Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
MCO09G068 Micromonas commoda HOM05D003297 ORTHO05D004027 2.6e-132 475.3 227 100.0
Os01g0184800 Oryza sativa ssp. japonica HOM05D003297 ORTHO05D004027 2.2e-43 179.9 226 43.4
Nn1g00668 Nelumbo nucifera HOM05D003297 ORTHO05D004027 2.9e-43 179.5 226 43.4
HPP92_005181 Vanilla planifolia HOM05D003297 ORTHO05D004027 5.0e-43 178.7 225 42.2
Lj7A608T45 Lonicera japonica HOM05D003297 ORTHO05D004027 6.5e-43 178.3 226 43.4
MBI15_g24202_MAGBIO Magnolia biondii HOM05D003297 ORTHO05D004027 6.5e-43 178.3 224 41.5
CDE04G3082 Ceratophyllum demersum HOM05D003297 ORTHO05D004027 1.9e-42 176.8 226 40.7
Cre06.g291900 Chlamydomonas reinhardtii HOM05D003297 ORTHO05D004027 1.9e-42 176.8 228 43.0
Haze_14833 Corylus avellana HOM05D003297 ORTHO05D004027 2.5e-42 176.4 226 42.0
ATR1136G208 Amborella trichopoda HOM05D003297 ORTHO05D004027 4.2e-42 175.6 227 42.7
Cfa007254 Carpinus fangiana HOM05D003297 ORTHO05D004027 2.7e-41 172.9 226 41.2
SEGI_15348 Sequoiadendron giganteum HOM05D003297 ORTHO05D004027 2.7e-41 172.9 228 40.4
Actinidia38211 Actinidia chinensis HOM05D003297 ORTHO05D004027 4.7e-41 172.2 226 39.8
Nn3g16636 Nelumbo nucifera HOM05D003297 ORTHO05D004027 8.0e-41 171.4 227 42.3
Sc03g0006810 Simmondsia chinensis HOM05D003297 ORTHO05D004027 8.0e-41 171.4 226 41.2
MSTRG.3093 Avicennia marina HOM05D003297 ORTHO05D004027 1.8e-40 170.2 226 41.6
QL02p072446 Quercus lobata HOM05D003297 ORTHO05D004027 1.8e-40 170.2 226 41.2
Manes.17G106000 Manihot esculenta HOM05D003297 ORTHO05D004027 2.3e-40 169.9 227 41.9
TAR371G0644 Trochodendron aralioides HOM05D003297 ORTHO05D004027 2.3e-40 169.9 224 41.5
CSS0005089 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 5.2e-40 168.7 226 40.3
CSS0009984 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 5.2e-40 168.7 226 40.3
Cpa.g.sc130.8 Carica papaya HOM05D003297 ORTHO05D004027 5.2e-40 168.7 225 42.2
Phvul.010G007000 Phaseolus vulgaris HOM05D003297 ORTHO05D004027 6.7e-40 168.3 212 42.9
Atru.chr6.2513 Acer truncatum HOM05D003297 ORTHO05D004027 1.1e-39 167.5 226 41.2
Cc05_g01780 Coffea canephora HOM05D003297 ORTHO05D004027 1.1e-39 167.5 228 41.2
Cc05_g01790 Coffea canephora HOM05D003297 ORTHO05D004027 1.1e-39 167.5 228 41.2
Aqoxy3G01473 Aquilegia oxysepala HOM05D003297 ORTHO05D004027 1.5e-39 167.2 227 40.5
ClCG08G000860 Citrullus lanatus HOM05D003297 ORTHO05D004027 2.0e-39 166.8 227 40.1
CSS0027121 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 2.6e-39 166.4 226 40.3
