7e-32 144.8 525 26.5
EL10Ac5g12470 Beta vulgaris HOM05D005847 ORTHO05D007143 3.6e-32 144.4 504 27.2
Prupe.5G126500 Prunus persica HOM05D005847 ORTHO05D007143 3.6e-32 144.4 522 26.4
Sopen08g031110 Solanum pennellii HOM05D005847 ORTHO05D007143 6.1e-32 143.7 529 26.8
THA.LOC104809314 Tarenaya hassleriana HOM05D005847 ORTHO05D007143 8.0e-32 143.3 509 26.9
Cc08_g16520 Coffea canephora HOM05D005847 ORTHO05D007143 1.4e-31 142.5 506 27.3
MELO3C005771.2 Cucumis melo HOM05D005847 ORTHO05D007143 1.4e-31 142.5 523 27.7
CsaV3_5G001820 Cucumis sativus L. HOM05D005847 ORTHO05D007143 1.4e-31 142.5 527 27.3
DCAR_006499 Daucus carota HOM05D005847 ORTHO05D007143 1.8e-31 142.1 528 27.1
Ciclev10019764m.g Citrus clementina HOM05D005847 ORTHO05D007143 2.3e-31 141.7 530 26.6
FvH4_5g11440 Fragaria vesca HOM05D005847 ORTHO05D007143 2.3e-31 141.7 525 26.3
Thecc.03G224700 Theobroma cacao HOM05D005847 ORTHO05D007143 3.0e-31 141.4 521 26.1
AT1G64600 Arabidopsis thaliana HOM05D005847 ORTHO05D007143 4.0e-31 141.0 527 27.7
ECA240G1801 Erigeron canadensis HOM05D005847 ORTHO05D007143 5.2e-31 140.6 527 27.3
Solyc08g082880.4 Solanum lycopersicum HOM05D005847 ORTHO05D007143 5.2e-31 140.6 529 26.7
Phvul.011G200000 Phaseolus vulgaris HOM05D005847 ORTHO05D007143 6.8e-31 140.2 480 26.9
GSVIVG01019613001 Vitis vinifera HOM05D005847 ORTHO05D007143 6.8e-31 140.2 509 29.1
Potri.001G086800 Populus trichocarpa HOM05D005847 ORTHO05D007143 8.8e-31 139.8 523 28.9
Sc01g0010500 Simmondsia chinensis HOM05D005847 ORTHO05D007143 8.8e-31 139.8 507 27.8
HanXRQChr13g0415001 Helianthus annuus HOM05D005847 ORTHO05D007143 1.2e-30 139.4 497 27.0
PSO017G1852 Papaver somniferum HOM05D005847 ORTHO05D007143 1.2e-30 139.4 521 29.2
Haze_09129 Corylus avellana HOM05D005847 ORTHO05D007143 1.5e-30 139.0 528 29.7
Lj2A159T44 Lonicera japonica HOM05D005847 ORTHO05D007143 1.5e-30 139.0 529 28.4
TPR.G8535 Trifolium pratense HOM05D005847 ORTHO05D007143 1.5e-30 139.0 484 28.9
BcaB07g31478 Brassica carinata HOM05D005847 ORTHO05D007143 2.0e-30 138.7 513 28.3
Cfa011951 Carpinus fangiana HOM05D005847 ORTHO05D007143 2.0e-30 138.7 526 29.3
CAN.G567.67 Capsicum annuum HOM05D005847 ORTHO05D007143 2.6e-30 138.3 526 29.1
AL2G10160 Arabidopsis lyrata HOM05D005847 ORTHO05D007143 3.4e-30 137.9 512 27.9
A09p14540 Brassica napus HOM05D005847 ORTHO05D007143 3.4e-30 137.9 513 29.2
VMungo1127G1163 Vigna mungo HOM05D005847 ORTHO05D007143 3.4e-30 137.9 505 25.9
BcaC04g22588 Brassica carinata HOM05D005847 ORTHO05D007143 4.4e-30 137.5 513 29.2
C09p17640 Brassica napus HOM05D005847 ORTHO05D007143 4.4e-30 137.5 513 29.2
BolC9t54656H Brassica oleracea HOM05D005847 ORTHO05D007143 4.4e-30 137.5 513 29.2
FAN18G1068 Fragaria x ananassa HOM05D005847 ORTHO05D007143 4.4e-30 137.5 525 25.7
BraA09t37102Z Brassica rapa HOM05D005847 ORTHO05D007143 1.3e-29 136.0 513 29.0
Psat4g194080 Pisum sativum HOM05D005847 ORTHO05D007143 1.3e-29 136.0 479 27.3
QL10p008953 Quercus lobata HOM05D005847 ORTHO05D007143 1.3e-29 136.0 483 27.7
Glyma.13G191700 Glycine max HOM05D005847 ORTHO05D007143 1.7e-29 135.6 493 29.8
Os07g0297300 Oryza sativa ssp. japonica HOM05D005847 ORTHO05D007143 1.7e-29 135.6 511 27.0
TWI81G0154 Tripterygium wilfordii HOM05D005847 ORTHO05D007143 2.2e-29 135.2 509 29.7
Nn8g41240 Nelumbo nucifera HOM05D005847 ORTHO05D007143 2.8e-29 134.8 522 26.2
PGR042G1950 Punica granatum HOM05D005847 ORTHO05D007143 2.8e-29 134.8 497 27.4
Zm00001eb021260 Zea mays HOM05D005847 ORTHO05D007143 2.8e-29 134.8 518 27.0
Actinidia22190 Actinidia chinensis HOM05D005847 ORTHO05D007143 3.7e-29 134.4 527 27.5
CiPaw.11G115200 Carya illinoinensis HOM05D005847 ORTHO05D007143 4.9e-29 134.0 503 28.4
Migut.E00656 Erythranthe guttata HOM05D005847 ORTHO05D007143 4.9e-29 134.0 510 30.8
Thhalv10023366m.g Eutrema salsugineum HOM05D005847 ORTHO05D007143 4.9e-29 134.0 564 27.1
Sp2g00130 Schrenkiella parvula HOM05D005847 ORTHO05D007143 8.3e-29 133.3 523 29.4
ClCG01G001660 Citrullus lanatus HOM05D005847 ORTHO05D007143 1.8e-28 132.1 540 27.4
MBI12_g02092_MAGBIO Magnolia biondii HOM05D005847 ORTHO05D007143 3.1e-28 131.3 516 25.8
Ca_24013_v3 Cicer arietinum L. HOM05D005847 ORTHO05D007143 7.0e-28 130.2 515 27.8
Peaxi162Scf00074g00363 Petunia axillaris HOM05D005847 ORTHO05D007143 7.0e-28 130.2 537 25.0
TAR629G2252 Trochodendron aralioides HOM05D005847 ORTHO05D007143 7.0e-28 130.2 531 25.8
Lalb_Chr13g0298981 Lupinus albus HOM05D005847 ORTHO05D007143 9.1e-28 129.8 537 27.9
SMO119G0297 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.2e-27 129.4 532 29.1
Aqoxy3G00691 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 7.7e-27 126.7 523 27.9
HPP92_003273 Vanilla planifolia HOM05D005847 ORTHO05D007143 7.7e-27 126.7 490 26.1
Aqoxy5G04298 Aquilegia oxysepala HOM05D005847 ORTHO05D007143 1.0e-26 126.3 508 29.5
SMO115G0010 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 1.7e-26 125.6 323 27.9
Aa31LG2G1600 Aethionema arabicum HOM05D005847 ORTHO05D007143 5.0e-26 124.0 520 27.5
Lj1g0001744 Lotus japonicus HOM05D005847 ORTHO05D007143 6.6e-26 123.6 346 29.2
AUR62007027 Chenopodium quinoa HOM05D005847 ORTHO05D007143 8.6e-26 123.2 467 26.3