Hma1.2p1_0172F.1_g076190 Hydrangea macrophylla HOM05D003297 ORTHO05D004027 2.6e-39 166.4 227 40.5
CiPaw.03G052300 Carya illinoinensis HOM05D003297 ORTHO05D004027 3.3e-39 166.0 226 39.8
CsaV3_3G044040 Cucumis sativus L. HOM05D003297 ORTHO05D004027 3.3e-39 166.0 227 39.6
Dinv25678 Davidia involucrata HOM05D003297 ORTHO05D004027 3.3e-39 166.0 226 39.8
AUR62001824 Chenopodium quinoa HOM05D003297 ORTHO05D004027 4.4e-39 165.6 211 41.7
AUR62009611 Chenopodium quinoa HOM05D003297 ORTHO05D004027 4.4e-39 165.6 211 41.7
Duzib264G0931 Durio zibethinus HOM05D003297 ORTHO05D004027 4.4e-39 165.6 227 41.4
MD09G1015300 Malus domestica HOM05D003297 ORTHO05D004027 4.4e-39 165.6 226 40.3
Sed0027775 Sechium edule HOM05D003297 ORTHO05D004027 5.7e-39 165.2 227 39.6
THA.LOC104822413 Tarenaya hassleriana HOM05D003297 ORTHO05D004027 5.7e-39 165.2 227 40.5
PSO478G3807 Papaver somniferum HOM05D003297 ORTHO05D004027 9.7e-39 164.5 211 42.7
Ciclev10016373m.g Citrus clementina HOM05D003297 ORTHO05D004027 1.7e-38 163.7 226 41.2
Glyma.12G242000 Glycine max HOM05D003297 ORTHO05D004027 1.7e-38 163.7 227 40.1
PSO541G1060 Papaver somniferum HOM05D003297 ORTHO05D004027 1.7e-38 163.7 211 42.7
TWI36G1507 Tripterygium wilfordii HOM05D003297 ORTHO05D004027 1.7e-38 163.7 211 42.7
Prupe.6G027300 Prunus persica HOM05D003297 ORTHO05D004027 2.2e-38 163.3 226 39.8
Aa31LG11G15030 Aethionema arabicum HOM05D003297 ORTHO05D004027 2.8e-38 162.9 227 41.0
Lsat_1_v5_gn_0_14320 Lactuca sativa HOM05D003297 ORTHO05D004027 2.8e-38 162.9 212 42.0
MD17G1015400 Malus domestica HOM05D003297 ORTHO05D004027 2.8e-38 162.9 226 39.8
Nitab4.5_0004643g0030 Nicotiana tabacum HOM05D003297 ORTHO05D004027 2.8e-38 162.9 211 40.8
Rhsim06G0126200 Rhododendron simsii HOM05D003297 ORTHO05D004027 2.8e-38 162.9 227 39.2
Rhsim10G0008800 Rhododendron simsii HOM05D003297 ORTHO05D004027 2.8e-38 162.9 227 39.2
arahy.Tifrunner.gnm1.ann1.G51SBL Arachis hypogaea HOM05D003297 ORTHO05D004027 3.7e-38 162.5 211 43.1
Hund18929 Selenicereus undatus HOM05D003297 ORTHO05D004027 4.8e-38 162.2 226 42.5
HanXRQChr17g0550191 Helianthus annuus HOM05D003297 ORTHO05D004027 6.3e-38 161.8 212 41.5
PGR083G1628 Punica granatum HOM05D003297 ORTHO05D004027 6.3e-38 161.8 227 39.2
vmacro05937 Vaccinium macrocarpon HOM05D003297 ORTHO05D004027 6.3e-38 161.8 240 39.2
arahy.Tifrunner.gnm1.ann1.5QR84K Arachis hypogaea HOM05D003297 ORTHO05D004027 8.2e-38 161.4 211 43.1
Glyma.19G075600 Glycine max HOM05D003297 ORTHO05D004027 8.2e-38 161.4 227 40.1
Gorai.006G040100 Gossypium raimondii HOM05D003297 ORTHO05D004027 8.2e-38 161.4 227 40.5