CSS0040838 Camellia sinensis var. sinensis HOM05D005847 ORTHO05D007143 1.5e-25 122.5 366 30.9
PGSC0003DMG400012250 Solanum tuberosum HOM05D005847 ORTHO05D007143 1.5e-25 122.5 528 25.2
Lsat_1_v5_gn_6_83620 Lactuca sativa HOM05D005847 ORTHO05D007143 2.5e-25 121.7 313 30.7
Nitab4.5_0002728g0010 Nicotiana tabacum HOM05D005847 ORTHO05D007143 5.6e-25 120.6 366 29.8
vmacro11522 Vaccinium macrocarpon HOM05D005847 ORTHO05D007143 4.7e-24 117.5 543 25.0
AUR62019890 Chenopodium quinoa HOM05D005847 ORTHO05D007143 6.1e-24 117.1 348 29.6
arahy.Tifrunner.gnm1.ann1.PR6ST2 Arachis hypogaea HOM05D005847 ORTHO05D007143 1.4e-23 115.9 515 27.4
ATR0757G021 Amborella trichopoda HOM05D005847 ORTHO05D007143 2.3e-23 115.2 476 25.4
arahy.Tifrunner.gnm1.ann1.HI9AVU Arachis hypogaea HOM05D005847 ORTHO05D007143 7.5e-22 110.2 324 29.6
Rhsim02G0249100 Rhododendron simsii HOM05D005847 ORTHO05D007143 1.1e-20 106.3 357 29.7
SGA_v2.0_scaffold159G37696 Striga asiatica HOM05D005847 ORTHO05D007143 2.4e-20 105.1 505 24.4
CBR_g978 Chara braunii HOM05D005847 ORTHO05D007143 5.4e-20 104.0 450 27.6
unitig_21.g20386 Utricularia gibba HOM05D005847 ORTHO05D007143 2.0e-19 102.1 503 24.3
COL.COLO4_10763 Corchorus olitorius HOM05D005847 ORTHO05D007143 1.9e-17 95.5 293 28.0
MSTRG.15574 Avicennia marina HOM05D005847 ORTHO05D007143 5.6e-17 94.0 280 29.3
SMO116G0437 Selaginella moellendorffii HOM05D005847 ORTHO05D007143 2.8e-16 91.7 337 25.8
RcHm_v2.0_Chr7g0186411 Rosa chinensis HOM05D005847 ORTHO05D007143 9.8e-14 83.2 230 29.6
AagrBONN_evm.TU.Sc2ySwM_228.3279 Anthoceros agrestis HOM05D005847 ORTHO05D007143 3.7e-13 81.3 209 30.6
Cre05.g237600 Chlamydomonas reinhardtii HOM05D005847 ORTHO05D007143 2.4e-12 78.6 147 38.8
Sabra01G0063100 Salix brachista HOM05D005847 ORTHO05D007143 6.0e-11 73.9 141 36.2
Ah.12g052990 Amaranthus hybridus HOM05D005847 ORTHO05D007143 2.3e-10 72.0 88 43.2
RcHm_v2.0_Chr7g0186431 Rosa chinensis HOM05D005847 ORTHO05D007143 5.0e-10 70.9 271 26.6
Nitab4.5_0006880g0020 Nicotiana tabacum HOM05D005847 ORTHO05D007143 6.6e-10 70.5 125 37.6
CARHR046320 Cardamine hirsuta HOM05D005847 ORTHO05D007143 1.2e-08 66.2 231 32.5
MSTRG.26906 Avicennia marina HOM05D005847 ORTHO05D007143 2.8e-08 65.1 180 28.9
Cpa.g.sc15.20 Carica papaya HOM05D005847 ORTHO05D007143 2.3e-07 62.0 110 35.5
Nitab4.5_0002027g0040 Nicotiana tabacum HOM05D005847 ORTHO05D007143 2.3e-07 62.0 132 33.3
Oeu058016.1 Olea europaea HOM05D005847 ORTHO05D007143 4.0e-07 61.2 125 30.4
QL10p010267 Quercus lobata HOM05D005847 ORTHO05D007143 9.8e-06 56.6 226 23.9


User provided reference genes

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