PSO675G2052 Papaver somniferum HOM05D003297 ORTHO05D004027 8.2e-38 161.4 211 42.2
Gohir.A05G340500 Gossypium hirsutum HOM05D003297 ORTHO05D004027 1.1e-37 161.0 226 40.3
Lj1g0013881 Lotus japonicus HOM05D003297 ORTHO05D004027 1.1e-37 161.0 227 40.1
Sabra16G0215200 Salix brachista HOM05D003297 ORTHO05D004027 1.1e-37 161.0 226 39.8
Gohir.D09G035200 Gossypium hirsutum HOM05D003297 ORTHO05D004027 1.4e-37 160.6 227 41.0
Lj4g0023257 Lotus japonicus HOM05D003297 ORTHO05D004027 1.4e-37 160.6 227 39.6
SMO147G0291 Selaginella moellendorffii HOM05D003297 ORTHO05D004027 1.4e-37 160.6 225 37.3
AagrBONN_evm.TU.Sc2ySwM_368.1649 Anthoceros agrestis HOM05D003297 ORTHO05D004027 1.8e-37 160.2 227 40.1
Lalb_Chr06g0174311 Lupinus albus HOM05D003297 ORTHO05D004027 1.8e-37 160.2 211 41.7
Phvul.004G055600 Phaseolus vulgaris HOM05D003297 ORTHO05D004027 1.8e-37 160.2 211 39.8
DCAR_021763 Daucus carota HOM05D003297 ORTHO05D004027 2.4e-37 159.8 226 37.2
Hund04990 Selenicereus undatus HOM05D003297 ORTHO05D004027 2.4e-37 159.8 226 39.8
Prupe.3G302500 Prunus persica HOM05D003297 ORTHO05D004027 4.1e-37 159.1 224 39.3
Solyc10g078830.2 Solanum lycopersicum HOM05D003297 ORTHO05D004027 4.1e-37 159.1 227 38.3
Sopen10g029470 Solanum pennellii HOM05D003297 ORTHO05D004027 4.1e-37 159.1 227 38.3
PGSC0003DMG400011416 Solanum tuberosum HOM05D003297 ORTHO05D004027 4.1e-37 159.1 227 38.3
C03p07500 Brassica napus HOM05D003297 ORTHO05D004027 7.0e-37 158.3 227 40.1
BraA03t09982Z Brassica rapa HOM05D003297 ORTHO05D004027 7.0e-37 158.3 227 40.1
BcaB01g05299 Brassica carinata HOM05D003297 ORTHO05D004027 9.1e-37 157.9 227 40.1
Lsat_1_v5_gn_2_94421 Lactuca sativa HOM05D003297 ORTHO05D004027 9.1e-37 157.9 226 39.4
GSVIVG01001822001 Vitis vinifera HOM05D003297 ORTHO05D004027 9.1e-37 157.9 226 39.8
AT5G14240 Arabidopsis thaliana HOM05D003297 ORTHO05D004027 1.2e-36 157.5 227 40.1
A03p06500 Brassica napus HOM05D003297 ORTHO05D004027 1.6e-36 157.1 227 39.6
Thecc.04G030000 Theobroma cacao HOM05D003297 ORTHO05D004027 1.6e-36 157.1 227 39.6
AL6G24920 Arabidopsis lyrata HOM05D003297 ORTHO05D004027 2.0e-36 156.8 227 40.1
arahy.Tifrunner.gnm1.ann1.IZLP0D Arachis hypogaea HOM05D003297 ORTHO05D004027 2.0e-36 156.8 213 41.3
Migut.D01746 Erythranthe guttata HOM05D003297 ORTHO05D004027 2.0e-36 156.8 226 38.5
Gorai.012G088800 Gossypium raimondii HOM05D003297 ORTHO05D004027 2.0e-36 156.8 226 40.3
CANSAT64G0772 Cannabis sativa HOM05D003297 ORTHO05D004027 2.6e-36 156.4 227 37.4
CARHR199100 Cardamine hirsuta HOM05D003297 ORTHO05D004027 3.5e-36 156.0 227 39.6
Migut.H00013 Erythranthe guttata HOM05D003297 ORTHO05D004027 3.5e-36 156.0 226 38.5
RcHm_v2.0_Chr3g0477231 Rosa chinensis HOM05D003297 ORTHO05D004027 4.5e-36 155.6 212 41.0
RcHm_v2.0_Chr3g0477241 Rosa chinensis HOM05D003297 ORTHO05D004027 4.5e-36 155.6 211 40.8
BcaB01g06337 Brassica carinata HOM05D003297 ORTHO05D004027 7.7e-36 154.8 227 39.6
Carub.0006s1244 Capsella rubella HOM05D003297 ORTHO05D004027 7.7e-36 154.8 227 39.2
ECA246G0154 Erigeron canadensis HOM05D003297 ORTHO05D004027 1.0e-35 154.5 227 40.5
BolC3t13251H Brassica oleracea HOM05D003297 ORTHO05D004027 1.3e-35 154.1 227 39.6
Sp6g29790 Schrenkiella parvula HOM05D003297 ORTHO05D004027 1.3e-35 154.1 227 39.2
Gohir.D04G078900 Gossypium hirsutum HOM05D003297 ORTHO05D004027 1.7e-35 153.7 226 39.8
Oeu058767.1 Olea europaea HOM05D003297 ORTHO05D004027 1.7e-35 153.7 206 42.7
Nitab4.5_0003600g0020 Nicotiana tabacum HOM05D003297 ORTHO05D004027 2.9e-35 152.9 209 40.2
arahy.Tifrunner.gnm1.ann1.PXFG7S Arachis hypogaea HOM05D003297 ORTHO05D004027 5.0e-35 152.1 207 41.1
Eucgr.J02308 Eucalyptus grandis HOM05D003297 ORTHO05D004027 5.0e-35 152.1 211 40.8
Mapoly0059s0038 Marchantia polymorpha HOM05D003297 ORTHO05D004027 5.0e-35 152.1 227 37.9
Medtr2g034610 Medicago truncatula HOM05D003297 ORTHO05D004027 6.5e-35 151.8 227 37.4
MELO3C022190.2 Cucumis melo HOM05D003297 ORTHO05D004027 8.5e-35 151.4 246 37.4
HanXRQChr15g0474721 Helianthus annuus HOM05D003297 ORTHO05D004027 8.5e-35 151.4 227 37.9
Pp3c2_20640 Physcomitrium patens HOM05D003297 ORTHO05D004027 8.5e-35 151.4 217 37.3
unitig_0.g1941 Utricularia gibba HOM05D003297 ORTHO05D004027 1.1e-34 151.0 235 38.7
Ah.16g107000 Amaranthus hybridus HOM05D003297 ORTHO05D004027 1.9e-34 150.2 260 35.4
Psat1g161760 Pisum sativum HOM05D003297 ORTHO05D004027 1.9e-34 150.2 227 37.0
TPR.G5775 Trifolium pratense HOM05D003297 ORTHO05D004027 1.9e-34 150.2 227 37.9
Peaxi162Scf00304g00127 Petunia axillaris HOM05D003297 ORTHO05D004027 3.2e-34 149.4 229 35.8
BcaB08g36969 Brassica carinata HOM05D003297 ORTHO05D004027 1.2e-33 147.5 227 38.8
A10p24230 Brassica napus HOM05D003297 ORTHO05D004027 2.7e-33 146.4 229 37.1
BraA10t44488Z Brassica rapa HOM05D003297 ORTHO05D004027 2.7e-33 146.4 229 37.1
COL.COLO4_08765 Corchorus olitorius HOM05D003297 ORTHO05D004027 3.6e-33 146.0 227 37.0
BcaC04g19050 Brassica carinata HOM05D003297 ORTHO05D004027 4.7e-33 145.6 227 37.9
C09p62920 Brassica napus HOM05D003297 ORTHO05D004027 6.1e-33 145.2 227 37.9
BolC9t59129H Brassica oleracea HOM05D003297 ORTHO05D004027 6.1e-33 145.2 227 37.9
PSO541G1735 Papaver somniferum HOM05D003297 ORTHO05D004027 6.1e-33 145.2 209 39.7
Thhalv10014458m.g Eutrema salsugineum HOM05D003297 ORTHO05D004027 1.8e-32 143.7 227 37.4
Gohir.A09G034300 Gossypium hirsutum HOM05D003297 ORTHO05D004027 1.2e-28 131.0 227 37.4
Peaxi162Scf00003g04521 Petunia axillaris HOM05D003297 ORTHO05D004027 1.2e-28 131.0 229 32.8
Nitab4.5_0000105g0150 Nicotiana tabacum HOM05D003297 ORTHO05D004027 2.2e-27 126.7 211 34.1
PRCOL_00004862 Prasinoderma coloniale HOM05D003297 ORTHO05D004027 6.5e-27 125.2 219 37.4
SGA_v2.0_scaffold18G08223 Striga asiatica HOM05D003297 ORTHO05D004027 8.5e-27 124.8 208 38.0
HanXRQChr17g0550181 Helianthus annuus HOM05D003297 ORTHO05D004027 5.5e-26 122.1 137 43.8
CARHR103230 Cardamine hirsuta HOM05D003297 ORTHO05D004027 1.6e-25 120.6 161 40.4
Lj5A712T32 Lonicera japonica HOM05D003297 ORTHO05D004027 2.3e-24 116.7 210 34.3
CSS0031371 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 7.5e-23 111.7 211 34.1
Duzib147G0281 Durio zibethinus HOM05D003297 ORTHO05D004027 9.8e-23 111.3 227 34.8
FAN05G2878 Fragaria x ananassa HOM05D003297 ORTHO05D004027 1.7e-22 110.5 124 44.4
FAN05G2899 Fragaria x ananassa HOM05D003297 ORTHO05D004027 1.7e-22 110.5 124 44.4
TAR376G0821 Trochodendron aralioides HOM05D003297 ORTHO05D004027 2.8e-22 109.8 136 41.9
FvH4_6g20890 Fragaria vesca HOM05D003297 ORTHO05D004027 3.7e-22 109.4 124 43.5
FAN14G3337 Fragaria x ananassa HOM05D003297 ORTHO05D004027 8.3e-22 108.2 125 43.2
Potri.017G066200 Populus trichocarpa HOM05D003297 ORTHO05D004027 1.1e-21 107.8 214 33.6
HanXRQChr17g0534591 Helianthus annuus HOM05D003297 ORTHO05D004027 1.4e-21 107.5 123 41.5
Peaxi162Scf00480g00212 Petunia axillaris HOM05D003297 ORTHO05D004027 1.8e-21 107.1 123 43.9
CSS0020533 Camellia sinensis var. sinensis HOM05D003297 ORTHO05D004027 3.5e-20 102.8 119 42.9
CAN.G1161.37 Capsicum annuum HOM05D003297 ORTHO05D004027 1.3e-19 100.9 138 38.4
PSO017G7282 Papaver somniferum HOM05D003297 ORTHO05D004027 2.3e-19 100.1 117 42.7
Lsat_1_v5_gn_1_126600 Lactuca sativa HOM05D003297 ORTHO05D004027 2.9e-19 99.8 142 38.0
HanXRQChr15g0474981 Helianthus annuus HOM05D003297 ORTHO05D004027 6.6e-19 98.6 132 39.4
Zm00001eb121870 Zea mays HOM05D003297 ORTHO05D004027 3.3e-18 96.3 134 40.3
Zm00001eb269870 Zea mays HOM05D003297 ORTHO05D004027 2.8e-17 93.2 158 36.7
SGA_v2.0_scaffold481G52325 Striga asiatica HOM05D003297 ORTHO05D004027 3.6e-17 92.8 208 31.7
Cfa024299 Carpinus fangiana HOM05D003297 ORTHO05D124500 8.0e-17 91.7 208 32.7
EL10Ac9g22681 Beta vulgaris HOM05D003297 ORTHO05D004027 1.2e-15 87.8 211 29.9
Actinidia30893 Actinidia chinensis HOM05D003297 ORTHO05D004027 2.0e-15 87.0 134 35.8
Oeu050424.1 Olea europaea HOM05D003297 ORTHO05D004027 2.9e-14 83.2 100 43.0
Lsat_1_v5_gn_3_133181 Lactuca sativa HOM05D003297 ORTHO05D004027 3.7e-14 82.8 135 35.6
HanXRQChr17g0534631 Helianthus annuus HOM05D003297 ORTHO05D004027 4.1e-13 79.3 97 43.3
Potri.001G334100 Populus trichocarpa HOM05D003297 ORTHO05D004027 4.1e-13 79.3 230 29.1
EL10Ac8g19289 Beta vulgaris HOM05D003297 ORTHO05D004027 2.3e-11 73.6 82 46.3
CDE07G0254 Ceratophyllum demersum HOM05D003297 ORTHO05D004027 3.0e-11 73.2 78 44.9
CDE07G1941 Ceratophyllum demersum HOM05D003297 ORTHO05D004027 6.6e-11 72.0 96 39.6
FAN01G2972 Fragaria x ananassa HOM05D003297 ORTHO05D004027 8.6e-11 71.6 187 31.6
arahy.Tifrunner.gnm1.ann1.GNZ56R Arachis hypogaea HOM05D003297 ORTHO05D004027 4.3e-10 69.3 98 36.7
FAN03G2227 Fragaria x ananassa HOM05D003297 ORTHO05D004027 7.3e-10 68.6 76 44.7
RcHm_v2.0_Chr6g0252661 Rosa chinensis HOM05D003297 ORTHO05D004027 1.2e-09 67.8 63 52.4
Nn1g00078 Nelumbo nucifera HOM05D003297 ORTHO05D004027 2.8e-09 66.6 116 36.2
Sabra17G0062400 Salix brachista HOM05D003297 ORTHO05D004027 3.6e-09 66.2 103 38.8
FAN10G0806 Fragaria x ananassa HOM05D003297 ORTHO05D004027 6.2e-09 65.5 193 29.0
FAN06G2104 Fragaria x ananassa HOM05D003297 ORTHO05D004027 1.8e-08 63.9 62 50.0
arahy.Tifrunner.gnm1.ann1.BJ0JYY Arachis hypogaea HOM05D003297 ORTHO05D004027 2.3e-08 63.5 112 33.9
arahy.Tifrunner.gnm1.ann1.6W6YW6 Arachis hypogaea HOM05D003297 ORTHO05D004027 5.2e-08 62.4 105 33.3
CAN.G1161.54 Capsicum annuum HOM05D000052 ORTHO05D000046 1.5e-07 60.8 69 42.0
Cc00_g35860 Coffea canephora HOM05D003297 ORTHO05D004027 2.6e-07 60.1 89 41.6
Lsat_1_v5_gn_4_110841 Lactuca sativa HOM05D003297 ORTHO05D004027 3.4e-07 59.7 124 28.2
Lsat_1_v5_gn_8_50200 Lactuca sativa HOM05D003846 ORTHO05D004726 3.4e-07 59.7 96 39.6
SGA_v2.0_scaffold857G53675 Striga asiatica HOM05D003297 ORTHO05D004027 5.8e-07 58.9 108 36.1
BcaNung03173 Brassica carinata HOM05D003297 ORTHO05D004027 1.7e-06 57.4 73 43.8
RcHm_v2.0_Chr2g0174741 Rosa chinensis HOM05D003297 ORTHO05D004027 2.2e-06 57.0 157 28.0
RcHm_v2.0_Chr1g0359641 Rosa chinensis HOM05D003297 ORTHO05D004027 3.7e-06 56.2 52 50.0
FAN14G1208 Fragaria x ananassa HOM05D003297 ORTHO05D004027 4.9e-06 55.8 87 37.9
BcaC03g13509 Brassica carinata HOM05D003297 ORTHO05D004027 8.3e-06 55.1 63 47.6


User provided reference genes

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